BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00041107
         (660 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278504.2| PREDICTED: pentatricopeptide repeat-containi...   248   8e-67
emb|CBI19955.3| unnamed protein product [Vitis vinifera]              241   5e-65
gb|AER41645.1| CRR4 [Oryza punctata]                                  213   3e-55
gb|AER41563.1| CRR4 [Oryza australiensis]                             210   1e-54
ref|NP_001059322.1| Os07g0260000 [Oryza sativa Japonica Group] g...   209   4e-54

>ref|XP_002278504.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 658

 Score =  248 bits (632), Expect(2) = 8e-67
 Identities = 118/207 (57%), Positives = 158/207 (76%), Gaps = 3/207 (1%)
 Frame = -2

Query: 656 DAIFSYNRMREAQIMPNSFTFTSLFRCLEF---LDDGKCVHGQVMKLGFLSSVFVHNTIL 486
           +A+  Y+RM+   +  NSFTFT L +C E    L+DG+ +HG+++KLGF SSVFV N++L
Sbjct: 57  EALRVYSRMKALMVEANSFTFTFLLKCFETSQALEDGRVIHGEILKLGFGSSVFVQNSLL 116

Query: 485 DFYSKCGGNLGYVWMVFDEMVERDVISYNTMIGACMNHGEVEFAIRLFEGMPERNTVTWN 306
            FY+ C  NLG  + VF+EM ERDVIS+N+MI A M  GE++ AI L + MPERN VTWN
Sbjct: 117 GFYANCSENLGSAYRVFEEMPERDVISWNSMISAYMTRGEIQSAIGLLDKMPERNIVTWN 176

Query: 305 SVIGGLSKTGNVELARTVFNKMPQKNTVSWNSMVSGYIMVGDMRTAQALFDEVPEKSVVS 126
           SV+ GLSK GN+ELA +VF +MP +N VSWNSM+SGY+ +GD+R AQ++F ++PEK+VVS
Sbjct: 177 SVVCGLSKAGNMELAHSVFEQMPLRNEVSWNSMISGYVRIGDVRAAQSIFYQMPEKTVVS 236

Query: 125 WTAMVTGYATVGDLESARRIFDQMQGK 45
           WTAM++GYAT GDL+SA  IF+ M  K
Sbjct: 237 WTAMISGYATNGDLKSAENIFNHMPVK 263



 Score = 32.3 bits (72), Expect(2) = 8e-67
 Identities = 13/15 (86%), Positives = 15/15 (100%)
 Frame = -3

Query: 46  KNVVSWNAMIAGYVN 2
           KNVVSWNAMI+GYV+
Sbjct: 263 KNVVSWNAMISGYVH 277


>emb|CBI19955.3| unnamed protein product [Vitis vinifera]
          Length = 488

 Score =  241 bits (616), Expect(2) = 5e-65
 Identities = 115/199 (57%), Positives = 152/199 (76%), Gaps = 3/199 (1%)
 Frame = -2

Query: 632 MREAQIMPNSFTFTSLFRCLEF---LDDGKCVHGQVMKLGFLSSVFVHNTILDFYSKCGG 462
           M+   +  NSFTFT L +C E    L+DG+ +HG+++KLGF SSVFV N++L FY+ C  
Sbjct: 1   MKALMVEANSFTFTFLLKCFETSQALEDGRVIHGEILKLGFGSSVFVQNSLLGFYANCSE 60

Query: 461 NLGYVWMVFDEMVERDVISYNTMIGACMNHGEVEFAIRLFEGMPERNTVTWNSVIGGLSK 282
           NLG  + VF+EM ERDVIS+N+MI A M  GE++ AI L + MPERN VTWNSV+ GLSK
Sbjct: 61  NLGSAYRVFEEMPERDVISWNSMISAYMTRGEIQSAIGLLDKMPERNIVTWNSVVCGLSK 120

Query: 281 TGNVELARTVFNKMPQKNTVSWNSMVSGYIMVGDMRTAQALFDEVPEKSVVSWTAMVTGY 102
            GN+ELA +VF +MP +N VSWNSM+SGY+ +GD+R AQ++F ++PEK+VVSWTAM++GY
Sbjct: 121 AGNMELAHSVFEQMPLRNEVSWNSMISGYVRIGDVRAAQSIFYQMPEKTVVSWTAMISGY 180

Query: 101 ATVGDLESARRIFDQMQGK 45
           AT GDL+SA  IF+ M  K
Sbjct: 181 ATNGDLKSAENIFNHMPVK 199



 Score = 32.3 bits (72), Expect(2) = 5e-65
 Identities = 13/15 (86%), Positives = 15/15 (100%)
 Frame = -3

