BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00041248
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309169.1| predicted protein [Populus trichocarpa] gi|2...   175   4e-42
ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat...   174   5e-42
ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat...   174   5e-42
ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat...   173   1e-41
ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat...   173   1e-41

>ref|XP_002309169.1| predicted protein [Populus trichocarpa] gi|222855145|gb|EEE92692.1|
           predicted protein [Populus trichocarpa]
          Length = 619

 Score =  175 bits (443), Expect = 4e-42
 Identities = 84/160 (52%), Positives = 117/160 (73%)
 Frame = +2

Query: 23  SLNYLKHLHACLLRTNLHQDTYLVNILLKSTLNVFHKPLYASLIFNQTHNPNIFLYNTLL 202
           SL +LKH+HA LLR  L +D+YL+N +L+ + N F    Y+  IF+QT  PNIFL+NT++
Sbjct: 22  SLKHLKHVHAALLRLGLDEDSYLLNKVLRFSFN-FGNTNYSHRIFHQTKEPNIFLFNTMI 80

Query: 203 RGLVANNCFIQCVNVFKKMRGKQQMLPDNFTLPFVLKACVHVLDFVLGVQVHGIVLKIGL 382
            GLV N+ F + + ++  MR K+ + PD+FT PF+LKAC  +LD  LG+++HG+V+K G 
Sbjct: 81  HGLVLNDSFQESIEIYHSMR-KEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAGC 139

Query: 383 EKDVFVKTGLVSLYGKCGELRDAEKVFDDIPQRNVVSWTA 502
           E D FV T LVSLYGKCG + +A KVFDDIP++NV +WTA
Sbjct: 140 ESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTA 179


>ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Glycine max]
          Length = 676

 Score =  174 bits (442), Expect = 5e-42
 Identities = 90/161 (55%), Positives = 117/161 (72%), Gaps = 1/161 (0%)
 Frame = +2

Query: 23  SLNYLKHLHACLLRTNLHQDTYLVNILLKSTLNVFHKPLYASLIFNQTHNPNIFLYNTLL 202
           SL+  K  H  LLR  LHQDTYL+N+LL+S+L+ F    YA+++F QT +PNIFLYNTL+
Sbjct: 15  SLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLH-FAATQYATVVFAQTPHPNIFLYNTLI 73

Query: 203 RGLVANNCFIQCVNVFKKMRGKQQMLPDNFTLPFVLKACVHVLD-FVLGVQVHGIVLKIG 379
           RG+V+N+ F   V+V+  MR +    PDNFT PFVLKAC  +   F +G+ +H +V+K G
Sbjct: 74  RGMVSNDAFRDAVSVYASMR-QHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTG 132

Query: 380 LEKDVFVKTGLVSLYGKCGELRDAEKVFDDIPQRNVVSWTA 502
            + DVFVKTGLV LY K G L DA KVFD+IP++NVVSWTA
Sbjct: 133 FDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTA 173



 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 44/154 (28%), Positives = 84/154 (54%), Gaps = 1/154 (0%)
 Frame = +2

Query: 44  LHACLLRTNLHQDTYL-VNILLKSTLNVFHKPLYASLIFNQTHNPNIFLYNTLLRGLVAN 220
           LH+ +++T    D ++   ++   + N F     A  +F++    N+  +  ++ G + +
Sbjct: 124 LHSLVIKTGFDWDVFVKTGLVCLYSKNGFLTD--ARKVFDEIPEKNVVSWTAIICGYIES 181

Query: 221 NCFIQCVNVFKKMRGKQQMLPDNFTLPFVLKACVHVLDFVLGVQVHGIVLKIGLEKDVFV 400
            CF + + +F+ +  +  + PD+FTL  +L AC  V D   G  + G + + G   +VFV
Sbjct: 182 GCFGEALGLFRGLL-EMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFV 240

Query: 401 KTGLVSLYGKCGELRDAEKVFDDIPQRNVVSWTA 502
            T LV +Y KCG + +A +VFD + +++VV W+A
Sbjct: 241 ATSLVDMYAKCGSMEEARRVFDGMVEKDVVCWSA 274


>ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Vitis vinifera]
          Length = 686

 Score =  174 bits (442), Expect = 5e-42
 Identities = 87/160 (54%), Positives = 112/160 (70%)
 Frame = +2

Query: 23  SLNYLKHLHACLLRTNLHQDTYLVNILLKSTLNVFHKPLYASLIFNQTHNPNIFLYNTLL 202
           S  +LKHLHA LLR  L  D YL+N++L+ + + F    Y   +F+Q   PNIFL+NT++
Sbjct: 26  SFKHLKHLHAHLLRFGLCHDNYLLNMILRCSFD-FSDTNYTRFLFHQIKQPNIFLWNTMI 84

