BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00041294
         (546 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containi...   186   3e-45
emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]   186   3e-45
ref|XP_002520950.1| pentatricopeptide repeat-containing protein,...   168   6e-40
ref|XP_003590567.1| Pentatricopeptide repeat-containing protein ...   157   1e-36
ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containi...   153   1e-35

>ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Vitis vinifera]
          Length = 993

 Score =  186 bits (471), Expect = 3e-45
 Identities = 95/181 (52%), Positives = 121/181 (66%)
 Frame = +2

Query: 2   EPLQALELYKEMRLLDFPLDGYSISSILKGCGLIDGLDIGREIHGFATKMGLVDSFFVVN 181
           EPL +LELY+EMR+   PLD  +   ILK CGL+     G E+HG A K G V   FV N
Sbjct: 196 EPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVAN 255

Query: 182 SIVGMYVKCHEIITGVLVFQKLGHIEDVVSWNPIISGYSASGMKFQALEVFHQMCDFGIV 361
           SIVGMY KC+++     +F ++   EDVVSWN +IS YS++G   +AL +F +M    + 
Sbjct: 256 SIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLA 315

Query: 362 PSTYTFVAVLKACEEPEFGKVGRSIHAMLLKSTCYINVYVANALIIMYARTDKMVEADNV 541
           P+TYTFVA L+ACE+  F K G  IHA +LKS+ YINV+VANALI MYAR  KM EA N+
Sbjct: 316 PNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANI 375

Query: 542 F 544
           F
Sbjct: 376 F 376



 Score =  101 bits (252), Expect = 7e-20
 Identities = 60/178 (33%), Positives = 99/178 (55%)
 Frame = +2

Query: 11   QALELYKEMRLLDFPLDGYSISSILKGCGLIDGLDIGREIHGFATKMGLVDSFFVVNSIV 190
            +ALEL++E++L    LD   ISSIL  C  +  +   +EIH +  + GL D   + N IV
Sbjct: 503  RALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLSD-LVLQNGIV 561

Query: 191  GMYVKCHEIITGVLVFQKLGHIEDVVSWNPIISGYSASGMKFQALEVFHQMCDFGIVPST 370
             +Y +C  +     +F+ +   +DVVSW  +IS Y  +G+  +ALE+FH M + G+ P +
Sbjct: 562  DVYGECGNVDYAARMFELI-EFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDS 620

Query: 371  YTFVAVLKACEEPEFGKVGRSIHAMLLKSTCYINVYVANALIIMYARTDKMVEADNVF 544
             + V++L A       K G+ IH  L++    +   +A+ L+ MYAR   + ++ NVF
Sbjct: 621  ISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVF 678



 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 47/181 (25%), Positives = 88/181 (48%)
 Frame = +2

Query: 2   EPLQALELYKEMRLLDFPLDGYSISSILKGCGLIDGLDIGREIHGFATKMGLVDSFFVVN 181
           + ++AL L+ EM+      + Y+  + L+ C     +  G  IH    K     + FV N
Sbjct: 298 QSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVAN 357

Query: 182 SIVGMYVKCHEIITGVLVFQKLGHIEDVVSWNPIISGYSASGMKFQALEVFHQMCDFGIV 361
           +++ MY +  ++     +F  +    D +SWN ++SG+  +G+  +AL+ +H+M D G  
Sbjct: 358 ALIAMYARFGKMGEAANIFYNMDDW-DTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQK 416

Query: 362 PSTYTFVAVLKACEEPEFGKVGRSIHAMLLKSTCYINVYVANALIIMYARTDKMVEADNV 541
           P     ++++ A         G  IHA  +K+    ++ V N+L+ MYA+   M   D +
Sbjct: 417 PDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCI 476

Query: 542 F 544
           F
Sbjct: 477 F 477



 Score = 79.7 bits (195), Expect = 3e-13
 Identities = 53/183 (28%), Positives = 92/183 (50%), Gaps = 2/183 (1%)
 Frame = +2

Query: 2   EPLQAL-ELYKEMRLLDFPLDGYSISSILKGCGLIDGLDIGREIHG-FATKMGLVDSFFV 175
           E  Q+L +L+       F LD  + SS+L+ CG    L  G+++H    T   L +S F+
Sbjct: 94  EAFQSLTDLFANQSPSQFSLDE-AYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFL 152

