BLASTX nr result
ID: Lithospermum22_contig00041376
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00041376
(343 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003518955.1| PREDICTED: zinc finger CCCH domain-containin... 158 4e-37
ref|XP_003536245.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ... 156 1e-36
ref|XP_003536892.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ... 154 7e-36
ref|XP_002880326.1| zinc finger (CCCH-type) family protein [Arab... 154 7e-36
ref|XP_003518958.1| PREDICTED: zinc finger CCCH domain-containin... 152 2e-35
>ref|XP_003518955.1| PREDICTED: zinc finger CCCH domain-containing protein 32-like
[Glycine max]
Length = 471
Score = 158 bits (400), Expect = 4e-37
Identities = 68/95 (71%), Positives = 78/95 (82%)
Frame = +1
Query: 1 YNHPHDRSHVEGAVQSRVGEYPERVGEPTCQYYIRTGTCKFGALCKFDHPRNAGGSFNVG 180
YNHP DR+ V AV++ G+YPERVGEP CQYY++TGTCKFGA CKF HP+N GG +
Sbjct: 71 YNHPRDRAAVAAAVRA-TGDYPERVGEPPCQYYLKTGTCKFGASCKFHHPKNGGGYLSQA 129
Query: 181 PLNVYGYPLRPDEKECPYYLQTGQCKFGKTCKFHH 285
PLNVYGYPLRP EKEC YYL+TGQCKFG +CKFHH
Sbjct: 130 PLNVYGYPLRPGEKECSYYLKTGQCKFGISCKFHH 164
Score = 94.7 bits (234), Expect = 7e-18
Identities = 42/75 (56%), Positives = 51/75 (68%)
Frame = +1
Query: 61 YPERVGEPTCQYYIRTGTCKFGALCKFDHPRNAGGSFNVGPLNVYGYPLRPDEKECPYYL 240
YPER GEP CQYY+RTG CKFG C++ HPR+ + + L+ G PLRP + C +YL
Sbjct: 293 YPERPGEPECQYYLRTGDCKFGLACRYHHPRDHIVARPL--LSPVGLPLRPGLQPCAFYL 350
Query: 241 QTGQCKFGKTCKFHH 285
Q G CKFG TCKF H
Sbjct: 351 QNGHCKFGSTCKFDH 365
>ref|XP_003536245.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 32-like [Glycine max]
Length = 494
Score = 156 bits (395), Expect = 1e-36
Identities = 67/95 (70%), Positives = 76/95 (80%)
Frame = +1
Query: 1 YNHPHDRSHVEGAVQSRVGEYPERVGEPTCQYYIRTGTCKFGALCKFDHPRNAGGSFNVG 180
YNHP DR+ V AV+ G+YPERVGEP CQYY++TGTCKFGA CKF HP+N GG
Sbjct: 71 YNHPRDRAAVAAAVRV-TGDYPERVGEPPCQYYLKTGTCKFGASCKFHHPKNGGGYLTQA 129
Query: 181 PLNVYGYPLRPDEKECPYYLQTGQCKFGKTCKFHH 285
PLN+YGYPLRP EKEC YYL+TGQCKFG +CKFHH
Sbjct: 130 PLNIYGYPLRPGEKECSYYLKTGQCKFGISCKFHH 164
Score = 93.6 bits (231), Expect = 2e-17
Identities = 41/75 (54%), Positives = 51/75 (68%)
Frame = +1
Query: 61 YPERVGEPTCQYYIRTGTCKFGALCKFDHPRNAGGSFNVGPLNVYGYPLRPDEKECPYYL 240
+PER GEP CQYY+RTG CKFG C++ HPR+ + + L+ G PLRP + C +YL
Sbjct: 293 FPERPGEPECQYYLRTGDCKFGLACRYHHPRDHIVARPL--LSPVGLPLRPGVQPCAFYL 350
Query: 241 QTGQCKFGKTCKFHH 285
Q G CKFG TCKF H
Sbjct: 351 QNGHCKFGSTCKFDH 365
>ref|XP_003536892.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 32-like [Glycine max]
Length = 473
Score = 154 bits (389), Expect = 7e-36
Identities = 66/95 (69%), Positives = 77/95 (81%)
Frame = +1
Query: 1 YNHPHDRSHVEGAVQSRVGEYPERVGEPTCQYYIRTGTCKFGALCKFDHPRNAGGSFNVG 180
YNHPHDR+ V AV+ G+YPER+GEP CQYY++TGTCKFGA CKF HP+N G +
Sbjct: 72 YNHPHDRAAVVAAVRV-TGDYPERLGEPPCQYYLKTGTCKFGASCKFHHPKNGGEYLSQA 130
Query: 181 PLNVYGYPLRPDEKECPYYLQTGQCKFGKTCKFHH 285
PLNVYGYPLR DEKEC YYL+TGQCK+G +CKFHH
Sbjct: 131 PLNVYGYPLRSDEKECSYYLKTGQCKYGISCKFHH 165
Score = 91.7 bits (226), Expect = 6e-17
Identities = 40/75 (53%), Positives = 51/75 (68%)
Frame = +1
Query: 61 YPERVGEPTCQYYIRTGTCKFGALCKFDHPRNAGGSFNVGPLNVYGYPLRPDEKECPYYL 240
YP+R GEP CQYY+RTG CKFG C++ HP++ + + L+ G PLRP + C +YL
Sbjct: 293 YPKRPGEPDCQYYLRTGDCKFGLACQYHHPQDHVVAQPL--LSPVGLPLRPGLQPCAFYL 350
Query: 241 QTGQCKFGKTCKFHH 285
Q G CKFG TCKF H
Sbjct: 351 QNGHCKFGSTCKFDH 365
>ref|XP_002880326.1| zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp.
