BLASTX nr result

ID: Lithospermum22_contig00041146 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00041146
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_085585.1| hypothetical protein ArthMp026 [Arabidopsis tha...    89   4e-16
ref|YP_005090395.1| orf142 (mitochondrion) [Phoenix dactylifera]...    69   4e-10
ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncat...    67   1e-09
ref|XP_004153848.1| PREDICTED: LOW QUALITY PROTEIN: NADH-ubiquin...    61   1e-09
gb|AAD34889.1| unknown [Oryza sativa]                                  67   2e-09

>ref|NP_085585.1| hypothetical protein ArthMp026 [Arabidopsis thaliana]
           gi|45477077|sp|P92563.1|M1330_ARATH RecName:
           Full=Uncharacterized mitochondrial protein AtMg01330;
           AltName: Full=ORF107h gi|1785786|emb|CAA69783.1| unnamed
           protein product [Arabidopsis thaliana]
          Length = 127

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 51/81 (62%), Positives = 54/81 (66%), Gaps = 3/81 (3%)
 Frame = -3

Query: 234 MKGQKV*IGGYNFSISLGAENESTSRCDTAFSILVGKXXXXXXXXXXXXXXXSKAR---E 64
           MKG KV IGGY F ISLGAENESTSRCDTAFS LVGK                +A+   E
Sbjct: 20  MKGPKVEIGGYKFPISLGAENESTSRCDTAFSFLVGKERRSPSEPNRPMKNKRRAKPNGE 79

Query: 63  AHAERARGKRSVEEKQSSSFP 1
           AHAE+AR K SVEEKQ SSFP
Sbjct: 80  AHAEQARRKISVEEKQPSSFP 100


>ref|YP_005090395.1| orf142 (mitochondrion) [Phoenix dactylifera]
           gi|343478447|gb|AEM43935.1| orf142 (mitochondrion)
           [Phoenix dactylifera]
          Length = 141

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 32/37 (86%), Positives = 32/37 (86%)
 Frame = +3

Query: 84  LILHWTVRMDFAVLSQLK*KRLYHIEMSIRFPPPMRW 194
           L LHWTVRMDFAVLSQ K K LYHIEMSIRFPP MRW
Sbjct: 93  LFLHWTVRMDFAVLSQRKWKGLYHIEMSIRFPPQMRW 129


>ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncatula]
           gi|355477400|gb|AES58603.1| NADH dehydrogenase subunit
           [Medicago truncatula]
          Length = 1094

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 36/62 (58%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
 Frame = -1

Query: 206 VTISPSHWGRKTNRHLDVIQPFLF*LGKNGEVH---XXXXXXXXXXXXXXXXXRNGHGEK 36
           V  SPSHWGRKTNRHLDVIQPFLF LGKNGEVH                    R GHGEK
Sbjct: 791 VNNSPSHWGRKTNRHLDVIQPFLFLLGKNGEVHPNRPMKNKRRAKRQWRAKRMRKGHGEK 850

Query: 35  EV 30
           ++
Sbjct: 851 KI 852


>ref|XP_004153848.1| PREDICTED: LOW QUALITY PROTEIN: NADH-ubiquinone oxidoreductase
           chain 2-like, partial [Cucumis sativus]
          Length = 472

 Score = 61.2 bits (147), Expect(2) = 1e-09
 Identities = 28/33 (84%), Positives = 28/33 (84%)
 Frame = -1

Query: 206 VTISPSHWGRKTNRHLDVIQPFLF*LGKNGEVH 108
           VT SPSHWGRKTNRHLDV QP  F LGKNGEVH
Sbjct: 371 VTNSPSHWGRKTNRHLDVRQPLKFELGKNGEVH 403



 Score = 25.8 bits (55), Expect(2) = 1e-09
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -3

Query: 75  KAREAHAERARGKRSVEEKQSSSFP 1
           +A+    ER R K SVE+K  SSFP
Sbjct: 419 RAKRMXRERTRIKISVEKKLPSSFP 443


>gb|AAD34889.1| unknown [Oryza sativa]
          Length = 166

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 31/37 (83%), Positives = 31/37 (83%)
 Frame = +3

Query: 84  LILHWTVRMDFAVLSQLK*KRLYHIEMSIRFPPPMRW 194
           L LHW VRMDFAVLSQ K K LYHIEMSIRFPP MRW
Sbjct: 93  LFLHWRVRMDFAVLSQRKWKGLYHIEMSIRFPPQMRW 129


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