Query: 176 VNSIVGMYVKCHEIITGVLVFQKLGHIEDVVSWNPIISGYSASGMKFQALEVFHQMCDFG 355
              +V MY KC  ++    +F  + H + + +WN +I  Y  +G    +LE++ +M   G
Sbjct: 153 STRLVFMYGKCGCLVDAEKLFDGMPH-KTIFTWNAMIGAYVTNGEPLGSLELYREMRVSG 211

Query: 356 IVPSTYTFVAVLKACEEPEFGKVGRSIHAMLLKSTCYINVYVANALIIMYARTDKMVEAD 535
           I     TF  +LKAC   +  + G  +H + +K      V+VAN+++ MY + + +  A 
Sbjct: 212 IPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGAR 271

Query: 536 NVF 544
            +F
Sbjct: 272 QLF 274



 Score = 75.1 bits (183), Expect = 7e-12
 Identities = 46/140 (32%), Positives = 69/140 (49%)
 Frame = +2

Query: 11   QALELYKEMRLLDFPLDGYSISSILKGCGLIDGLDIGREIHGFATKMGLVDSFFVVNSIV 190
            +ALEL+  M+      D  S+ SIL     +  L  G+EIHGF  + G V    + +++V
Sbjct: 603  EALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLV 662

Query: 191  GMYVKCHEIITGVLVFQKLGHIEDVVSWNPIISGYSASGMKFQALEVFHQMCDFGIVPST 370
             MY +C  +     VF  + + +D+V W  +I+ Y   G    A+++F +M D  I P  
Sbjct: 663  DMYARCGTLEKSRNVFNFIRN-KDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDH 721

Query: 371  YTFVAVLKACEEPEFGKVGR 430
              FVAVL AC        GR
Sbjct: 722  IAFVAVLYACSHSGLMNEGR 741



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 49/178 (27%), Positives = 85/178 (47%)
 Frame = +2

Query: 11  QALELYKEMRLLDFPLDGYSISSILKGCGLIDGLDIGREIHGFATKMGLVDSFFVVNSIV 190
           +AL+ Y EMR      D  ++ SI+           G +IH +A K GL     V NS+V
Sbjct: 402 EALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLV 461

Query: 191 GMYVKCHEIITGVLVFQKLGHIEDVVSWNPIISGYSASGMKFQALEVFHQMCDFGIVPST 370
            MY K   +     +F K+   +DVVSW  II+G++ +G   +ALE+F ++   GI    
Sbjct: 462 DMYAKFCSMKYMDCIFDKMPD-KDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDV 520

Query: 371 YTFVAVLKACEEPEFGKVGRSIHAMLLKSTCYINVYVANALIIMYARTDKMVEADNVF 544
               ++L AC   +     + IH+ +++     ++ + N ++ +Y     +  A  +F
Sbjct: 521 MMISSILLACSGLKLISSVKEIHSYIIRKG-LSDLVLQNGIVDVYGECGNVDYAARMF 577


>emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
          Length = 957

 Score =  186 bits (471), Expect = 3e-45
 Identities = 95/181 (52%), Positives = 121/181 (66%)
 Frame = +2

Query: 2   EPLQALELYKEMRLLDFPLDGYSISSILKGCGLIDGLDIGREIHGFATKMGLVDSFFVVN 181
           EPL +LELY+EMR+   PLD  +   ILK CGL+     G E+HG A K G V   FV N
Sbjct: 160 EPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVAN 219

Query: 182 SIVGMYVKCHEIITGVLVFQKLGHIEDVVSWNPIISGYSASGMKFQALEVFHQMCDFGIV 361
           SIVGMY KC+++     +F ++   EDVVSWN +IS YS++G   +AL +F +M    + 
Sbjct: 220 SIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLA 279

Query: 362 PSTYTFVAVLKACEEPEFGKVGRSIHAMLLKSTCYINVYVANALIIMYARTDKMVEADNV 541
           P+TYTFVA L+ACE+  F K G  IHA +LKS+ YINV+VANALI MYAR  KM EA N+
Sbjct: 280 PNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANI 339

Query: 542 F 544
           F
Sbjct: 340 F 340



 Score =  101 bits (252), Expect = 7e-20
 Identities = 60/178 (33%), Positives = 99/178 (55%)
 Frame = +2