Query: 203 RGLVANNCFIQCVNVFKKMRGKQQMLPDNFTLPFVLKACVHVLDFVLGVQVHGIVLKIGL 382
           RGLV+N+CF   +  +  MR  +  LP+NFT PFVLKAC  +LD  LGV++H +V+K G 
Sbjct: 85  RGLVSNDCFDDAIEFYGLMRS-EGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGF 143

Query: 383 EKDVFVKTGLVSLYGKCGELRDAEKVFDDIPQRNVVSWTA 502
           + DVFVKT LV LY KCG L DA KVFDDIP +NVVSWTA
Sbjct: 144 DCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTA 183



 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 37/120 (30%), Positives = 72/120 (60%)
 Frame = +2

Query: 143 ASLIFNQTHNPNIFLYNTLLRGLVANNCFIQCVNVFKKMRGKQQMLPDNFTLPFVLKACV 322
           A  +F+   + N+  +  ++ G +    F + +++F+++  +  + PD+FT+  VL AC 
Sbjct: 166 AHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLL-EMNLAPDSFTIVRVLSACT 224

Query: 323 HVLDFVLGVQVHGIVLKIGLEKDVFVKTGLVSLYGKCGELRDAEKVFDDIPQRNVVSWTA 502
            + D   G  +H  ++++G+ ++VFV T LV +Y KCG +  A  VFD +P++++VSW A
Sbjct: 225 QLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGA 284



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 37/159 (23%), Positives = 78/159 (49%)
 Frame = +2

Query: 26  LNYLKHLHACLLRTNLHQDTYLVNILLKSTLNVFHKPLYASLIFNQTHNPNIFLYNTLLR 205
           LN  + +H C++   + ++ ++   L+       +     S +F+     +I  +  +++
Sbjct: 229 LNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARS-VFDGMPEKDIVSWGAMIQ 287

Query: 206 GLVANNCFIQCVNVFKKMRGKQQMLPDNFTLPFVLKACVHVLDFVLGVQVHGIVLKIGLE 385
           G   N    + +++F +M+ ++ + PD +T+  VL AC  +    LG  V G+V +    
Sbjct: 288 GYALNGLPKEAIDLFLQMQ-RENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFL 346

Query: 386 KDVFVKTGLVSLYGKCGELRDAEKVFDDIPQRNVVSWTA 502
            +  + T L+ LY KCG +  A +VF  + +++ V W A
Sbjct: 347 YNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNA 385


>ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Cucumis sativus]
          Length = 688

 Score =  173 bits (438), Expect = 1e-41
 Identities = 85/158 (53%), Positives = 114/158 (72%)
 Frame = +2

Query: 29  NYLKHLHACLLRTNLHQDTYLVNILLKSTLNVFHKPLYASLIFNQTHNPNIFLYNTLLRG 208
           N LKH+HA LLR +L QD YL+N++L   L+ F    Y+ L+F+Q   PNIFL+NT++RG
Sbjct: 30  NQLKHIHARLLRLHLDQDNYLLNLILCCALD-FGSTNYSKLVFSQVKEPNIFLWNTMIRG 88

Query: 209 LVANNCFIQCVNVFKKMRGKQQMLPDNFTLPFVLKACVHVLDFVLGVQVHGIVLKIGLEK 388
           LV+ +CF   ++++  MRG    LP+NFT+PFVLKAC   LD  LG+++H +++K G + 
Sbjct: 89  LVSKDCFDDAIHLYGSMRGGG-FLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDH 147

Query: 389 DVFVKTGLVSLYGKCGELRDAEKVFDDIPQRNVVSWTA 502
           DVFVKT L+SLY KC    DA KVFDDIP +NVVSWTA
Sbjct: 148 DVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTA 185



 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 40/152 (26%), Positives = 80/152 (52%)
 Frame = +2

Query: 44  LHACLLRTNLHQDTYLVNILLKSTLNVFHKPLYASLIFNQTHNPNIFLYNTLLRGLVANN 223
           +H+ L++     D ++   LL   +   +    A  +F+   + N+  +  ++ G +++ 
Sbjct: 136 IHSLLVKAGYDHDVFVKTSLLSLYVKCDNFD-DALKVFDDIPDKNVVSWTAIITGYISSG 194

