BLASTX nr result
ID: Lithospermum22_contig00041262
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00041262
(441 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002271032.1| PREDICTED: elongation factor Tu, chloroplast... 72 5e-11
ref|XP_002298064.1| predicted protein [Populus trichocarpa] gi|2... 72 5e-11
ref|XP_002304468.1| predicted protein [Populus trichocarpa] gi|2... 72 5e-11
gb|AAK08141.1|AF234537_1 chloroplast translational elongation fa... 71 8e-11
ref|XP_003526993.1| PREDICTED: elongation factor Tu, chloroplast... 71 8e-11
>ref|XP_002271032.1| PREDICTED: elongation factor Tu, chloroplastic-like isoform 1
[Vitis vinifera] gi|359488736|ref|XP_003633809.1|
PREDICTED: elongation factor Tu, chloroplastic-like
isoform 2 [Vitis vinifera]
gi|359488738|ref|XP_003633810.1| PREDICTED: elongation
factor Tu, chloroplastic-like isoform 3 [Vitis vinifera]
Length = 487
Score = 72.0 bits (175), Expect = 5e-11
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = -3
Query: 388 QTECRHYAHVDCPGHA*YVKNMITGAAQMDGAILVV 281
+TE RHYAHVDCPGHA YVKNMITGAAQMDGAILVV
Sbjct: 149 ETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVV 184
Score = 56.2 bits (134), Expect(2) = 1e-06
Identities = 51/148 (34%), Positives = 58/148 (39%), Gaps = 15/148 (10%)
Frame = -1
Query: 420 GITINTATVEYRLS---------------VDIMPTSTALVMPSM*KI*LLELPKWMVPFW 286
GITINTATVEY V M T A ++ ++
Sbjct: 138 GITINTATVEYETESRHYAHVDCPGHADYVKNMITGAA------------QMDGAILVVS 185
Query: 285 LFDGPMPRTKEDILLAKQVGVPNMVVFLNXXXXXXXXXXXXXXXXXXXXXXXXVFLNKQD 106
DGPMP+TKE ILLAKQVGVPNMV VFLNKQD
Sbjct: 186 GADGPMPQTKEHILLAKQVGVPNMV----------------------------VFLNKQD 217
Query: 105 QXXXXXXXXXXXXXXXXXLSSYEIPGDE 22
Q L+SYE PGD+
Sbjct: 218 QVDDEELLQLVELEVRELLASYEFPGDD 245
Score = 20.8 bits (42), Expect(2) = 1e-06
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -2
Query: 32 PGTNIPIVSG 3
PG +IPIVSG
Sbjct: 242 PGDDIPIVSG 251
>ref|XP_002298064.1| predicted protein [Populus trichocarpa] gi|222845322|gb|EEE82869.1|
predicted protein [Populus trichocarpa]
Length = 483
Score = 72.0 bits (175), Expect = 5e-11
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = -3
Query: 388 QTECRHYAHVDCPGHA*YVKNMITGAAQMDGAILVV 281
+TE RHYAHVDCPGHA YVKNMITGAAQMDGAILVV
Sbjct: 145 ETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVV 180
Score = 57.4 bits (137), Expect(2) = 8e-07
Identities = 52/148 (35%), Positives = 58/148 (39%), Gaps = 15/148 (10%)
Frame = -1
Query: 420 GITINTATVEYRLS---------------VDIMPTSTALVMPSM*KI*LLELPKWMVPFW 286
GITINTATVEY V M T A ++ ++
Sbjct: 134 GITINTATVEYETESRHYAHVDCPGHADYVKNMITGAA------------QMDGAILVVS 181
Query: 285 LFDGPMPRTKEDILLAKQVGVPNMVVFLNXXXXXXXXXXXXXXXXXXXXXXXXVFLNKQD 106
DGPMP+TKE ILLAKQVGVPNMV VFLNKQD
Sbjct: 182 GADGPMPQTKEHILLAKQVGVPNMV----------------------------VFLNKQD 213
Query: 105 QXXXXXXXXXXXXXXXXXLSSYEIPGDE 22
Q LSSYE PGD+
Sbjct: 214 QVDDEELLQLVELEVRELLSSYEFPGDD 241
Score = 20.4 bits (41), Expect(2) = 8e-07
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -2
Query: 32 PGTNIPIVSG 3
PG +IPI+SG
Sbjct: 238 PGDDIPIISG 247