Query: 11  QALELYKEMRLLDFPLDGYSISSILKGCGLIDGLDIGREIHGFATKMGLVDSFFVVNSIV 190
           +ALEL++E++L    LD   ISSIL  C  +  +   +EIH +  + GL D   + N IV
Sbjct: 467 RALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLSD-LVLQNGIV 525

Query: 191 GMYVKCHEIITGVLVFQKLGHIEDVVSWNPIISGYSASGMKFQALEVFHQMCDFGIVPST 370
            +Y +C  +     +F+ +   +DVVSW  +IS Y  +G+  +ALE+FH M + G+ P +
Sbjct: 526 DVYGECGNVDYAARMFELI-EFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDS 584

Query: 371 YTFVAVLKACEEPEFGKVGRSIHAMLLKSTCYINVYVANALIIMYARTDKMVEADNVF 544
            + V++L A       K G+ IH  L++    +   +A+ L+ MYAR   + ++ NVF
Sbjct: 585 ISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVF 642



 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 47/181 (25%), Positives = 88/181 (48%)
 Frame = +2

Query: 2   EPLQALELYKEMRLLDFPLDGYSISSILKGCGLIDGLDIGREIHGFATKMGLVDSFFVVN 181
           + ++AL L+ EM+      + Y+  + L+ C     +  G  IH    K     + FV N
Sbjct: 262 QSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVAN 321

Query: 182 SIVGMYVKCHEIITGVLVFQKLGHIEDVVSWNPIISGYSASGMKFQALEVFHQMCDFGIV 361
           +++ MY +  ++     +F  +    D +SWN ++SG+  +G+  +AL+ +H+M D G  
Sbjct: 322 ALIAMYARFGKMGEAANIFYNMDDW-DTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQK 380

Query: 362 PSTYTFVAVLKACEEPEFGKVGRSIHAMLLKSTCYINVYVANALIIMYARTDKMVEADNV 541
           P     ++++ A         G  IHA  +K+    ++ V N+L+ MYA+   M   D +
Sbjct: 381 PDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCI 440

Query: 542 F 544
           F
Sbjct: 441 F 441



 Score = 79.7 bits (195), Expect = 3e-13
 Identities = 53/183 (28%), Positives = 92/183 (50%), Gaps = 2/183 (1%)
 Frame = +2

Query: 2   EPLQAL-ELYKEMRLLDFPLDGYSISSILKGCGLIDGLDIGREIHG-FATKMGLVDSFFV 175
           E  Q+L +L+       F LD  + SS+L+ CG    L  G+++H    T   L +S F+
Sbjct: 58  EAFQSLTDLFANQSPSQFSLDE-AYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFL 116

Query: 176 VNSIVGMYVKCHEIITGVLVFQKLGHIEDVVSWNPIISGYSASGMKFQALEVFHQMCDFG 355
              +V MY KC  ++    +F  + H + + +WN +I  Y  +G    +LE++ +M   G
Sbjct: 117 STRLVFMYGKCGCLVDAEKLFDGMPH-KTIFTWNAMIGAYVTNGEPLGSLELYREMRVSG 175

Query: 356 IVPSTYTFVAVLKACEEPEFGKVGRSIHAMLLKSTCYINVYVANALIIMYARTDKMVEAD 535
           I     TF  +LKAC   +  + G  +H + +K      V+VAN+++ MY + + +  A 
Sbjct: 176 IPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGAR 235

Query: 536 NVF 544
            +F
Sbjct: 236 QLF 238



 Score = 75.1 bits (183), Expect = 7e-12
 Identities = 46/140 (32%), Positives = 69/140 (49%)
 Frame = +2

Query: 11  QALELYKEMRLLDFPLDGYSISSILKGCGLIDGLDIGREIHGFATKMGLVDSFFVVNSIV 190
           +ALEL+  M+      D  S+ SIL     +  L  G+EIHGF  + G V    + +++V
Sbjct: 567 EALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLV 626

Query: 191 GMYVKCHEIITGVLVFQKLGHIEDVVSWNPIISGYSASGMKFQALEVFHQMCDFGIVPST 370
            MY +C  +     VF  + + +D+V W  +I+ Y   G    A+++F +M D  I P  
Sbjct: 627 DMYARCGTLEKSRNVFNFIRN-KDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDH 685

