BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00041304
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144297.1| PREDICTED: pentatricopeptide repeat-containi...   139   2e-31
ref|XP_002530092.1| pentatricopeptide repeat-containing protein,...   138   5e-31
emb|CBI19924.3| unnamed protein product [Vitis vinifera]              130   1e-28
ref|XP_002279206.1| PREDICTED: pentatricopeptide repeat-containi...   130   1e-28
ref|NP_189286.1| pentatricopeptide repeat-containing protein [Ar...   127   7e-28

>ref|XP_004144297.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g26540-like [Cucumis sativus]
           gi|449521874|ref|XP_004167954.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g26540-like [Cucumis sativus]
          Length = 697

 Score =  139 bits (351), Expect = 2e-31
 Identities = 62/93 (66%), Positives = 81/93 (87%)
 Frame = +3

Query: 3   HLVSFNPTPPVFVLNRAIEAYGKCGYVVDARDLFDEMPQRDGGSWNAVITAYSRNGFYDE 182
           HL +F PTPP+F+LNRAIEAYGKCG + DAR+LFDEMPQRDGGSWNA+ITAY++NG+  E
Sbjct: 84  HLATFCPTPPIFLLNRAIEAYGKCGCLKDARELFDEMPQRDGGSWNAMITAYTQNGYALE 143

Query: 183 AIGVFLDMRRAGVFGSEVTFASVLGSCGSLLEL 281
           A+ ++LD+ ++GV+ +EVT AS+L SCGS+L L
Sbjct: 144 ALNLYLDLNKSGVYATEVTLASILRSCGSVLAL 176



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 30/93 (32%), Positives = 48/93 (51%)
 Frame = +3

Query: 3   HLVSFNPTPPVFVLNRAIEAYGKCGYVVDARDLFDEMPQRDGGSWNAVITAYSRNGFYDE 182
           H+V       V + +  ++ YGKC  + DAR +FDE+  R+  SWN ++  Y   G   E
Sbjct: 185 HIVKCGFVGNVILESSLVDVYGKCRLMNDARSMFDEIQNRNDVSWNVIVRRYLEVGNGKE 244

Query: 183 AIGVFLDMRRAGVFGSEVTFASVLGSCGSLLEL 281
           A+ +F  M R  +  S  TF++ L +C  +  L
Sbjct: 245 AVSMFFQMFRESLMPSSFTFSNALIACSRMAAL 277



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 30/84 (35%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
 Frame = +3

Query: 33  VFVLNRAIEAYGKCGYVVDARDLFDEMPQ-RDGGSWNAVITAYSRNGFYDEAIGVFLDMR 209
           +++ N  ++ YGKCG +  A+  F +M Q RD  SWNA++TA++R+G  ++A+ +F +M 
Sbjct: 428 LYIGNALLDMYGKCGNLKSAKVWFYQMSQWRDKVSWNALLTAHARHGMSEQAMTIFSEM- 486

Query: 210 RAGVFGSEVTFASVLGSCGSLLEL 281
           +     +  TFA++LG+C ++  L
Sbjct: 487 QLETDPNNFTFATLLGACANMFAL 510


>ref|XP_002530092.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530403|gb|EEF32291.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 718

 Score =  138 bits (347), Expect = 5e-31
 Identities = 61/95 (64%), Positives = 80/95 (84%)
 Frame = +3

Query: 3   HLVSFNPTPPVFVLNRAIEAYGKCGYVVDARDLFDEMPQRDGGSWNAVITAYSRNGFYDE 182
           HL++FNPTPP+F+LNRAIE YGKC  + DAR+LFDEMPQRDGGSWNA+I AY++ G+ ++
Sbjct: 82  HLITFNPTPPIFLLNRAIETYGKCECLKDARELFDEMPQRDGGSWNAIIKAYTQCGYAEK 141

Query: 183 AIGVFLDMRRAGVFGSEVTFASVLGSCGSLLELWL 287
           A+G+F DM + GVF +E+TFASVL SC  +L+L L
Sbjct: 142 ALGLFKDMNKEGVFANEITFASVLKSCSDVLDLSL 176


>emb|CBI19924.3| unnamed protein product [Vitis vinifera]
          Length = 912

 Score =  130 bits (327), Expect = 1e-28
 Identities = 57/95 (60%), Positives = 79/95 (83%)
 Frame = +3

