BLASTX nr result

ID: Lithospermum22_contig00041062 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00041062
         (677 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]        97   2e-18
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...    96   8e-18
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    94   3e-17
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...    91   2e-16
emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|72678...    91   3e-16

>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 69/227 (30%), Positives = 101/227 (44%), Gaps = 10/227 (4%)
 Frame = -1

Query: 656  KEEGGLGIKRLQVWNKACMSFHIWNLCSHKETL*VKLIHSFRLKGQCFWAAKSKNTDSXX 477
            K EGGLG++RL  WNK      IW L   K++L     H   L    FWA +   +DS  
Sbjct: 862  KSEGGLGLRRLLEWNKTLSMRLIWRLFVAKDSLWADWQHLHHLSRGSFWAVEGGQSDSWT 921

Query: 476  XXXXXXXXXXXXEYVSIQVGNGRICNFLYENCHHLGPLHRVLIEREISLMRVQECDSIAD 297
                        +++  +VGNG   ++ Y+N   LGPL R++ +   S +RV     +A 
Sbjct: 922  WKRLLSLRPLAHQFLVCKVGNGLKADYWYDNWTSLGPLFRIIGDIGPSSLRVPLLAKVAS 981

Query: 296  VV---GRNH*VNDRKLSPNIDEV*KSLP---SLSEREDRTIWINN----QQFSCAKVW*K 147
                 G    V+    +  I +   ++P   +  E  DR  W  N    Q FS AK W  
Sbjct: 982  AFSEDGWRLPVSRSAPAKGIHDHLCTVPVPSTAQEDVDRYEWSVNGFLCQGFSAAKTWEA 1041

Query: 146  LR*EEARVSWFKVVWIKDNIPSHCMTTWMLCVGRLPTRDRLKAWGVI 6
            +R +    SW   +W K  +P +    W+  + RL TR RL +WG I
Sbjct: 1042 IRPKATVKSWASSIWFKGAVPKYAFNMWVSHLNRLLTRQRLASWGHI 1088


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score = 95.5 bits (236), Expect = 8e-18
 Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 8/224 (3%)
 Frame = -1

Query: 662  KNKEEGGLGIKRLQVWNKACMSFHIWNLCSHKETL*VKLIHSFRLKGQCFWAAKSKNTDS 483
            K K+EGGLG++ L+  N  C    +W + SH  +L VK +    L+   FW  K   +  
Sbjct: 867  KPKDEGGLGLRSLKEANDVCCLKLVWKIVSHSNSLWVKWVDQHLLRNASFWEVKQTVSQG 926

Query: 482  XXXXXXXXXXXXXXEYVS-IQVGNGRICNFLYENCHHLGPLHRVLIEREISLMRVQECDS 306
                          + +S ++VGNG+  +F Y+N   LG L     +R +  + +    +
Sbjct: 927  SWIWKKLLKYREVAKTLSKVEVGNGKQTSFWYDNWSDLGQLLERTGDRGLIDLGISRRMT 986

Query: 305  IADVVGRNH*VNDRKLSPNI--DEV*KSLPSLSEREDRTIW-----INNQQFSCAKVW*K 147
            + +          R    N+  D + KS  + +E ED+ +W     +    FS    W  
Sbjct: 987  VEEAWTNRRQRRHRNDVYNVIEDALKKSWDTRTETEDKVLWRGKSDVFRTTFSTRDTWHH 1046

Query: 146  LR*EEARVSWFKVVWIKDNIPSHCMTTWMLCVGRLPTRDRLKAW 15
             R   ARV W KV+W     P +   +W+   GRLPT DR+  W
Sbjct: 1047 TRSTSARVPWHKVIWFSHATPKYSFCSWLAAHGRLPTGDRMINW 1090


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 93.6 bits (231), Expect = 3e-17
 Identities = 59/223 (26%), Positives = 102/223 (45%), Gaps = 7/223 (3%)
 Frame = -1

Query: 656 KEEGGLGIKRLQVWNKACMSFHIWNLCSHKE-TL*VKLIHSFRLKGQCFWAAKSKNTDSX 480
           K+EGGLGIK ++ WNK  +  HIWNLC+  + ++    I S  L+G+ FW  K+    S 
Sbjct: 156 KKEGGLGIKSIKEWNKIALLKHIWNLCNDSDGSIWSTWIRSNLLRGRNFWTIKTPQNCSW 215

Query: 479 XXXXXXXXXXXXXEYVSIQVGNGRICNFLYENCHHLGPLHRVLIEREISLMRVQECDSIA 300
                          +   +G+G   +  ++N H   PL     ER I    + +   + 
Sbjct: 216 AWGKILKLRSLAWPKMKYIIGDGMTTSLWFDNWHPHSPLADSYGERFIYDSGMAKNAKVN 275