Query: 371 YTFVAVLKACEEPEFGKVGR 430
             FVAVL AC        GR
Sbjct: 686 IAFVAVLYACSHSGLMNEGR 705



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 49/178 (27%), Positives = 85/178 (47%)
 Frame = +2

Query: 11  QALELYKEMRLLDFPLDGYSISSILKGCGLIDGLDIGREIHGFATKMGLVDSFFVVNSIV 190
           +AL+ Y EMR      D  ++ SI+           G +IH +A K GL     V NS+V
Sbjct: 366 EALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLV 425

Query: 191 GMYVKCHEIITGVLVFQKLGHIEDVVSWNPIISGYSASGMKFQALEVFHQMCDFGIVPST 370
            MY K   +     +F K+   +DVVSW  II+G++ +G   +ALE+F ++   GI    
Sbjct: 426 DMYAKFCSMKYMDCIFDKMPD-KDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDV 484

Query: 371 YTFVAVLKACEEPEFGKVGRSIHAMLLKSTCYINVYVANALIIMYARTDKMVEADNVF 544
               ++L AC   +     + IH+ +++     ++ + N ++ +Y     +  A  +F
Sbjct: 485 MMISSILLACSGLKLISSVKEIHSYIIRKG-LSDLVLQNGIVDVYGECGNVDYAARMF 541


>ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539787|gb|EEF41367.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 835

 Score =  168 bits (425), Expect = 6e-40
 Identities = 88/181 (48%), Positives = 116/181 (64%)
 Frame = +2

Query: 2   EPLQALELYKEMRLLDFPLDGYSISSILKGCGLIDGLDIGREIHGFATKMGLVDSFFVVN 181
           E L ALE+Y+EMR L    D Y+   +LK CG+++ L  G EIHG A K G     FVVN
Sbjct: 38  EALGALEMYREMRHLGVSFDSYTFPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVN 97

Query: 182 SIVGMYVKCHEIITGVLVFQKLGHIEDVVSWNPIISGYSASGMKFQALEVFHQMCDFGIV 361
           S+V +Y KC++I     +F ++    DVVSWN IIS YS +GM  +AL +F +M   G+V
Sbjct: 98  SLVALYAKCNDINGARKLFDRMYVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVV 157

Query: 362 PSTYTFVAVLKACEEPEFGKVGRSIHAMLLKSTCYINVYVANALIIMYARTDKMVEADNV 541
            +TYTF A L+ACE+  F K+G  IHA +LKS   ++VYVANAL+ MY R  KM EA  +
Sbjct: 158 TNTYTFAAALQACEDSSFIKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVI 217

Query: 542 F 544
           F
Sbjct: 218 F 218



 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 60/179 (33%), Positives = 99/179 (55%)
 Frame = +2

Query: 8   LQALELYKEMRLLDFPLDGYSISSILKGCGLIDGLDIGREIHGFATKMGLVDSFFVVNSI 187
           LQALEL +++++    +D   I SIL  C  ++ L   +EIHG+  + GL D   + N+I
Sbjct: 344 LQALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLSDPV-LQNTI 402

Query: 188 VGMYVKCHEIITGVLVFQKLGHIEDVVSWNPIISGYSASGMKFQALEVFHQMCDFGIVPS 367
           + +Y +C  I   V +F+ +   +DVVSW  +IS Y  +G+  +ALEVF  M + G+ P 
Sbjct: 403 IDVYGECGIIDYAVRIFESI-ECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPD 461

Query: 368 TYTFVAVLKACEEPEFGKVGRSIHAMLLKSTCYINVYVANALIIMYARTDKMVEADNVF 544
             T V++L A       K G+ IH  +++    +   ++N L+ MYAR   + +A  +F
Sbjct: 462 YVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIF 520



 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 47/167 (28%), Positives = 90/167 (53%)
 Frame = +2

Query: 11  QALELYKEMRLLDFPLDGYSISSILKGCGLIDGLDIGREIHGFATKMGLVDSFFVVNSIV 190
           +AL L+ EM       + Y+ ++ L+ C     + +G +IH    K G V   +V N++V
Sbjct: 143 EALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQIHAAILKSGRVLDVYVANALV 202

