BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00041098
         (592 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL79762.1|AC096687_26 putative polyprotein [Oryza sativa Jap...   119   3e-25
gb|AAK82434.1|AC091247_1 putative polyprotein, 5'-partial [Oryza...   119   3e-25
gb|ADX31265.1| unknown [Triticum aestivum]                            118   9e-25
gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays]      117   1e-24
gb|ADB85398.1| putative retrotransposon protein [Phyllostachys e...   115   7e-24

>gb|AAL79762.1|AC096687_26 putative polyprotein [Oryza sativa Japonica Group]
            gi|108711868|gb|ABF99663.1| retrotransposon protein,
            putative, unclassified [Oryza sativa Japonica Group]
          Length = 1087

 Score =  119 bits (299), Expect = 3e-25
 Identities = 54/131 (41%), Positives = 84/131 (64%), Gaps = 1/131 (0%)
 Frame = +3

Query: 195  QAISVVQPTWMADISGTYLKDRHLQHILAGIIVKPNQFSAYEYKEGILRYKDRVVLGDDA 374
            QAISVVQP W+ ++  +Y+ D   Q +L  + +       +   +G+++   RV +G ++
Sbjct: 911  QAISVVQPVWIQEVLNSYVVDSQAQLLLIELAISSPNGQGFTLSQGLIKKNGRVWIGANS 970

Query: 375  EQKSKILTALHDSAI-GHSGMSVTYNKLKSIFYW*GMK*DVTDFIASCDVCQRNKHELVA 551
              ++KI++A  DSA+ GHSG+  TY ++K +F W G+K  VTDF+  CD+CQR KHE  A
Sbjct: 971  AIQTKIISAFRDSAVRGHSGVQATYQRVKKLFVWVGLKKSVTDFVQQCDICQRAKHENCA 1030

Query: 552  YPGLLNPVQVP 584
            YPGLL P+ +P
Sbjct: 1031 YPGLLQPLPIP 1041


>gb|AAK82434.1|AC091247_1 putative polyprotein, 5'-partial [Oryza sativa Japonica Group]
          Length = 799

 Score =  119 bits (299), Expect = 3e-25
 Identities = 54/131 (41%), Positives = 84/131 (64%), Gaps = 1/131 (0%)
 Frame = +3

Query: 195  QAISVVQPTWMADISGTYLKDRHLQHILAGIIVKPNQFSAYEYKEGILRYKDRVVLGDDA 374
            QAISVVQP W+ ++  +Y+ D   Q +L  + +       +   +G+++   RV +G ++
Sbjct: 623  QAISVVQPVWIQEVLNSYVVDSQAQLLLIELAISSPNGQGFTLSQGLIKKNGRVWIGANS 682

Query: 375  EQKSKILTALHDSAI-GHSGMSVTYNKLKSIFYW*GMK*DVTDFIASCDVCQRNKHELVA 551
              ++KI++A  DSA+ GHSG+  TY ++K +F W G+K  VTDF+  CD+CQR KHE  A
Sbjct: 683  AIQTKIISAFRDSAVRGHSGVQATYQRVKKLFVWVGLKKSVTDFVQQCDICQRAKHENCA 742

Query: 552  YPGLLNPVQVP 584
            YPGLL P+ +P
Sbjct: 743  YPGLLQPLPIP 753


>gb|ADX31265.1| unknown [Triticum aestivum]
          Length = 1231

 Score =  118 bits (295), Expect = 9e-25
 Identities = 52/133 (39%), Positives = 86/133 (64%), Gaps = 1/133 (0%)
 Frame = +3

Query: 192  IQAISVVQPTWMADISGTYLKDRHLQHILAGIIVKPNQFSAYEYKEGILRYKDRVVLGDD 371
            + AIS+ +P W+  ++ +Y +D+ +Q  +A I + P   S Y  K+G++RYK R+ +G D
Sbjct: 1079 VAAISICKPAWLEAVAVSYREDKEIQDKMAQIALDPGSDSDYSLKDGVMRYKGRIWIGSD 1138

Query: 372  AEQKSKILTALHDSAI-GHSGMSVTYNKLKSIFYW*GMK*DVTDFIASCDVCQRNKHELV 548
            +  +  ++ ALHDSA+ GHSG   TY+++K++F+W GMK  +  ++  C  CQR K E +
Sbjct: 1139 SMIQQSLVKALHDSAVGGHSGFYATYHRIKNLFFWKGMKAQIKQYVKECVTCQRAKTERI 1198

Query: 549  AYPGLLNPVQVPK 587
            A  GLL P+ +PK
Sbjct: 1199 APAGLLQPLPIPK 1211


>gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays]
          Length = 2396

 Score =  117 bits (293), Expect = 1e-24
 Identities = 55/133 (41%), Positives = 87/133 (65%), Gaps = 1/133 (0%)
 Frame = +3

Query: 189  HIQAISVVQPTWMADISGTYLKDRHLQHILAGIIVKPNQFSAYEYKEGILRYKDRVVLGD 368
            H  AIS   PTW+ ++   Y KD   + +LA +I+     + +   +GI+R+K+R+ LG 
Sbjct: 1058 HCCAISHSVPTWLQEVVEGYDKDPTSKQLLAQLILNSADKAPFSLHQGIIRHKNRIWLGG 1117

Query: 369  DAEQKSKILTALHDSAIG-HSGMSVTYNKLKSIFYW*GMK*DVTDFIASCDVCQRNKHEL 545
            + + + K+L A+HD+A+G HSG   TY+K+K +FYW GM+ DV  ++ SC VCQ++K + 
Sbjct: 1118 NLQLQQKVLQAMHDTAVGGHSGAPATYHKVKQMFYWPGMRADVLQYVQSCTVCQQSKPDR 1177

Query: 546  VAYPGLLNPVQVP 584
              YPGLL P++VP
Sbjct: 1178 AKYPGLLQPLEVP 1190


>gb|ADB85398.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1348

 Score =  115 bits (287), Expect = 7e-24
 Identities = 52/132 (39%), Positives = 81/132 (61%), Gaps = 1/132 (0%)
 Frame = +3

Query: 192  IQAISVVQPTWMADISGTYLKDRHLQHILAGIIVKPNQFSAYEYKEGILRYKDRVVLGDD 371
            + AIS+  P+W+  ++ +Y  D + + ++  + + PN  S Y    G+LRYK R+ +G D
Sbjct: 853  VMAISIAVPSWIEAVTNSYQNDANCKELMEQLTLAPNADSGYTLNAGVLRYKGRIYVGKD 912

Query: 372  AEQKSKILTALHDSAIG-HSGMSVTYNKLKSIFYW*GMK*DVTDFIASCDVCQRNKHELV 548
             E +  I+ +LH SA+G HSG   TY ++K +FYW GMK ++   +  C VCQR+K E  
Sbjct: 913  PELRLNIIHSLHMSAVGGHSGRVATYQRVKHLFYWPGMKKEIHTMVRECAVCQRSKAEHC 972

Query: 549  AYPGLLNPVQVP 584
             YPGLL P+ +P
Sbjct: 973  HYPGLLEPLPIP 984