BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00041195
         (683 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...    74   4e-11
gb|ADK92871.1| retrotransposon protein [Hypericum perforatum]          67   4e-09
ref|XP_002457390.1| hypothetical protein SORBIDRAFT_03g006560 [S...    65   2e-08
ref|XP_002327939.1| predicted protein [Populus trichocarpa] gi|2...    63   5e-08
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...    62   8e-08

>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score = 73.6 bits (179), Expect = 4e-11
 Identities = 45/133 (33%), Positives = 68/133 (51%), Gaps = 2/133 (1%)
 Frame = -2

Query: 520  RWKPPTTNFVKFNCGVGWRKEVKSGSMGAVIWDENGCFVGALSK*IQCIGSPLVVEATAI 341
            RWKPP   F+K N    W+ + ++  +G V  D  G +    +K +   GSP   E  AI
Sbjct: 1197 RWKPPHQGFLKLNTDGAWKADWENAGIGGVFRDAVGNWELGFAKRVDA-GSPEAAELMAI 1255

Query: 340  REGLHFSWDQGFRCVEIENDSKQLVNAIRGEYRCLAE-VEVPVTDI-VHLACYMEVKFQY 167
            REGL  +WD  +  +E+E D+K +V  +          + V V DI + L  +  V+F +
Sbjct: 1256 REGLQVAWDCNYHKLEVECDAKGVVQLLAKPLEAENHPLGVIVMDICILLTRHWSVEFLH 1315

Query: 166  VKRSVNNAAHCVA 128
            +KR  N  AHC+A
Sbjct: 1316 IKREGNKVAHCLA 1328


>gb|ADK92871.1| retrotransposon protein [Hypericum perforatum]
          Length = 593

 Score = 66.6 bits (161), Expect = 4e-09
 Identities = 43/141 (30%), Positives = 72/141 (51%), Gaps = 1/141 (0%)
 Frame = -2

Query: 547 VDGSARNGERWKPPTTNFVKFNCGVGWRKEVKSGSMGAVIWDENGCFVGALSK*IQCIGS 368
           V G+ R   +W  PT  F K N   G R E + G +G V+ D+ G FV A ++    +  
Sbjct: 427 VRGAPRTS-KWNAPTAGFYKINVDAGLRAE-RGGQVGIVVRDDTGAFVMATTRSFPNLVH 484

Query: 367 PLVVEATAIREGLHFSWDQGFRCVEIENDSKQLVNAIRGEYRCLAEVEVPVTDI-VHLAC 191
           P ++E  A+  GL F+   G   VE+E+D   +V  +   Y   +++   + D  + L+ 
Sbjct: 485 PTLLEGQAVYTGLEFANALGLERVELESDCLPVVMQLSKGYTDRSDLSNIIDDCKMLLSN 544

Query: 190 YMEVKFQYVKRSVNNAAHCVA 128
           + +V+  +V+R  N AAH +A
Sbjct: 545 FQQVRIAHVRREANQAAHEMA 565


>ref|XP_002457390.1| hypothetical protein SORBIDRAFT_03g006560 [Sorghum bicolor]
           gi|241929365|gb|EES02510.1| hypothetical protein
           SORBIDRAFT_03g006560 [Sorghum bicolor]
          Length = 624

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 45/141 (31%), Positives = 67/141 (47%), Gaps = 2/141 (1%)
 Frame = -2

Query: 532 RNGERWKPPTTNFVKFNCGVGWRKEVKSGSMGAVIWDENGCFVGALSK*IQCIGSPLVVE 353
           R    W  P  + +K NC   +  E  +GS G +I D  G  V +    I    SP   E
Sbjct: 13  RQLSHWTKPPGDVLKLNCDASFIAETGTGSWGVLIRDCGGEIVMSGRGRINHALSPFHAE 72

Query: 352 ATAIREGLHFSWDQGFRCVEIENDSKQLVNAIRGEYRCLAEVEVPVTDIVHLAC--YMEV 179
             A  +GL  + D G   + +E D++++V AIR +   L+ V   + +I  LAC  ++  
Sbjct: 73  LIACLQGLQLAVDLGIGRILVETDAQEVVRAIRLDDYHLSSVGYLIDEIKSLACSNFISF 132

Query: 178 KFQYVKRSVNNAAHCVAH*DH 116
           +F YV R  N AAH +A   H
Sbjct: 133 EFAYVSRDCNRAAHELAALGH 153


>ref|XP_002327939.1| predicted protein [Populus trichocarpa] gi|222837348|gb|EEE75727.1|
           predicted protein [Populus trichocarpa]
          Length = 248

 Score = 63.2 bits (152), Expect = 5e-08
 Identities = 32/97 (32%), Positives = 50/97 (51%)
 Frame = -2

Query: 538 SARNGERWKPPTTNFVKFNCGVGWRKEVKSGSMGAVIWDENGCFVGALSK*IQCIGSPLV 359
           +   G  WK P   FVK N    ++      S+  V  DE+G ++   S  ++  GS   
Sbjct: 48  TTNTGIHWKKPPLGFVKLNTDASYKYNCSKSSVAGVCRDEHGIWLFGFSSRVKS-GSAFE 106

Query: 358 VEATAIREGLHFSWDQGFRCVEIENDSKQLVNAIRGE 248
            E  A+RE L  +WD+G + V +E+DS+ +VN IR +
Sbjct: 107 AELLAVREALKLAWDKGLKRVIVESDSESVVNRIRNQ 143


>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score = 62.4 bits (150), Expect = 8e-08
 Identities = 46/145 (31%), Positives = 70/145 (48%), Gaps = 1/145 (0%)
 Frame = -2

Query: 559  VAE*VDGSARNGERWKPPTTNFVKFNCGVGWRKEVKSGSMGAVIWDENGCFVGALSK*IQ 380
            V E V GS R   RW+ P++  +K NC      + +    G +I DE G  + A  K  Q
Sbjct: 1479 VEEVVPGSLR---RWQAPSSGQLKVNCDGAANFKDRCFGGGTIIRDEFGSLIVAGGKNFQ 1535

Query: 379  CIGSPLVVEATAIREGLHFSWDQGFRCVEIENDSKQLVNAIRGEYRCLAEVEVPVTDIVH 200
               S LV E  AI+ GL    ++  R + +E+D  + ++ +  + RCLA     V DI +
Sbjct: 1536 HPVSSLVAELLAIKVGLDLVVERRLRNIMVESDCLEAIHLLNSKERCLAPEGGLVEDIQN 1595

Query: 199  LACYMEVKFQY-VKRSVNNAAHCVA 128
                + +   Y V+R  N AAH +A
Sbjct: 1596 TMALVNISSIYHVRREGNTAAHAIA 1620