Query: 191 GMYVKCHEIITGVLVFQKLGHIEDVVSWNPIISGYSASGMKFQALEVFHQMCDFGIVPST 370
            MYV+  ++    ++F  L   +D+V+WN +++G+  +G+  +ALE F+ + +  + P  
Sbjct: 203 AMYVRFGKMPEAAVIFGNLEG-KDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQ 261

Query: 371 YTFVAVLKACEEPEFGKVGRSIHAMLLKSTCYINVYVANALIIMYAR 511
            + ++++ A     +   G+ IHA  +K+    N+ V N LI MYA+
Sbjct: 262 VSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAK 308



 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 37/117 (31%), Positives = 64/117 (54%)
 Frame = +2

Query: 194 MYVKCHEIITGVLVFQKLGHIEDVVSWNPIISGYSASGMKFQALEVFHQMCDFGIVPSTY 373
           MY KC  ++   ++F K+     + +WN ++ GY ++G    ALE++ +M   G+   +Y
Sbjct: 1   MYGKCGSVLDAEMIFDKMSE-RSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSY 59

Query: 374 TFVAVLKACEEPEFGKVGRSIHAMLLKSTCYINVYVANALIIMYARTDKMVEADNVF 544
           TF  +LKAC   E    G  IH + +K  C   V+V N+L+ +YA+ + +  A  +F
Sbjct: 60  TFPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLF 116



 Score = 71.6 bits (174), Expect = 7e-11
 Identities = 42/141 (29%), Positives = 70/141 (49%)
 Frame = +2

Query: 11  QALELYKEMRLLDFPLDGYSISSILKGCGLIDGLDIGREIHGFATKMGLVDSFFVVNSIV 190
           +ALE++  M+      D  ++ SIL     +  L  G+EIHGF  + G +    + N++V
Sbjct: 445 KALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLV 504

Query: 191 GMYVKCHEIITGVLVFQKLGHIEDVVSWNPIISGYSASGMKFQALEVFHQMCDFGIVPST 370
            MY +C  +     +F    +  +++ W  +IS Y   G    A+E+F +M D  I+P  
Sbjct: 505 DMYARCGSVEDAYKIFTCTKN-RNLILWTAMISAYGMHGYGEAAVELFMRMKDEKIIPDH 563

Query: 371 YTFVAVLKACEEPEFGKVGRS 433
            TF+A+L AC        G+S
Sbjct: 564 ITFLALLYACSHSGLVNEGKS 584



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 52/186 (27%), Positives = 87/186 (46%), Gaps = 9/186 (4%)
 Frame = +2

Query: 11  QALELYKEMRLLDFPLDGYSISSILKGCGLIDGLDIGREIHGFATKMGLVDSFFVVNSIV 190
           +ALE + +++  D   D  SI SI+   G +  L  G+EIH +A K G   +  V N+++
Sbjct: 244 EALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLI 303

Query: 191 GMYVKCHEIITGVLVFQKLGHIEDVVSWNPIISGYSASGMKFQALEVFHQMCDFGIVPST 370
            MY KC  +  G   F  + H +D++SW    +GY+ +    QALE+  Q+   G+    
Sbjct: 304 DMYAKCCCMSYGGRAFDLMAH-KDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDA 362

Query: 371 YTFVAVLKACEEPE-FGKVGRSIHAMLLK--------STCYINVYVANALIIMYARTDKM 523
               ++L AC      GK+ + IH   ++            I+VY    +I    R  + 
Sbjct: 363 TMIGSILLACRGLNCLGKI-KEIHGYTIRGGLSDPVLQNTIIDVYGECGIIDYAVRIFES 421

Query: 524 VEADNV 541
           +E  +V
Sbjct: 422 IECKDV 427


>ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355479615|gb|AES60818.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1212

 Score =  157 bits (396), Expect = 1e-36
 Identities = 80/180 (44%), Positives = 114/180 (63%), Gaps = 1/180 (0%)
 Frame = +2

Query: 8   LQALELYKEMRLLDFPLDGYSISSILKGCGLIDGLDIGREIHGFATKMGLVDSFFVVNSI 187
           ++A+ELYKEMR+L   LD ++   +LK CG      +G EIHG A K G     FV N++
Sbjct: 130 VEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNAL 189

