BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00041174
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520265.1| pentatricopeptide repeat-containing protein,...   168   4e-40
ref|XP_002302206.1| predicted protein [Populus trichocarpa] gi|2...   164   9e-39
emb|CBI19925.3| unnamed protein product [Vitis vinifera]              147   7e-34
ref|XP_002279169.1| PREDICTED: putative pentatricopeptide repeat...   147   7e-34
emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]   147   7e-34

>ref|XP_002520265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540484|gb|EEF42051.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 681

 Score =  168 bits (426), Expect = 4e-40
 Identities = 84/145 (57%), Positives = 106/145 (73%), Gaps = 1/145 (0%)
 Frame = +1

Query: 1   LNSCVSIANRLLQMYACCG-EFSDPRKLFDEMPERNCFTWNTLIEQYMKRGEVNESLELF 177
           +N+ VS+ANRLLQMYA CG   +D   LFDEMPERNCF+WNT+IE YM+ G+   SL+LF
Sbjct: 37  INATVSLANRLLQMYARCGGTMTDAHNLFDEMPERNCFSWNTMIEGYMRVGDKERSLKLF 96

Query: 178 YSMPDKNDYSWNVVVCGLVSGGELDVARGLFDEMPRKSVKAWNSLINGYAKKGYLRMALR 357
             MP KNDYSWNVV+ G    GELDVA+ LF+EMPR++  AWNS+I+GYA+ G+ R A+ 
Sbjct: 97  DLMPQKNDYSWNVVISGFAKAGELDVAKKLFNEMPRRNGVAWNSMIHGYARNGFAREAVG 156

Query: 358 FFTEFLGYDRCGASCLDAFLLATVI 432
            F E L  +    SC D F+LA+VI
Sbjct: 157 LFKE-LNSNPLEKSCGDTFVLASVI 180


>ref|XP_002302206.1| predicted protein [Populus trichocarpa] gi|222843932|gb|EEE81479.1|
           predicted protein [Populus trichocarpa]
          Length = 681

 Score =  164 bits (414), Expect = 9e-39
 Identities = 79/144 (54%), Positives = 98/144 (68%)
 Frame = +1

Query: 1   LNSCVSIANRLLQMYACCGEFSDPRKLFDEMPERNCFTWNTLIEQYMKRGEVNESLELFY 180
           + S +S+ANRLLQMY  CG  +D  KLFDEMP RNCF+WNT+IE YMK G    S+ LF 
Sbjct: 37  IQSTLSLANRLLQMYTRCGSMTDAHKLFDEMPHRNCFSWNTMIEGYMKSGNKERSIRLFD 96

Query: 181 SMPDKNDYSWNVVVCGLVSGGELDVARGLFDEMPRKSVKAWNSLINGYAKKGYLRMALRF 360
            M +KNDYSWNVV  G    GE+++AR LF+EMP ++   WNS+I+ YA+ G  R A+R 
Sbjct: 97  MMSNKNDYSWNVVFSGFAKAGEMEIARRLFNEMPNRNGVVWNSMIHSYARNGSPREAVRL 156

Query: 361 FTEFLGYDRCGASCLDAFLLATVI 432
           F E L  D    SC D F+LATVI
Sbjct: 157 FKE-LNLDPLDKSCCDTFVLATVI 179



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 23/75 (30%), Positives = 42/75 (56%)
 Frame = +1

Query: 19  IANRLLQMYACCGEFSDPRKLFDEMPERNCFTWNTLIEQYMKRGEVNESLELFYSMPDKN 198
           +A+  +  Y+ CG  +D  KLF E+   +    N++I  Y   G++ ++ ++F +MP K+
Sbjct: 341 VASAFIDAYSKCGSLNDACKLFSELKTYDTILLNSMITVYSNSGKIEDAKQIFNTMPSKS 400

Query: 199 DYSWNVVVCGLVSGG 243
             SWN ++ GL   G
Sbjct: 401 LISWNSMIVGLSQNG 415


>emb|CBI19925.3| unnamed protein product [Vitis vinifera]
          Length = 581

 Score =  147 bits (372), Expect = 7e-34
 Identities = 74/144 (51%), Positives = 100/144 (69%)
 Frame = +1

Query: 1   LNSCVSIANRLLQMYACCGEFSDPRKLFDEMPERNCFTWNTLIEQYMKRGEVNESLELFY 180
           L+S +SI NRLLQMY+ C    + ++LF+EMP+RNCF+WNT+IE Y+K G   +SLELF 
Sbjct: 74  LHSVLSIGNRLLQMYSRCNSMREAQQLFEEMPKRNCFSWNTMIEGYLKSGSKGKSLELFD 133

