BLASTX nr result

ID: Lithospermum22_contig00041284 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00041284
         (212 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306988.1| glutamate-gated kainate-type ion channel rec...    97   1e-18
ref|XP_004145549.1| PREDICTED: glutamate receptor 3.3-like [Cucu...    97   1e-18
ref|XP_002301908.1| glutamate-gated kainate-type ion channel rec...    97   2e-18
dbj|BAL15056.1| glutamate receptor 3.3 [Solanum lycopersicum]          93   2e-17
ref|XP_002272859.1| PREDICTED: glutamate receptor 3.3 [Vitis vin...    93   2e-17

>ref|XP_002306988.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222856437|gb|EEE93984.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 897

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 45/70 (64%), Positives = 53/70 (75%)
 Frame = +2

Query: 2   LTSVADSIADFPPEQMDDLQGALVLRQHTADSERKRAFSKKWVKRTAGTLGLSSYGFYAY 181
           L+SV DS +  P E MD +QG LVLRQHT DS+R RAFS +W K T G LGL SYG YAY
Sbjct: 252 LSSVLDSASPLPSETMDSVQGVLVLRQHTPDSDRNRAFSSRWHKLTGGYLGLHSYGLYAY 311

Query: 182 DTVWLVAHAI 211
           D+VWL+AHA+
Sbjct: 312 DSVWLIAHAL 321


>ref|XP_004145549.1| PREDICTED: glutamate receptor 3.3-like [Cucumis sativus]
           gi|449485091|ref|XP_004157067.1| PREDICTED: glutamate
           receptor 3.3-like [Cucumis sativus]
          Length = 918

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 43/70 (61%), Positives = 56/70 (80%)
 Frame = +2

Query: 2   LTSVADSIADFPPEQMDDLQGALVLRQHTADSERKRAFSKKWVKRTAGTLGLSSYGFYAY 181
           LTS+ DS+  FP E M+ +QG L LRQHTA+S++KRAF  +W K T G+LGL++YG YAY
Sbjct: 261 LTSLLDSVVPFPFENMESMQGVLSLRQHTAESDKKRAFLSRWNKLTGGSLGLNTYGLYAY 320

Query: 182 DTVWLVAHAI 211
           D+VW+VAHAI
Sbjct: 321 DSVWMVAHAI 330


>ref|XP_002301908.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222843634|gb|EEE81181.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 859

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 44/70 (62%), Positives = 53/70 (75%)
 Frame = +2

Query: 2   LTSVADSIADFPPEQMDDLQGALVLRQHTADSERKRAFSKKWVKRTAGTLGLSSYGFYAY 181
           L+SV DS +  P E MD +QG L  RQHT DS+RKRAF  +W K T G+LGL+SYG YAY
Sbjct: 253 LSSVLDSASPLPSETMDSIQGVLFFRQHTPDSDRKRAFYSRWRKLTGGSLGLNSYGLYAY 312

Query: 182 DTVWLVAHAI 211
           D+VWL+AHAI
Sbjct: 313 DSVWLIAHAI 322


>dbj|BAL15056.1| glutamate receptor 3.3 [Solanum lycopersicum]
          Length = 808

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 44/70 (62%), Positives = 52/70 (74%)
 Frame = +2

Query: 2   LTSVADSIADFPPEQMDDLQGALVLRQHTADSERKRAFSKKWVKRTAGTLGLSSYGFYAY 181
           LT+V DS    P + MD +QG LVLRQHT +S+ KRAFS +W K T G LGL+SY  +AY
Sbjct: 266 LTTVLDSSPPLPQDTMDTMQGVLVLRQHTPESKNKRAFSSRWNKLTGGLLGLNSYALHAY 325

Query: 182 DTVWLVAHAI 211
           DTVWLVAHAI
Sbjct: 326 DTVWLVAHAI 335


>ref|XP_002272859.1| PREDICTED: glutamate receptor 3.3 [Vitis vinifera]
           gi|297745576|emb|CBI40741.3| unnamed protein product
           [Vitis vinifera]
          Length = 934

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 42/70 (60%), Positives = 54/70 (77%)
 Frame = +2

Query: 2   LTSVADSIADFPPEQMDDLQGALVLRQHTADSERKRAFSKKWVKRTAGTLGLSSYGFYAY 181
           L+SV D+ +    + MD +QG LVLR+HT DS+RKRAF  +W K T G+LGL+SYG YAY
Sbjct: 261 LSSVLDTSSPLASDTMDSMQGVLVLRRHTPDSDRKRAFLSRWKKLTGGSLGLNSYGLYAY 320

Query: 182 DTVWLVAHAI 211
           DTVWL+AHA+
Sbjct: 321 DTVWLLAHAL 330


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