Query: 188 VGMYVKCHEIITGVLVFQK-LGHIEDVVSWNPIISGYSASGMKFQALEVFHQMCDFGIVP 364
           + MY KC ++    ++F   L   +D VSWN IIS +   G   +AL +F +M + G+  
Sbjct: 190 IAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVES 249

Query: 365 STYTFVAVLKACEEPEFGKVGRSIHAMLLKSTCYINVYVANALIIMYARTDKMVEADNVF 544
           +TYTFV+ L+ACE P F K+GR IHA++LKS  + +VYV+NALI MYA   +M +A+ VF
Sbjct: 250 NTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVF 309



 Score = 95.1 bits (235), Expect = 6e-18
 Identities = 58/179 (32%), Positives = 95/179 (53%)
 Frame = +2

Query: 8   LQALELYKEMRLLDFPLDGYSISSILKGCGLIDGLDIGREIHGFATKMGLVDSFFVVNSI 187
           L AL L ++++L    +D   I SIL  C  +    + +EIHG+  K GL D   + N+I
Sbjct: 435 LDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGLAD-ILIQNAI 493

Query: 188 VGMYVKCHEIITGVLVFQKLGHIEDVVSWNPIISGYSASGMKFQALEVFHQMCDFGIVPS 367
           V +Y +   +     VF+ +   +D+VSW  +I+    +G+  +ALE+F+ + +  I P 
Sbjct: 494 VNVYGELALVDYARHVFESINS-KDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPD 552

Query: 368 TYTFVAVLKACEEPEFGKVGRSIHAMLLKSTCYINVYVANALIIMYARTDKMVEADNVF 544
             T V+VL A       K G+ IH  L++   ++   +AN+L+ MYAR   M  A N+F
Sbjct: 553 LITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIF 611



 Score = 78.6 bits (192), Expect = 6e-13
 Identities = 48/170 (28%), Positives = 81/170 (47%)
 Frame = +2

Query: 2   EPLQALELYKEMRLLDFPLDGYSISSILKGCGLIDGLDIGREIHGFATKMGLVDSFFVVN 181
           E L+AL L++ M+ +    + Y+  S L+ C     + IGR IH    K       +V N
Sbjct: 231 ESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSN 290

Query: 182 SIVGMYVKCHEIITGVLVFQKLGHIEDVVSWNPIISGYSASGMKFQALEVFHQMCDFGIV 361
           +++ MY  C ++     VF+ +   +D VSWN ++SG   + M   A+  F  M D G  
Sbjct: 291 ALIAMYANCGQMEDAERVFKSM-LFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQK 349

Query: 362 PSTYTFVAVLKACEEPEFGKVGRSIHAMLLKSTCYINVYVANALIIMYAR 511
           P   + + ++ A         G  +HA  +K     N+++ N+LI MY +
Sbjct: 350 PDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGK 399



 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 50/155 (32%), Positives = 77/155 (49%), Gaps = 1/155 (0%)
 Frame = +2

Query: 50  FPLDGYSISSILKGCGLIDGLDIGREIHG-FATKMGLVDSFFVVNSIVGMYVKCHEIITG 226
           FPL   + S  L+ C     L  G+++H  F      +DS F+    V MY KC      
Sbjct: 43  FPLQ-QAYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDA 101

Query: 227 VLVFQKLGHIEDVVSWNPIISGYSASGMKFQALEVFHQMCDFGIVPSTYTFVAVLKACEE 406
           V VF K+     + +WN +I    ++G   +A+E++ +M   G+    +TF  VLKAC  
Sbjct: 102 VKVFDKMSE-RTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGA 160

Query: 407 PEFGKVGRSIHAMLLKSTCYINVYVANALIIMYAR 511
            +  ++G  IH + +K      V+V NALI MYA+
Sbjct: 161 FKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAK 195



 Score = 72.0 bits (175), Expect = 6e-11
 Identities = 45/177 (25%), Positives = 86/177 (48%), Gaps = 2/177 (1%)
 Frame = +2

Query: 8    LQALELYKEMRLLDFPLDGYSISSILKGCGLIDGLDIGREIHGFATKMGLVDSFFVVNSI 187
            ++ALEL+  +   +   D  ++ S+L     +  L  G+EIHGF  + G      + NS+
Sbjct: 535  IEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSL 594