Query: 224 CFIQCVNVFKKMRGKQQMLPDNFTLPFVLKACVHVLDFVLGVQVHGIVLKIGLEKDVFVK 403
            F + +  FKK+  +  + PD+F+L  VL AC  + D   G  +   +   G+ ++VFV 
Sbjct: 195 HFREAIGAFKKLL-EMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVA 253

Query: 404 TGLVSLYGKCGELRDAEKVFDDIPQRNVVSWT 499
           T L+ +Y KCG L  A  +F  +P++++VSW+
Sbjct: 254 TSLLDMYVKCGNLERANLIFSAMPEKDIVSWS 285



 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 31/120 (25%), Positives = 64/120 (53%)
 Frame = +2

Query: 143 ASLIFNQTHNPNIFLYNTLLRGLVANNCFIQCVNVFKKMRGKQQMLPDNFTLPFVLKACV 322
           A+LIF+     +I  ++T+++G   N    Q +++F +M+  + + PD +T+  VL AC 
Sbjct: 269 ANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQS-ENLKPDCYTMVGVLSACA 327

Query: 323 HVLDFVLGVQVHGIVLKIGLEKDVFVKTGLVSLYGKCGELRDAEKVFDDIPQRNVVSWTA 502
            +    LG+    ++ +     +  + T L+ +Y KCG +  A ++F  + +++ V W A
Sbjct: 328 TLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNA 387


>ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Cucumis sativus]
          Length = 688

 Score =  173 bits (438), Expect = 1e-41
 Identities = 85/158 (53%), Positives = 114/158 (72%)
 Frame = +2

Query: 29  NYLKHLHACLLRTNLHQDTYLVNILLKSTLNVFHKPLYASLIFNQTHNPNIFLYNTLLRG 208
           N LKH+HA LLR +L QD YL+N++L   L+ F    Y+ L+F+Q   PNIFL+NT++RG
Sbjct: 30  NQLKHIHARLLRLHLDQDNYLLNLILCCALD-FGSTNYSKLVFSQVKEPNIFLWNTMIRG 88

Query: 209 LVANNCFIQCVNVFKKMRGKQQMLPDNFTLPFVLKACVHVLDFVLGVQVHGIVLKIGLEK 388
           LV+ +CF   ++++  MRG    LP+NFT+PFVLKAC   LD  LG+++H +++K G + 
Sbjct: 89  LVSKDCFDDAIHLYGSMRGGG-FLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDH 147

Query: 389 DVFVKTGLVSLYGKCGELRDAEKVFDDIPQRNVVSWTA 502
           DVFVKT L+SLY KC    DA KVFDDIP +NVVSWTA
Sbjct: 148 DVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTA 185



 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 40/152 (26%), Positives = 80/152 (52%)
 Frame = +2

Query: 44  LHACLLRTNLHQDTYLVNILLKSTLNVFHKPLYASLIFNQTHNPNIFLYNTLLRGLVANN 223
           +H+ L++     D ++   LL   +   +    A  +F+   + N+  +  ++ G +++ 
Sbjct: 136 IHSLLVKAGYDHDVFVKTSLLSLYVKCDNFD-DALKVFDDIPDKNVVSWTAIITGYISSG 194

Query: 224 CFIQCVNVFKKMRGKQQMLPDNFTLPFVLKACVHVLDFVLGVQVHGIVLKIGLEKDVFVK 403
            F + +  FKK+  +  + PD+F+L  VL AC  + D   G  +   +   G+ ++VFV 
Sbjct: 195 HFREAIGAFKKLL-EMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVA 253

Query: 404 TGLVSLYGKCGELRDAEKVFDDIPQRNVVSWT 499
           T L+ +Y KCG L  A  +F  +P++++VSW+
Sbjct: 254 TSLLDMYVKCGNLERANLIFSAMPEKDIVSWS 285



 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 31/120 (25%), Positives = 64/120 (53%)
 Frame = +2

Query: 143 ASLIFNQTHNPNIFLYNTLLRGLVANNCFIQCVNVFKKMRGKQQMLPDNFTLPFVLKACV 322
           A+LIF+     +I  ++T+++G   N    Q +++F +M+  + + PD +T+  VL AC 
Sbjct: 269 ANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQS-ENLKPDCYTMVGVLSACA 327

Query: 323 HVLDFVLGVQVHGIVLKIGLEKDVFVKTGLVSLYGKCGELRDAEKVFDDIPQRNVVSWTA 502
            +    LG+    ++ +     +  + T L+ +Y KCG +  A ++F  + +++ V W A
Sbjct: 328 TLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNA 387