Query: 3   HLVSFNPTPPVFVLNRAIEAYGKCGYVVDARDLFDEMPQRDGGSWNAVITAYSRNGFYDE 182
           HL++F+P PP+F+LNRAIE YGKC  + DAR+LF+EMPQRDGGSWNA+ITAY++ G  ++
Sbjct: 85  HLITFSPAPPIFLLNRAIETYGKCSCLDDARELFEEMPQRDGGSWNAMITAYAQGGCAEK 144

Query: 183 AIGVFLDMRRAGVFGSEVTFASVLGSCGSLLELWL 287
           A+ +F  M R G++ +E+TFASVLGSC ++L L+L
Sbjct: 145 ALWLFSRMNRLGIWANEITFASVLGSCATVLALFL 179



 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 27/76 (35%), Positives = 42/76 (55%)
 Frame = +3

Query: 54  IEAYGKCGYVVDARDLFDEMPQRDGGSWNAVITAYSRNGFYDEAIGVFLDMRRAGVFGSE 233
           ++ YGKC  + DAR +FDE+   +  SWN ++  Y   G   EA+ +F  M RA +    
Sbjct: 203 VDIYGKCRVMSDARRMFDEIENPNAISWNVIVRRYLEMGNEKEAVVMFFKMIRANIRPLN 262

Query: 234 VTFASVLGSCGSLLEL 281
            TF++ L +C S+  L
Sbjct: 263 FTFSNALIACSSISAL 278


>ref|XP_002279206.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26540
           [Vitis vinifera]
          Length = 711

 Score =  130 bits (327), Expect = 1e-28
 Identities = 57/95 (60%), Positives = 79/95 (83%)
 Frame = +3

Query: 3   HLVSFNPTPPVFVLNRAIEAYGKCGYVVDARDLFDEMPQRDGGSWNAVITAYSRNGFYDE 182
           HL++F+P PP+F+LNRAIE YGKC  + DAR+LF+EMPQRDGGSWNA+ITAY++ G  ++
Sbjct: 85  HLITFSPAPPIFLLNRAIETYGKCSCLDDARELFEEMPQRDGGSWNAMITAYAQGGCAEK 144

Query: 183 AIGVFLDMRRAGVFGSEVTFASVLGSCGSLLELWL 287
           A+ +F  M R G++ +E+TFASVLGSC ++L L+L
Sbjct: 145 ALWLFSRMNRLGIWANEITFASVLGSCATVLALFL 179



 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 27/76 (35%), Positives = 42/76 (55%)
 Frame = +3

Query: 54  IEAYGKCGYVVDARDLFDEMPQRDGGSWNAVITAYSRNGFYDEAIGVFLDMRRAGVFGSE 233
           ++ YGKC  + DAR +FDE+   +  SWN ++  Y   G   EA+ +F  M RA +    
Sbjct: 203 VDIYGKCRVMSDARRMFDEIENPNAISWNVIVRRYLEMGNEKEAVVMFFKMIRANIRPLN 262

Query: 234 VTFASVLGSCGSLLEL 281
            TF++ L +C S+  L
Sbjct: 263 FTFSNALIACSSISAL 278


>ref|NP_189286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75273843|sp|Q9LRV2.1|PP256_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g26540 gi|9293933|dbj|BAB01836.1| selenium-binding
           protein-like [Arabidopsis thaliana]
           gi|332643655|gb|AEE77176.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 700

 Score =  127 bits (320), Expect = 7e-28
 Identities = 61/95 (64%), Positives = 75/95 (78%)
 Frame = +3

Query: 3   HLVSFNPTPPVFVLNRAIEAYGKCGYVVDARDLFDEMPQRDGGSWNAVITAYSRNGFYDE 182
           HLV+F+P PP+F+LNRAIEAYGKCG V DAR+LF+EMP+RDGGSWNAVITA ++NG  DE
Sbjct: 86  HLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDE 145

Query: 183 AIGVFLDMRRAGVFGSEVTFASVLGSCGSLLELWL 287
              +F  M R GV  +E +FA VL SCG +L+L L
Sbjct: 146 VFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRL 180



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 28/76 (36%), Positives = 40/76 (52%)
 Frame = +3

Query: 54  IEAYGKCGYVVDARDLFDEMPQRDGGSWNAVITAYSRNGFYDEAIGVFLDMRRAGVFGSE 233
           ++ YGKC  + DAR +FDE+      SWN ++  Y   GF DEA+ +F  M    V    
Sbjct: 204 VDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLN 263

Query: 234 VTFASVLGSCGSLLEL 281
            T +SV+ +C   L L
Sbjct: 264 HTVSSVMLACSRSLAL 279