>ref|XP_002304468.1| predicted protein [Populus trichocarpa] gi|222841900|gb|EEE79447.1|
predicted protein [Populus trichocarpa]
Length = 425
Score = 72.0 bits (175), Expect = 5e-11
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = -3
Query: 388 QTECRHYAHVDCPGHA*YVKNMITGAAQMDGAILVV 281
+TE RHYAHVDCPGHA YVKNMITGAAQMDGAILVV
Sbjct: 87 ETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVV 122
Score = 57.4 bits (137), Expect(2) = 8e-07
Identities = 52/148 (35%), Positives = 58/148 (39%), Gaps = 15/148 (10%)
Frame = -1
Query: 420 GITINTATVEYRLS---------------VDIMPTSTALVMPSM*KI*LLELPKWMVPFW 286
GITINTATVEY V M T A ++ ++
Sbjct: 76 GITINTATVEYETESRHYAHVDCPGHADYVKNMITGAA------------QMDGAILVVS 123
Query: 285 LFDGPMPRTKEDILLAKQVGVPNMVVFLNXXXXXXXXXXXXXXXXXXXXXXXXVFLNKQD 106
DGPMP+TKE ILLAKQVGVPNMV VFLNKQD
Sbjct: 124 GADGPMPQTKEHILLAKQVGVPNMV----------------------------VFLNKQD 155
Query: 105 QXXXXXXXXXXXXXXXXXLSSYEIPGDE 22
Q LSSYE PGD+
Sbjct: 156 QVDDEELLQLVELEVRELLSSYEFPGDD 183
Score = 20.4 bits (41), Expect(2) = 8e-07
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -2
Query: 32 PGTNIPIVSG 3
PG +IPI+SG
Sbjct: 180 PGDDIPIISG 189
>gb|AAK08141.1|AF234537_1 chloroplast translational elongation factor Tu [Pelargonium
graveolens]
Length = 474
Score = 71.2 bits (173), Expect = 8e-11
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = -3
Query: 388 QTECRHYAHVDCPGHA*YVKNMITGAAQMDGAILVV 281
+TE RHYAHVDCPGHA YVKNMITGAAQMDGAILVV
Sbjct: 136 ETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVV 171
Score = 57.4 bits (137), Expect = 1e-06
Identities = 52/148 (35%), Positives = 58/148 (39%), Gaps = 15/148 (10%)
Frame = -1
Query: 420 GITINTATVEYRLS---------------VDIMPTSTALVMPSM*KI*LLELPKWMVPFW 286
GITINTATVEY V M T A ++ ++
Sbjct: 125 GITINTATVEYETENRHYAHVDCPGHADYVKNMITGAA------------QMDGAILVVS 172
Query: 285 LFDGPMPRTKEDILLAKQVGVPNMVVFLNXXXXXXXXXXXXXXXXXXXXXXXXVFLNKQD 106
DGPMP+TKE ILLAKQVGVPNMV VFLNKQD
Sbjct: 173 GADGPMPQTKEHILLAKQVGVPNMV----------------------------VFLNKQD 204
Query: 105 QXXXXXXXXXXXXXXXXXLSSYEIPGDE 22
Q LS+YE PGDE
Sbjct: 205 QVDDEELLELVELEVRELLSAYEFPGDE 232
>ref|XP_003526993.1| PREDICTED: elongation factor Tu, chloroplastic-like [Glycine max]
Length = 479
Score = 71.2 bits (173), Expect = 8e-11
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = -3
Query: 388 QTECRHYAHVDCPGHA*YVKNMITGAAQMDGAILVV 281
+TE RHYAHVDCPGHA YVKNMITGAAQMDGAILVV
Sbjct: 141 ETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVV 176
Score = 57.4 bits (137), Expect = 1e-06
Identities = 52/148 (35%), Positives = 58/148 (39%), Gaps = 15/148 (10%)
Frame = -1
Query: 420 GITINTATVEYRLS---------------VDIMPTSTALVMPSM*KI*LLELPKWMVPFW 286
GITINTATVEY V M T A ++ ++
Sbjct: 130 GITINTATVEYETENRHYAHVDCPGHADYVKNMITGAA------------QMDGAILVVS 177
Query: 285 LFDGPMPRTKEDILLAKQVGVPNMVVFLNXXXXXXXXXXXXXXXXXXXXXXXXVFLNKQD 106
DGPMP+TKE ILLAKQVGVPNMV VFLNKQD
Sbjct: 178 GADGPMPQTKEHILLAKQVGVPNMV----------------------------VFLNKQD 209
Query: 105 QXXXXXXXXXXXXXXXXXLSSYEIPGDE 22
Q LSSYE PGD+
Sbjct: 210 QVDDEELLQLVELEVRDLLSSYEFPGDD 237