Query: 299 DVVGRNH*VNDRKLSPNIDEV*KSLPSLSE----REDRTIWIN--NQQFSCAKVW*KLR* 138
            ++  +        +     + +++PS S     ++D  +W++  N +FS    W +LR 
Sbjct: 276 VLIQNSEWKTPTTQAIGWHPIIEAIPSNSNPKMGQKDELVWLDSPNHRFSVKVAWEQLRR 335

Query: 137 EEARVSWFKVVWIKDNIPSHCMTTWMLCVGRLPTRDRLKAWGV 9
               V W  +VW K+ +P H    WM    +L T+D+L  +G+
Sbjct: 336 HRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLTTQDKLHRFGI 378


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
            thaliana]
          Length = 1072

 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 64/226 (28%), Positives = 91/226 (40%), Gaps = 9/226 (3%)
 Frame = -1

Query: 656  KEEGGLGIKRLQVWNKACMSFHIWNLCSHKETL*VKLIHSFRLKGQCFWAAKSKNTDSXX 477
            K EGGLG +    WNK  +   IW L     +L  +     RL    FW   +  TD   
Sbjct: 722  KSEGGLGFRSFGEWNKTLLLRLIWVLFDRDTSLWAQWQRHHRLGHASFWQVNALQTDPWT 781

Query: 476  XXXXXXXXXXXXEYVSIQVGNGRICNFLYENCHHLGPLHRVLIEREISLMRVQECDSIAD 297
                        +++  +VGNG   +F ++    LGPL + L +     +R+     +AD
Sbjct: 782  WKMLLNLRPLAEKFIKAKVGNGGTVSFWFDCWTSLGPLIKYLGDVGSRPLRIPFSAKVAD 841

Query: 296  VVGRNH*VNDRKLSPNIDEV*KSLPSLSERE-----DRTIW----INNQQFSCAKVW*KL 144
             +  +        S   D +   L SL         D   W    ++ Q FS AK W  L
Sbjct: 842  AIDGSGWRLPLSRSLTADSILSHLASLPPPSPLMVSDSYSWCVDDVDCQGFSAAKTWEVL 901

Query: 143  R*EEARVSWFKVVWIKDNIPSHCMTTWMLCVGRLPTRDRLKAWGVI 6
            R       W K VW K  +P H    W   + RLPTR RL +WG++
Sbjct: 902  RPRRPVKRWAKSVWFKGAVPKHAFNFWTAQLNRLPTRQRLVSWGLV 947


>emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|7267871|emb|CAB78214.1|
           putative protein [Arabidopsis thaliana]
          Length = 473

 Score = 90.5 bits (223), Expect = 3e-16
 Identities = 64/228 (28%), Positives = 99/228 (43%), Gaps = 10/228 (4%)
 Frame = -1

Query: 662 KNKEEGGLGIKRLQVWNKACMSFHIWNLCSHKETL*VKLIHSFRLKGQCFWAAKSKNT-D 486
           K KEEGGLG++ L+  N  C    IW + SH ++L VK I S  LK   FWA +   +  
Sbjct: 116 KPKEEGGLGLRSLKEANDVCCLKLIWRIISHADSLWVKWIQSSLLKKVSFWAVRENTSLG 175

Query: 485 SXXXXXXXXXXXXXXEYVSIQVGNGRICNFLYENCHHLGPLHRVLIEREISLMRVQECDS 306
           S                  +++ NG   +F Y++   LG L     +R    + + +  +
Sbjct: 176 SWMWRKILKFRDIARTLCKVEINNGARTSFWYDDWSDLGRLIDSAGDRGAIDLGINKHAT 235

Query: 305 IADVVG----RNH*VNDRKLSPNIDEV*KSLPSLSEREDRTIWINNQQ-----FSCAKVW 153
           + +  G    R H  N   L+   + +  S  S ++ EDR +W   +      FS    W
Sbjct: 236 VVEAWGNRRRRRHRTN--FLNRVEERLILSWNSRNQAEDRALWKGKENRFRSIFSTKDTW 293

Query: 152 *KLR*EEARVSWFKVVWIKDNIPSHCMTTWMLCVGRLPTRDRLKAWGV 9
             +R    +V+W+K VW    IP H    W+    RL T DR+  W +
Sbjct: 294 NHIRTVSNKVAWYKGVWFAQAIPKHAFCMWLAVHNRLSTGDRMTLWNM 341


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