BLASTX nr result

ID: Lithospermum22_contig00041476 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00041476
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]      78   6e-13
gb|AAS98496.1| unknown protein [Oryza sativa Japonica Group] gi|...    78   8e-13
gb|AAK55448.1|AC069300_3 putative polyprotein [Oryza sativa Japo...    77   1e-12
gb|ABA95319.1| retrotransposon protein, putative, unclassified [...    77   1e-12
emb|CAE05537.2| OSJNBa0053B21.11 [Oryza sativa Japonica Group]         77   1e-12

>gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1475

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 39/78 (50%), Positives = 51/78 (65%)
 Frame = -1

Query: 235  ANEVLEQRRKITKLLKDNLTLAQERMRRYADKKRAERNVEVEDFVYLSL*PYMQNLVELR 56
            A   +E++  I   LK++L  AQ RM+ +ADK R ERN+EV D VYL L PY Q+   +R
Sbjct: 1298 ARVTIEEKEAILNKLKNSLADAQHRMKYFADKNRTERNLEVGDMVYLKLKPYRQSAFGIR 1357

Query: 55   RHLKLAAKFYGPFHILDK 2
              LKL +KFYGPF +L K
Sbjct: 1358 GSLKLRSKFYGPFKVLQK 1375


>gb|AAS98496.1| unknown protein [Oryza sativa Japonica Group]
            gi|50300521|gb|AAT73663.1| hypothetical protein [Oryza
            sativa Japonica Group]
          Length = 915

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 39/80 (48%), Positives = 51/80 (63%)
 Frame = -1

Query: 241  TMANEVLEQRRKITKLLKDNLTLAQERMRRYADKKRAERNVEVEDFVYLSL*PYMQNLVE 62
            T A   LE++  I + LK+NL LAQ+RM+ +ADK R +R  E+ D VYL L PY Q    
Sbjct: 771  TEARVTLEEKEVILQNLKENLELAQKRMKHFADKNRTKRTFEIGDMVYLKLQPYRQTAFG 830

Query: 61   LRRHLKLAAKFYGPFHILDK 2
            +R  LKL +K+YGPF I  K
Sbjct: 831  IRGSLKLRSKYYGPFKITQK 850


>gb|AAK55448.1|AC069300_3 putative polyprotein [Oryza sativa Japonica Group]
            gi|31433481|gb|AAP54986.1| retrotransposon protein,
            putative, unclassified [Oryza sativa Japonica Group]
          Length = 1409

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 38/82 (46%), Positives = 52/82 (63%)
 Frame = -1

Query: 247  VKTMANEVLEQRRKITKLLKDNLTLAQERMRRYADKKRAERNVEVEDFVYLSL*PYMQNL 68
            V   A    EQ+  I + LK +LT AQ RM+ YAD+ R+ER++ V D VY+ L PY Q  
Sbjct: 1326 VSAEARVTTEQKEAILRKLKSSLTEAQRRMKHYADRNRSERSLAVGDMVYIKLQPYRQTA 1385

Query: 67   VELRRHLKLAAKFYGPFHILDK 2
              +R  LKL +KFYGPF +L++
Sbjct: 1386 FGIRGSLKLRSKFYGPFKVLER 1407


>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 955

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 39/82 (47%), Positives = 51/82 (62%)
 Frame = -1

Query: 247  VKTMANEVLEQRRKITKLLKDNLTLAQERMRRYADKKRAERNVEVEDFVYLSL*PYMQNL 68
            V   A   LE++  I + LK ++  AQ RM+ YAD+ R ER +EV D VYL L PY QN 
Sbjct: 774  VSQEARVTLEEKETIVQKLKASMEDAQRRMKYYADRNRTERKLEVGDMVYLKLQPYRQNA 833

Query: 67   VELRRHLKLAAKFYGPFHILDK 2
              +R  LKL  K+YGPF +L+K
Sbjct: 834  FGIRGSLKLRGKYYGPFKVLEK 855


>emb|CAE05537.2| OSJNBa0053B21.11 [Oryza sativa Japonica Group]
          Length = 1251

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 38/82 (46%), Positives = 52/82 (63%)
 Frame = -1

Query: 247  VKTMANEVLEQRRKITKLLKDNLTLAQERMRRYADKKRAERNVEVEDFVYLSL*PYMQNL 68
            V   A   ++QR  +   LK+NL  AQ R++++AD+ R+ER  E+ D VYL + PY  N 
Sbjct: 1104 VSEEARVTVQQREDMLARLKENLAKAQTRIKKFADRLRSERQFELGDMVYLKMQPYRHNA 1163

Query: 67   VELRRHLKLAAKFYGPFHILDK 2
              LR  LKL AKFYGPF +L+K
Sbjct: 1164 FGLRGSLKLRAKFYGPFRVLEK 1185


Top