Query: 188  VGMYVKCHEIITGVLVFQKLGHIEDVVSWNPIISGYSASGMKFQALEVFHQMCDFGIVPS 367
            V MY +C  +     +F  +    D++ W  +I+     G    A+++F +M D  ++P 
Sbjct: 595  VDMYARCGTMENARNIFNYVKQ-RDLILWTSMINANGMHGCGKDAIDLFSKMTDENVLPD 653

Query: 368  TYTFVAVLKACEEPEFGKVGRSIHAMLLKSTCYINVYVAN--ALIIMYARTDKMVEA 532
              TF+A+L AC        G+  H  ++K+   +  +  +   L+ + AR++ + EA
Sbjct: 654  HITFLALLYACSHSGLVVEGKQ-HFEIMKNEYKLEPWPEHYACLVDLLARSNSLEEA 709



 Score = 58.9 bits (141), Expect = 5e-07
 Identities = 42/177 (23%), Positives = 85/177 (48%)
 Frame = +2

Query: 14  ALELYKEMRLLDFPLDGYSISSILKGCGLIDGLDIGREIHGFATKMGLVDSFFVVNSIVG 193
           A+  +++M+      D  S+ +++   G    L  G E+H +A K G+  +  + NS++ 
Sbjct: 336 AINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLID 395

Query: 194 MYVKCHEIITGVLVFQKLGHIEDVVSWNPIISGYSASGMKFQALEVFHQMCDFGIVPSTY 373
           MY KC  +      F+ +   +D++SW  II+GY+ +     AL +  ++    +     
Sbjct: 396 MYGKCCCVKYMGSAFEYMPE-KDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPM 454

Query: 374 TFVAVLKACEEPEFGKVGRSIHAMLLKSTCYINVYVANALIIMYARTDKMVEADNVF 544
              ++L AC   +  K+ + IH  +LK     ++ + NA++ +Y     +  A +VF
Sbjct: 455 MIGSILLACSGLKSEKLIKEIHGYVLKGG-LADILIQNAIVNVYGELALVDYARHVF 510


>ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  153 bits (387), Expect = 1e-35
 Identities = 79/180 (43%), Positives = 112/180 (62%), Gaps = 1/180 (0%)
 Frame = +2

Query: 8   LQALELYKEMRLLDFPLDGYSISSILKGCGLIDGLDIGREIHGFATKMGLVDSFFVVNSI 187
           L+A+ELYKEMR+L   +D  +  S+LK CG +    +G EIHG A K G  +  FV N++
Sbjct: 127 LEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGFGEFVFVCNAL 186

Query: 188 VGMYVKCHEIITGVLVFQKLG-HIEDVVSWNPIISGYSASGMKFQALEVFHQMCDFGIVP 364
           + MY KC ++    ++F  +    ED VSWN IIS +   G   +AL +F +M + G+  
Sbjct: 187 IAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVAS 246

Query: 365 STYTFVAVLKACEEPEFGKVGRSIHAMLLKSTCYINVYVANALIIMYARTDKMVEADNVF 544
           +TYTFVA L+  E+P F K+G  IH   LKS  + +VYVANALI MYA+  +M +A+ VF
Sbjct: 247 NTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMYAKCGRMEDAERVF 306



 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 45/167 (26%), Positives = 87/167 (52%)
 Frame = +2

Query: 8   LQALELYKEMRLLDFPLDGYSISSILKGCGLIDGLDIGREIHGFATKMGLVDSFFVVNSI 187
           L+A+ L++++++    +D   I S+L+ C  +   +  REIHG+  K  L D   + N+I
Sbjct: 432 LEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDLAD-IMLQNAI 490

Query: 188 VGMYVKCHEIITGVLVFQKLGHIEDVVSWNPIISGYSASGMKFQALEVFHQMCDFGIVPS 367
           V +Y +          F+ +   +D+VSW  +I+    +G+  +ALE+F+ +    I P 
Sbjct: 491 VNVYGEVGHRDYARRAFESI-RSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPD 549

Query: 368 TYTFVAVLKACEEPEFGKVGRSIHAMLLKSTCYINVYVANALIIMYA 508
           +   ++ L A       K G+ IH  L++   ++   +A++L+ MYA
Sbjct: 550 SIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYA 596



