BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00041256
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD15471.1| putative non-LTR retroelement reverse transcripta...    60   1e-07
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal...    60   2e-07
gb|ABE65398.1| hypothetical protein At1g43570 [Arabidopsis thali...    58   9e-07
gb|ABK28140.1| unknown [Arabidopsis thaliana]                          58   9e-07
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                 57   1e-06

>gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1277

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
 Frame = +3

Query: 3    LACMAKHVWDLCIEKKALWFKWINTVRLKGQSF*GIHGRS-VDSWV*KKLLTLRESLKGH 179
            ++C+ K +W L   + +LW  W+ T  ++  SF   + RS + SW+ KKLL  R+  K  
Sbjct: 1027 VSCL-KLIWRLVSRQSSLWVNWVWTYIIRKGSFWSANDRSSLGSWMWKKLLNYRDVAKSM 1085

Query: 180  VKYNVESGTSVKCLHDNWSVVRVMADVLSYR 272
             K  ++SG+S    +DNWS +R + DV + R
Sbjct: 1086 CKVEIKSGSSTSFWYDNWSQLRQLVDVTNAR 1116


>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
           gi|7267919|emb|CAB78261.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 662

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 29/88 (32%), Positives = 45/88 (51%)
 Frame = +3

Query: 9   CMAKHVWDLCIEKKALWFKWINTVRLKGQSF*GIHGRSVDSWV*KKLLTLRESLKGHVKY 188
           C  K +W +  +  +LW +WI T  LK  +F      S  SW+ KKLL  R++ K   K 
Sbjct: 404 CCLKLIWRIVSQGDSLWVQWIRTYLLKRNTFWSFRSASQGSWMWKKLLKYRDTAKAFSKV 463

Query: 189 NVESGTSVKCLHDNWSVVRVMADVLSYR 272
           ++ +G +    +D+WS    + DVL  R
Sbjct: 464 DIRNGETASFWYDDWSSKGRLIDVLGER 491


>gb|ABE65398.1| hypothetical protein At1g43570 [Arabidopsis thaliana]
          Length = 348

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
 Frame = +3

Query: 9   CMAKHVWDLCIEKKALWFKWINTVRLKGQSF*GIHGRSVD-SWV*KKLLTLRESLKGHVK 185
           C  K +W L   + +LW +W+ T  ++  +F  I   S   SW+ +KLLTLR+  +   K
Sbjct: 110 CGLKLIWRLLASQTSLWGQWVQTYLIRRNNFWAIKASSYQGSWMWRKLLTLRDVARSFHK 169

Query: 186 YNVESGTSVKCLHDNWSVVRVMADVLSYRDVSNLCMLPT 302
             + +G +    +D+WS +  + DVL  R   +L +  T
Sbjct: 170 KEIHNGRNTSFWYDHWSSMGTLVDVLGARGCIDLGITTT 208


>gb|ABK28140.1| unknown [Arabidopsis thaliana]
          Length = 349

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
 Frame = +3

Query: 9   CMAKHVWDLCIEKKALWFKWINTVRLKGQSF*GIHGRSVD-SWV*KKLLTLRESLKGHVK 185
           C  K +W L   + +LW +W+ T  ++  +F  I   S   SW+ +KLLTLR+  +   K
Sbjct: 110 CGLKLIWRLLASQTSLWGQWVQTYLIRRNNFWAIKASSYQGSWMWRKLLTLRDVARSFHK 169

Query: 186 YNVESGTSVKCLHDNWSVVRVMADVLSYRDVSNLCMLPT 302
             + +G +    +D+WS +  + DVL  R   +L +  T
Sbjct: 170 KEIHNGRNTSFWYDHWSSMGTLVDVLGARGCIDLGITTT 208


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
 Frame = +3

Query: 3   LACMAKHVWDLCIEKKALWFKWINTVRLKGQSF*GIHGRS-VDSWV*KKLLTLRESLKGH 179
           ++C+ K +W L   + +LW  W+ T  ++  SF   + RS + SW+ KKLL  R+  K  
Sbjct: 458 VSCL-KLIWRLVSRQSSLWVNWVWTYIIRKGSFWSANDRSSLGSWMWKKLLKYRDVAKSM 516

Query: 180 VKYNVESGTSVKCLHDNWSVVRVMADVLSYR 272
            K  ++SG+S    +DNWS +  + DV + R
Sbjct: 517 CKVEIKSGSSTSFWYDNWSQLGQLVDVTNAR 547