Query: 181 SMPDKNDYSWNVVVCGLVSGGELDVARGLFDEMPRKSVKAWNSLINGYAKKGYLRMALRF 360
           SMP K+ +SWNVV+ G    G L+VAR LF+EMP K+  AWNS+I+GYA  G  + A+  
Sbjct: 134 SMPHKDAFSWNVVISGFAKEGNLEVARRLFNEMPWKNGIAWNSMIHGYACNGRPKEAVGL 193

Query: 361 FTEFLGYDRCGASCLDAFLLATVI 432
           F + L  +     C D F+LATV+
Sbjct: 194 FKD-LSLNPLERFCGDTFVLATVV 216


>ref|XP_002279169.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g77010, mitochondrial-like [Vitis vinifera]
          Length = 685

 Score =  147 bits (372), Expect = 7e-34
 Identities = 74/144 (51%), Positives = 100/144 (69%)
 Frame = +1

Query: 1   LNSCVSIANRLLQMYACCGEFSDPRKLFDEMPERNCFTWNTLIEQYMKRGEVNESLELFY 180
           L+S +SI NRLLQMY+ C    + ++LF+EMP+RNCF+WNT+IE Y+K G   +SLELF 
Sbjct: 38  LHSVLSIGNRLLQMYSRCNSMREAQQLFEEMPKRNCFSWNTMIEGYLKSGSKGKSLELFD 97

Query: 181 SMPDKNDYSWNVVVCGLVSGGELDVARGLFDEMPRKSVKAWNSLINGYAKKGYLRMALRF 360
           SMP K+ +SWNVV+ G    G L+VAR LF+EMP K+  AWNS+I+GYA  G  + A+  
Sbjct: 98  SMPHKDAFSWNVVISGFAKEGNLEVARRLFNEMPWKNGIAWNSMIHGYACNGRPKEAVGL 157

Query: 361 FTEFLGYDRCGASCLDAFLLATVI 432
           F + L  +     C D F+LATV+
Sbjct: 158 FKD-LSLNPLERFCGDTFVLATVV 180


>emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]
          Length = 1796

 Score =  147 bits (372), Expect = 7e-34
 Identities = 74/144 (51%), Positives = 100/144 (69%)
 Frame = +1

Query: 1   LNSCVSIANRLLQMYACCGEFSDPRKLFDEMPERNCFTWNTLIEQYMKRGEVNESLELFY 180
           L+S +SI NRLLQMY+ C    + ++LF+EMP+RNCF+WNT+IE Y+K G   +SLELF 
Sbjct: 38  LHSVLSIGNRLLQMYSRCNSMREAQQLFEEMPKRNCFSWNTMIEGYLKSGSKGKSLELFD 97

Query: 181 SMPDKNDYSWNVVVCGLVSGGELDVARGLFDEMPRKSVKAWNSLINGYAKKGYLRMALRF 360
           SMP K+ +SWNVV+ G    G L+VAR LF+EMP K+  AWNS+I+GYA  G  + A+  
Sbjct: 98  SMPHKDAFSWNVVISGFAKEGNLEVARRLFNEMPWKNGIAWNSMIHGYACNGRPKEAVGL 157

Query: 361 FTEFLGYDRCGASCLDAFLLATVI 432
           F + L  +     C D F+LATV+
Sbjct: 158 FKD-LSLNPLERFCGDTFVLATVV 180



 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 37/87 (42%), Positives = 54/87 (62%)
 Frame = +1

Query: 109  FTWNTLIEQYMKRGEVNESLELFYSMPDKNDYSWNVVVCGLVSGGELDVARGLFDEMPRK 288
            F  N  ++ Y + G  N+SL +F  + DKN  SWN+ +   V  GEL+ AR +FDEMP++
Sbjct: 746  FLGNRCLDLYSQLGTGNDSLRVFEDIIDKNLISWNIFLKAFVRFGELERARDVFDEMPKR 805

Query: 289  SVKAWNSLINGYAKKGYLRMALRFFTE 369
             V +WN++I+GY   G    A RFF+E
Sbjct: 806  DVVSWNTMISGYVSFGLFDDAFRFFSE 832



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 28/98 (28%), Positives = 57/98 (58%)
 Frame = +1

Query: 4    NSCVSIANRLLQMYACCGEFSDPRKLFDEMPERNCFTWNTLIEQYMKRGEVNESLELFYS 183
            N+   + NR L +Y+  G  +D  ++F+++ ++N  +WN  ++ +++ GE+  + ++F  
Sbjct: 742  NTHTFLGNRCLDLYSQLGTGNDSLRVFEDIIDKNLISWNIFLKAFVRFGELERARDVFDE 801

Query: 184  MPDKNDYSWNVVVCGLVSGGELDVARGLFDEMPRKSVK 297
            MP ++  SWN ++ G VS G  D A   F EM +  ++
Sbjct: 802  MPKRDVVSWNTMISGYVSFGLFDDAFRFFSEMQKAGIR 839