 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 44/146 (30%), Positives = 74/146 (50%)
 Frame = +2

Query: 74  SSILKGCGLIDGLDIGREIHGFATKMGLVDSFFVVNSIVGMYVKCHEIITGVLVFQKLGH 253
           S +L  C  +  L  G+++H    K  L  S F+   ++ MY KC  +   V VF ++  
Sbjct: 50  SLLLDLCVAVKALPQGQQLHARLLKSHL--SAFLATKLLHMYEKCGSLKDAVKVFDEMTE 107

Query: 254 IEDVVSWNPIISGYSASGMKFQALEVFHQMCDFGIVPSTYTFVAVLKACEEPEFGKVGRS 433
              + +WN ++  + +SG   +A+E++ +M   G+     TF +VLKAC      ++G  
Sbjct: 108 -RTIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAE 166

Query: 434 IHAMLLKSTCYINVYVANALIIMYAR 511
           IH + +K      V+V NALI MY +
Sbjct: 167 IHGVAVKCGFGEFVFVCNALIAMYGK 192



 Score = 69.7 bits (169), Expect = 3e-10
 Identities = 45/168 (26%), Positives = 79/168 (47%)
 Frame = +2

Query: 8   LQALELYKEMRLLDFPLDGYSISSILKGCGLIDGLDIGREIHGFATKMGLVDSFFVVNSI 187
           L+AL L++ M+ +    + Y+  + L+G      + +G  IHG A K       +V N++
Sbjct: 230 LEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANAL 289

Query: 188 VGMYVKCHEIITGVLVFQKLGHIEDVVSWNPIISGYSASGMKFQALEVFHQMCDFGIVPS 367
           + MY KC  +     VF  +    D VSWN ++SG   + +   AL  F  M +    P 
Sbjct: 290 IAMYAKCGRMEDAERVFASM-LCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPD 348

Query: 368 TYTFVAVLKACEEPEFGKVGRSIHAMLLKSTCYINVYVANALIIMYAR 511
             + + ++ A         G+ +HA  +++    N+ + N LI MYA+
Sbjct: 349 QVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAK 396



 Score = 69.7 bits (169), Expect = 3e-10
 Identities = 38/132 (28%), Positives = 66/132 (50%)
 Frame = +2

Query: 5   PLQALELYKEMRLLDFPLDGYSISSILKGCGLIDGLDIGREIHGFATKMGLVDSFFVVNS 184
           P++ALEL+  ++  +   D  +I S L     +  L  G+EIHGF  + G      + +S
Sbjct: 531 PVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASS 590

Query: 185 IVGMYVKCHEIITGVLVFQKLGHIEDVVSWNPIISGYSASGMKFQALEVFHQMCDFGIVP 364
           +V MY  C  +     +F  +    D++ W  +I+     G   +A+ +F +M D  ++P
Sbjct: 591 LVDMYACCGTVENSRKMFHSVKQ-RDLILWTSMINANGMHGCGNEAIALFKKMTDENVIP 649

Query: 365 STYTFVAVLKAC 400
              TF+A+L AC
Sbjct: 650 DHITFLALLYAC 661



 Score = 65.9 bits (159), Expect = 4e-09
 Identities = 41/164 (25%), Positives = 83/164 (50%)
 Frame = +2

Query: 14  ALELYKEMRLLDFPLDGYSISSILKGCGLIDGLDIGREIHGFATKMGLVDSFFVVNSIVG 193
           AL  +++M+      D  S+ +++   G    L  G+E+H +A + GL  +  + N+++ 
Sbjct: 333 ALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLID 392

Query: 194 MYVKCHEIITGVLVFQKLGHIEDVVSWNPIISGYSASGMKFQALEVFHQMCDFGIVPSTY 373
           MY KC  +      F+ + H +D++SW  II+GY+ +    +A+ +F ++   G+     
Sbjct: 393 MYAKCCCVKHMGYAFECM-HEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPM 451

Query: 374 TFVAVLKACEEPEFGKVGRSIHAMLLKSTCYINVYVANALIIMY 505
              +VL+AC   +     R IH  + K     ++ + NA++ +Y
Sbjct: 452 MIGSVLRACSGLKSRNFIREIHGYVFKRD-LADIMLQNAIVNVY 494