BLASTX nr result

ID: Lithospermum22_contig00041334 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00041334
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316207.1| predicted protein [Populus trichocarpa] gi|2...   113   2e-23
dbj|BAG15872.1| transcription factor [Bruguiera gymnorhiza]           112   4e-23
ref|XP_002314096.1| predicted protein [Populus trichocarpa] gi|2...   111   7e-23
ref|XP_002269430.1| PREDICTED: zinc finger CCCH domain-containin...   109   3e-22
ref|XP_002299802.1| predicted protein [Populus trichocarpa] gi|2...   109   3e-22

>ref|XP_002316207.1| predicted protein [Populus trichocarpa] gi|222865247|gb|EEF02378.1|
           predicted protein [Populus trichocarpa]
          Length = 612

 Score =  113 bits (282), Expect = 2e-23
 Identities = 61/117 (52%), Positives = 80/117 (68%), Gaps = 9/117 (7%)
 Frame = +1

Query: 1   VDVNRPRGSDGATPLHCAVAGGSDKSVEVVRLLIEARSDINSVSANGKKPGDLIVSTDR- 177
           V+VNR  GSD  T LHCAVAGG+D SV VV+LL++A +D NSV  NG KPGDL   + + 
Sbjct: 102 VNVNRVCGSDRVTALHCAVAGGADSSVGVVKLLLDASADPNSVDGNGNKPGDLFAPSSKW 161

Query: 178 ----KRKTLEMLLKGRWGEATEEEAV----KDGKTTLEKKEYPVDVSLPDINSGIYG 324
               ++K +E+LLKG      EEE +    +  +  +EKKEYP+DV+LPDIN+GIYG
Sbjct: 162 LCNSRKKMIELLLKGESLSEDEEEKLIITPQLAREGIEKKEYPLDVTLPDINNGIYG 218


>dbj|BAG15872.1| transcription factor [Bruguiera gymnorhiza]
          Length = 661

 Score =  112 bits (279), Expect = 4e-23
 Identities = 58/116 (50%), Positives = 78/116 (67%), Gaps = 8/116 (6%)
 Frame = +1

Query: 1   VDVNRPRGSDGATPLHCAVAGGSDKSVEVVRLLIEARSDINSVSANGKKPGDLIVST--- 171
           +D+NR  GSD  T LHCAVAGG++ S E V+LL++A +D N V ANG KPGDL +S    
Sbjct: 87  IDINRACGSDKVTALHCAVAGGANSSAETVKLLLDASADANLVDANGNKPGDLTLSLKFS 146

Query: 172 -DRKRKTLEMLLKGRWGEATEEEAVKDG----KTTLEKKEYPVDVSLPDINSGIYG 324
            + ++K +E+LL+G      EEE +       K   EKKEYP+D++LPDIN+GIYG
Sbjct: 147 YNSRKKLIELLLRGESLSKDEEEKLATTPQLMKEGTEKKEYPIDITLPDINNGIYG 202


>ref|XP_002314096.1| predicted protein [Populus trichocarpa] gi|222850504|gb|EEE88051.1|
           predicted protein [Populus trichocarpa]
          Length = 689

 Score =  111 bits (277), Expect = 7e-23
 Identities = 68/133 (51%), Positives = 81/133 (60%), Gaps = 25/133 (18%)
 Frame = +1

Query: 1   VDVNRPRGSDGATPLHCAVAGGSDKSVEVVRLLIEARSDINSVSANGKKPGDLIV----- 165
           VDVNR  GSDGAT LHCA AGGS  + EVVRLL++A +D NSV ANG  PGDLI      
Sbjct: 86  VDVNRGYGSDGATALHCAAAGGSSSAHEVVRLLLDASADPNSVDANGNHPGDLIAPVVES 145

Query: 166 STDRKRKTLEMLLKGRWGEATEEEAV--------KDG------------KTTLEKKEYPV 285
            ++  RKTLE++LKG  G + EE  V         DG            K   EKKEYP+
Sbjct: 146 GSNSTRKTLEIMLKG--GSSGEESCVLAYQIVNEMDGLEQQEISTPRVSKDGHEKKEYPI 203

Query: 286 DVSLPDINSGIYG 324
           D++LPDI +GIYG
Sbjct: 204 DLTLPDIKNGIYG 216


>ref|XP_002269430.1| PREDICTED: zinc finger CCCH domain-containing protein 29-like
           [Vitis vinifera]
          Length = 689

 Score =  109 bits (272), Expect = 3e-22
 Identities = 62/118 (52%), Positives = 76/118 (64%), Gaps = 10/118 (8%)
 Frame = +1

Query: 1   VDVNRPRGSDGATPLHCAVAGGSDKSVEVVRLLIEARSDINSVSANGKKPGDLIV----- 165
           VDVNR  GSD  T LHCA AGGS  S+EVV+LL++A +D N V  NG KP D+I      
Sbjct: 102 VDVNRACGSDQVTALHCAAAGGSVSSLEVVKLLLDASADANCVDCNGNKPVDMIAPALKS 161

Query: 166 STDRKRKTLEMLLKGRWGEATEEE-----AVKDGKTTLEKKEYPVDVSLPDINSGIYG 324
           S + +R+  EMLL+G      EEE     A +  K   EKKEYP+D+SLPDIN+GIYG
Sbjct: 162 SCNSRRRATEMLLRGDQVIELEEEQQPSTAPQLSKEGSEKKEYPIDISLPDINNGIYG 219


>ref|XP_002299802.1| predicted protein [Populus trichocarpa] gi|222847060|gb|EEE84607.1|
           predicted protein [Populus trichocarpa]
          Length = 726

 Score =  109 bits (272), Expect = 3e-22
 Identities = 66/133 (49%), Positives = 81/133 (60%), Gaps = 25/133 (18%)
 Frame = +1

Query: 1   VDVNRPRGSDGATPLHCAVAGGSDKSVEVVRLLIEARSDINSVSANGKKPGDLIV----- 165
           VDVNR  GSDGAT LHCA AGGS  + EV RLL++A +D NSV ANG  PGDLI      
Sbjct: 123 VDVNRGYGSDGATALHCAAAGGSSSAPEVARLLLDASADPNSVDANGNLPGDLIAPVVKS 182

Query: 166 STDRKRKTLEMLLKGRWGEATEEEAV--------KDG------------KTTLEKKEYPV 285
            ++ +RKTLE++LKG  G + EE  V         DG            K   EKKEYP+
Sbjct: 183 GSNSRRKTLEIMLKG--GTSGEETCVLADQIADEMDGMEQQEVPMPRVSKDGSEKKEYPI 240

Query: 286 DVSLPDINSGIYG 324
           D++LPDI +G+YG
Sbjct: 241 DLTLPDIKNGMYG 253


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