Query: 46  KNVVSWNAMIAGYVN 2
           KNVVSWNAMI+GYV+
Sbjct: 199 KNVVSWNAMISGYVH 213


>gb|AER41645.1| CRR4 [Oryza punctata]
          Length = 632

 Score =  213 bits (541), Expect(2) = 3e-55
 Identities = 101/211 (47%), Positives = 145/211 (68%), Gaps = 7/211 (3%)
 Frame = -2

Query: 656 DAIFSYNRMREAQIMPNSFTFTSLFRCLEFLDDGK---CVHGQVMKLGFLSSVFVHNTIL 486
           DA+ +Y  MR   + PN FTFT L R    L   +   CVHGQ+++ GF S VFV N ++
Sbjct: 93  DALAAYVAMRAQGVPPNGFTFTFLLRACALLGLPRPCGCVHGQIVRCGFGSDVFVQNALM 152

Query: 485 DFYSKCGGN----LGYVWMVFDEMVERDVISYNTMIGACMNHGEVEFAIRLFEGMPERNT 318
           D Y +CGG     +G    VFDEMV++DV+S+N+++G  M+ G+   A+ LFE MPERN 
Sbjct: 153 DVYYRCGGGGAGGVGAARQVFDEMVDKDVVSWNSIVGVYMSSGDATGAMGLFEAMPERNV 212

Query: 317 VTWNSVIGGLSKTGNVELARTVFNKMPQKNTVSWNSMVSGYIMVGDMRTAQALFDEVPEK 138
           V+WN+V+ G ++TG++  ARTVF++MP +N VSWN M+SGY   GD+  A+++FD + +K
Sbjct: 213 VSWNTVVAGFARTGDMVTARTVFDRMPSRNAVSWNLMISGYATSGDVEAARSVFDRMDQK 272

Query: 137 SVVSWTAMVTGYATVGDLESARRIFDQMQGK 45
            VVSWTAMV+ YA +GDL++A+ +FD M  K
Sbjct: 273 DVVSWTAMVSAYAKIGDLDTAKELFDHMPVK 303



 Score = 28.9 bits (63), Expect(2) = 3e-55
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = -3

Query: 46  KNVVSWNAMIAGY 8
           KN+VSWNAMI GY
Sbjct: 303 KNLVSWNAMITGY 315



 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 40/169 (23%)
 Frame = -2

Query: 440 VFDEMVERDVISYNTMIGACMNHGEVEFAIRLFEGMPERNTVTWNSVIGGLSKTGNVELA 261
           VFD M ++DV+S+  M+ A    G+++ A  LF+ MP +N V+WN++I G +     + A
Sbjct: 265 VFDRMDQKDVVSWTAMVSAYAKIGDLDTAKELFDHMPVKNLVSWNAMITGYNHNSRYDEA 324

Query: 260 RTVFNKM-------PQKNTV----------------SW-----------------NSMVS 201
              F  M       P + T+                +W                 N+++ 
Sbjct: 325 LRTFQLMMLEGRFRPDEATLVSVVSACAQLGSVEYCNWISSFIGKSNTHLTVALGNALID 384

Query: 200 GYIMVGDMRTAQALFDEVPEKSVVSWTAMVTGYATVGDLESARRIFDQM 54
            +   GD+  AQ++F ++  + +++WT M++G+A  G    A  +++ M
Sbjct: 385 MFAKCGDVGRAQSIFYKMETRCIITWTTMISGFAFNGLCREALLVYNNM 433


>gb|AER41563.1| CRR4 [Oryza australiensis]
          Length = 599

 Score =  210 bits (535), Expect(2) = 1e-54
 Identities = 99/209 (47%), Positives = 143/209 (68%), Gaps = 5/209 (2%)
 Frame = -2

Query: 656 DAIFSYNRMREAQIMPNSFTFTSLFRCLEFLDDGK---CVHGQVMKLGFLSSVFVHNTIL 486
           DA+ +Y  MR   + PN FTFT L R    L   +   CVHGQ+++ GF   VFV N ++
Sbjct: 92  DALAAYAAMRARGVPPNGFTFTFLLRACALLGLPRPCGCVHGQIVRCGFGGDVFVQNALM 151

Query: 485 DFYSKCGG--NLGYVWMVFDEMVERDVISYNTMIGACMNHGEVEFAIRLFEGMPERNTVT 312
           D Y +CGG   +G    VFD+MVE+DV+S+N+++G  M+ G+   A+ LFE MPERN V+
Sbjct: 152 DVYYRCGGAGGVGAARQVFDQMVEKDVVSWNSIVGVYMSSGDATGAMGLFEAMPERNVVS 211