lyrata] gi|297326165|gb|EFH56585.1| zinc finger
(CCCH-type) family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 471
Score = 154 bits (389), Expect = 7e-36
Identities = 65/95 (68%), Positives = 78/95 (82%)
Frame = +1
Query: 1 YNHPHDRSHVEGAVQSRVGEYPERVGEPTCQYYIRTGTCKFGALCKFDHPRNAGGSFNVG 180
YNHP DR+ VE AV++ G+YPER+GEP CQ+Y++TGTCKFGA CKF HP+NAGGS
Sbjct: 70 YNHPRDRASVEAAVRA-TGQYPERLGEPPCQFYLKTGTCKFGASCKFHHPKNAGGSMTHV 128
Query: 181 PLNVYGYPLRPDEKECPYYLQTGQCKFGKTCKFHH 285
PLN+YGYP+R + EC YYL+TGQCKFG TCKFHH
Sbjct: 129 PLNIYGYPVREGDNECSYYLKTGQCKFGITCKFHH 163
Score = 94.4 bits (233), Expect = 9e-18
Identities = 41/75 (54%), Positives = 49/75 (65%)
Frame = +1
Query: 61 YPERVGEPTCQYYIRTGTCKFGALCKFDHPRNAGGSFNVGPLNVYGYPLRPDEKECPYYL 240
+PER GEP CQYY++TG CKFG CKF HPR+ L+ G PLRP + C +Y+
Sbjct: 289 FPERPGEPECQYYLKTGDCKFGTSCKFHHPRDRVPPRANCILSPIGLPLRPGVQRCTFYV 348
Query: 241 QTGQCKFGKTCKFHH 285
Q G CKFG TCKF H
Sbjct: 349 QNGFCKFGSTCKFDH 363
>ref|XP_003518958.1| PREDICTED: zinc finger CCCH domain-containing protein 32-like
[Glycine max]
Length = 339
Score = 152 bits (385), Expect = 2e-35
Identities = 65/95 (68%), Positives = 77/95 (81%)
Frame = +1
Query: 1 YNHPHDRSHVEGAVQSRVGEYPERVGEPTCQYYIRTGTCKFGALCKFDHPRNAGGSFNVG 180
+NHP DR+ V AV++ G+YPERVGEP CQYY++TGTCKFGA CKF HP+N GG +
Sbjct: 68 FNHPRDRAAVAAAVRA-TGDYPERVGEPPCQYYLKTGTCKFGASCKFHHPKNGGGYLSQA 126
Query: 181 PLNVYGYPLRPDEKECPYYLQTGQCKFGKTCKFHH 285
PLN+YGYPLR EKEC YYL+TGQCKFG +CKFHH
Sbjct: 127 PLNIYGYPLRLGEKECSYYLKTGQCKFGISCKFHH 161
Score = 61.6 bits (148), Expect = 6e-08
Identities = 29/52 (55%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Frame = +1
Query: 61 YPERVGEPTCQYYIRTGTCKFGALCKFDHPRNAGGSFNVGP-LNVYGYPLRP 213
+PER GEP CQYY+RTG CKFG C++ HPR+ V P L+ G PLRP
Sbjct: 290 FPERPGEPECQYYLRTGDCKFGLACRYHHPRD----HIVAPLLSPVGLPLRP 337