BLASTX nr result

ID: Lithospermum22_contig00041261 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00041261
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524579.1| ubiquitin-protein ligase, putative [Ricinus ...    44   8e-06

>ref|XP_002524579.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223536132|gb|EEF37787.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 389

 Score = 44.3 bits (103), Expect(2) = 8e-06
 Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
 Frame = +2

Query: 23  YGPPLQNLHLDCCFGIIDHRISFIFLRLSFGNC*SL-PVHYSMFGLHMLSIACTTVRNAT 199
           YG  L +LHLDCCFG+ D+ +S I     +    SL   + +  GL  L+  C+ ++   
Sbjct: 112 YGSRLHSLHLDCCFGLTDNGLSLITSGCPYLTVISLYRCNITDIGLETLANGCSALKQIN 171

Query: 200 LSYFP 214
           LSY P
Sbjct: 172 LSYCP 176



 Score = 30.0 bits (66), Expect(2) = 8e-06
 Identities = 16/33 (48%), Positives = 21/33 (63%)
 Frame = +1

Query: 259 KVSDFQIIYGIGF*IRSPLLPIIEADSCNLKRK 357
           K+S  + I G+GF   SP L  I+A+SCNL  K
Sbjct: 197 KISCCREISGVGFTGCSPTLAYIDAESCNLDPK 229


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