Query: 311 WNSVIGGLSKTGNVELARTVFNKMPQKNTVSWNSMVSGYIMVGDMRTAQALFDEVPEKSV 132
           WN+V+ G ++ G++  ARTVF++MP +N VSWN M+SGY   GD+  A ++FD + +K V
Sbjct: 212 WNTVVAGFARAGDMVTARTVFDRMPSRNAVSWNLMISGYATSGDVEAAHSVFDRMDQKDV 271

Query: 131 VSWTAMVTGYATVGDLESARRIFDQMQGK 45
           VSWTAMV+ YA +GDL++A+++FD M  K
Sbjct: 272 VSWTAMVSAYAKIGDLDNAKQLFDHMPVK 300



 Score = 28.9 bits (63), Expect(2) = 1e-54
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = -3

Query: 46  KNVVSWNAMIAGY 8
           KN+VSWNAMI GY
Sbjct: 300 KNLVSWNAMITGY 312



 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 43/177 (24%), Positives = 81/177 (45%), Gaps = 40/177 (22%)
 Frame = -2

Query: 464 GNLGYVWMVFDEMVERDVISYNTMIGACMNHGEVEFAIRLFEGMPERNTVTWNSVIGGLS 285
           G++     VFD M ++DV+S+  M+ A    G+++ A +LF+ MP +N V+WN++I G +
Sbjct: 254 GDVEAAHSVFDRMDQKDVVSWTAMVSAYAKIGDLDNAKQLFDHMPVKNLVSWNAMITGYN 313

Query: 284 KTGNVELARTVFNKM-------PQKNTV----------------SW-------------- 216
                + A   F  M       P + T+                +W              
Sbjct: 314 HNSRYDEALRTFQLMMLEGRFRPDEATLVSVVSACAQLGSVEYCNWIGSFIGKSKIHLTV 373

Query: 215 ---NSMVSGYIMVGDMRTAQALFDEVPEKSVVSWTAMVTGYATVGDLESARRIFDQM 54
              N+++  +   GD+  AQ+ F E+  + +++WT M++G+A  G    A  +++ M
Sbjct: 374 ALGNALIDMFAKCGDVGRAQSFFYEMKTRCIITWTTMISGFAFNGFCREALLVYNNM 430


>ref|NP_001059322.1| Os07g0260000 [Oryza sativa Japonica Group]
           gi|113610858|dbj|BAF21236.1| Os07g0260000 [Oryza sativa
           Japonica Group]
          Length = 750

 Score =  209 bits (531), Expect(2) = 4e-54
 Identities = 99/211 (46%), Positives = 141/211 (66%), Gaps = 7/211 (3%)
 Frame = -2

Query: 656 DAIFSYNRMREAQIMPNSFTFTSLFRCLEFLDDGK---CVHGQVMKLGFLSSVFVHNTIL 486
           DA+ +Y  MR   + PN FTFT L R    L   +   CVHGQ+++ GF S VFV N ++
Sbjct: 94  DALAAYAAMRAQGVPPNGFTFTFLLRACALLGLPRPCGCVHGQIVRCGFGSDVFVQNALM 153

Query: 485 DFYSKCGGN----LGYVWMVFDEMVERDVISYNTMIGACMNHGEVEFAIRLFEGMPERNT 318
           D Y +CGG     +G    VFDEMV+RDV+S+N+++G  M+ G+   A+  FE MPERN 
Sbjct: 154 DVYHRCGGGGGGGVGAARQVFDEMVDRDVVSWNSIVGVYMSSGDATGAMGFFEAMPERNV 213

Query: 317 VTWNSVIGGLSKTGNVELARTVFNKMPQKNTVSWNSMVSGYIMVGDMRTAQALFDEVPEK 138
           V+WN+V+ G ++ G++  AR VF++MP +N VSWN M+SGY M GD+  A+++FD + +K
Sbjct: 214 VSWNTVVAGFARMGDMVTARAVFDRMPSRNAVSWNLMISGYAMSGDVEAARSVFDRMDQK 273

Query: 137 SVVSWTAMVTGYATVGDLESARRIFDQMQGK 45
            VVSWTAMV+ YA +GDL++   +FD M  K
Sbjct: 274 DVVSWTAMVSAYAKIGDLDTVNELFDHMPVK 304



 Score = 28.9 bits (63), Expect(2) = 4e-54
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = -3

Query: 46  KNVVSWNAMIAGY 8
           KN+VSWNAMI GY
Sbjct: 304 KNLVSWNAMITGY 316