BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00041307
         (608 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [V...   257   1e-66
ref|XP_002514998.1| alpha DNA polymerase, putative [Ricinus comm...   248   8e-64
ref|NP_176930.2| DNA polymerase alpha 2 [Arabidopsis thaliana] g...   238   6e-61
dbj|BAC43176.1| putative DNA polymerase alpha subunit [Arabidops...   237   1e-60
ref|XP_002888612.1| DNA polymerase alpha subunit B family [Arabi...   235   5e-60

>ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [Vitis vinifera]
            gi|297738371|emb|CBI27572.3| unnamed protein product
            [Vitis vinifera]
          Length = 623

 Score =  257 bits (656), Expect = 1e-66
 Identities = 125/204 (61%), Positives = 158/204 (77%), Gaps = 2/204 (0%)
 Frame = +3

Query: 3    IKKGSINLTYDEMFQREIIGRLQDYVECMGSTVLVILVPSVRDAHHDFVFPQPPFEVYPS 182
            I+KG+++ ++DE+F  EI+ RLQDYVE MGS   VILVPS+RDA+HDFVFPQP F ++P 
Sbjct: 407  IRKGTVDRSFDEIFHLEILRRLQDYVEYMGSAARVILVPSIRDANHDFVFPQPAFSIHPP 466

Query: 183  EIRHQIHSITNPGTFSANQVNVACCTVDILKQLSAEEISRNAT-GESKHRLTTIANHLWN 359
            +++HQI S+TNPG F AN+V V CCTVD++KQLS E ISRN T G S+ R+TTIANH+ +
Sbjct: 467  DLKHQITSLTNPGMFDANEVKVGCCTVDVIKQLSGEMISRNPTDGSSRDRMTTIANHILS 526

Query: 360  QRSFYPLYPPAEAVPVDFSLAAEVLEXXXXXXXXXXXXXXANFVRVLSVGKINDEEE-IK 536
            QRSFYPLYP AE +P+DFSLA E LE              A+FV+VLS+G  N+ EE +K
Sbjct: 527  QRSFYPLYPLAEGIPLDFSLAPEALEVSTIPDVLILPSDLASFVKVLSLGGRNEGEELVK 586

Query: 537  CICVNPGRLARGEGGGFFVELNFK 608
            CICVNPGRLA+GEGGG FVELN++
Sbjct: 587  CICVNPGRLAKGEGGGHFVELNYQ 610


>ref|XP_002514998.1| alpha DNA polymerase, putative [Ricinus communis]
            gi|223546049|gb|EEF47552.1| alpha DNA polymerase,
            putative [Ricinus communis]
          Length = 621

 Score =  248 bits (632), Expect = 8e-64
 Identities = 118/204 (57%), Positives = 156/204 (76%), Gaps = 2/204 (0%)
 Frame = +3

Query: 3    IKKGSINLTYDEMFQREIIGRLQDYVECMGSTVLVILVPSVRDAHHDFVFPQPPFEVYPS 182
            IKKG+++ ++DE+F++EI+ RLQDYVE MGS   V++VPS RDA+HDFVFPQP F+++ S
Sbjct: 405  IKKGTVDGSFDEIFRQEILRRLQDYVEYMGSDAQVLIVPSTRDANHDFVFPQPAFDIHRS 464

Query: 183  EIRHQIHSITNPGTFSANQVNVACCTVDILKQLSAEEISRNAT-GESKHRLTTIANHLWN 359
             ++HQI S+TNPG F ANQV V CCTVDI+KQL +EE+SRN T G   +R++ +ANH+ +
Sbjct: 465  NLQHQIRSLTNPGIFEANQVRVGCCTVDIIKQLGSEEMSRNPTDGTPSNRMSRLANHILS 524

Query: 360  QRSFYPLYPPAEAVPVDFSLAAEVLEXXXXXXXXXXXXXXANFVRVLSV-GKINDEEEIK 536
            QRSFYPLYPPAE VP+DFSLA E L                 F++VLS+ G+I  EE+ K
Sbjct: 525  QRSFYPLYPPAEDVPLDFSLAPEALHIPSVPHILIVPSDMKYFIKVLSLGGRIEGEEQTK 584

Query: 537  CICVNPGRLARGEGGGFFVELNFK 608
            C+C+NPGRLA+GEGGG FVELN++
Sbjct: 585  CVCINPGRLAKGEGGGTFVELNYR 608


>ref|NP_176930.2| DNA polymerase alpha 2 [Arabidopsis thaliana]
            gi|332196552|gb|AEE34673.1| DNA polymerase alpha 2
            [Arabidopsis thaliana]
          Length = 620

 Score =  238 bits (607), Expect = 6e-61
 Identities = 110/202 (54%), Positives = 153/202 (75%)
 Frame = +3

Query: 3    IKKGSINLTYDEMFQREIIGRLQDYVECMGSTVLVILVPSVRDAHHDFVFPQPPFEVYPS 182
            IKKG+++ T++E+FQ E++ +LQDYVE MGS V V+LVPS+RDA+HDF+FPQPPF+++  
Sbjct: 408  IKKGAVDATFNEIFQVEVLRKLQDYVEFMGSEVRVVLVPSIRDANHDFIFPQPPFDIHIP 467

Query: 183  EIRHQIHSITNPGTFSANQVNVACCTVDILKQLSAEEISRNATGESKHRLTTIANHLWNQ 362
            ++ HQ+ S++NPGTF ANQV V+CCTVD+LKQLS EE+S+N +G    R++ +A+HL  Q
Sbjct: 468  DLEHQMTSLSNPGTFEANQVKVSCCTVDVLKQLSGEEMSKNPSGVPTDRMSRLASHLLRQ 527

Query: 363  RSFYPLYPPAEAVPVDFSLAAEVLEXXXXXXXXXXXXXXANFVRVLSVGKINDEEEIKCI 542
            RSFYPLYPP E++P D SLA + L+                FV++LS+G+  +E+  KC+
Sbjct: 528  RSFYPLYPPPESLPYDSSLAPKALQISSIPDILLLPSDMRYFVKILSLGE--EEDAAKCV 585

Query: 543  CVNPGRLARGEGGGFFVELNFK 608
            CVNPGRLA+GEG G FVEL +K
Sbjct: 586  CVNPGRLAKGEGAGTFVELTYK 607


>dbj|BAC43176.1| putative DNA polymerase alpha subunit [Arabidopsis thaliana]
            gi|29028994|gb|AAO64876.1| At1g67630 [Arabidopsis
            thaliana]
          Length = 620

 Score =  237 bits (604), Expect = 1e-60
 Identities = 109/202 (53%), Positives = 153/202 (75%)
 Frame = +3

Query: 3    IKKGSINLTYDEMFQREIIGRLQDYVECMGSTVLVILVPSVRDAHHDFVFPQPPFEVYPS 182
            IKKG+++ T++E+FQ E++ +LQDYVE MGS V V+LVPS+RDA+HDF+FPQPPF+++  
Sbjct: 408  IKKGAVDATFNEIFQVEVLRKLQDYVEFMGSEVRVVLVPSIRDANHDFIFPQPPFDIHIP 467

Query: 183  EIRHQIHSITNPGTFSANQVNVACCTVDILKQLSAEEISRNATGESKHRLTTIANHLWNQ 362
            ++ HQ+ S++NPGTF ANQV V+CCTVD+LKQLS EE+S+N +G    R++ +A+HL  Q
Sbjct: 468  DLEHQMTSLSNPGTFEANQVKVSCCTVDVLKQLSGEEMSKNPSGVPTDRMSRLASHLLRQ 527

Query: 363  RSFYPLYPPAEAVPVDFSLAAEVLEXXXXXXXXXXXXXXANFVRVLSVGKINDEEEIKCI 542
            RSFYPLYPP E++P D SLA + L+                FV++LS+G+  +E+  KC+
Sbjct: 528  RSFYPLYPPPESLPYDSSLAPKALQISSIPDILLLPSDMRYFVKILSLGE--EEDAAKCV 585

Query: 543  CVNPGRLARGEGGGFFVELNFK 608
            CVNPGRLA+GEG G +VEL +K
Sbjct: 586  CVNPGRLAKGEGAGTYVELTYK 607


>ref|XP_002888612.1| DNA polymerase alpha subunit B family [Arabidopsis lyrata subsp.
            lyrata] gi|297334453|gb|EFH64871.1| DNA polymerase alpha
            subunit B family [Arabidopsis lyrata subsp. lyrata]
          Length = 619

 Score =  235 bits (599), Expect = 5e-60
 Identities = 109/202 (53%), Positives = 150/202 (74%)
 Frame = +3

Query: 3    IKKGSINLTYDEMFQREIIGRLQDYVECMGSTVLVILVPSVRDAHHDFVFPQPPFEVYPS 182
            IKKG+++ T+ E+FQ E++ +L+DYVE MGS V V+LVPS+RDA+HDF+FPQPPF+++  
Sbjct: 407  IKKGAVDATFSEIFQVEVLRKLRDYVEFMGSEVRVVLVPSIRDANHDFIFPQPPFDIHIP 466

Query: 183  EIRHQIHSITNPGTFSANQVNVACCTVDILKQLSAEEISRNATGESKHRLTTIANHLWNQ 362
            ++ HQ+ S++NPGTF ANQV V CCTVD+LKQLS EE+S+N +G    R++ +A+HL  Q
Sbjct: 467  DLEHQMTSLSNPGTFEANQVKVGCCTVDVLKQLSGEEMSKNPSGVPTDRMSRLASHLLRQ 526

Query: 363  RSFYPLYPPAEAVPVDFSLAAEVLEXXXXXXXXXXXXXXANFVRVLSVGKINDEEEIKCI 542
            RSFYPLYPP E++P D SLA + L+                FV++LS+G+  +E   KC+
Sbjct: 527  RSFYPLYPPPESLPYDSSLAPKALQILSIPDILLLPSDMRYFVKILSLGE--EENAAKCV 584

Query: 543  CVNPGRLARGEGGGFFVELNFK 608
            CVNPGRLA+GEG G FVEL +K
Sbjct: 585  CVNPGRLAKGEGAGTFVELTYK 606