BLASTX nr result

ID: Lithospermum22_contig00041010 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00041010
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    81   1e-13
ref|XP_003544295.1| PREDICTED: zinc finger CCCH domain-containin...    62   4e-08
gb|ABD33260.1| non-LTR retroelement reverse transcriptase-like p...    60   1e-07
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]            60   2e-07
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...    60   2e-07

>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 41/99 (41%), Positives = 56/99 (56%)
 Frame = +3

Query: 9   LIKSVIFGIYNYWCQ*IFLPCQVIKDICLKCPGIVFCLVNY*QKMSKA*LWSGKSSGRYM 188
           LI SV+F I  YW     LP QVIK++               +++ K+ LWSG       
Sbjct: 100 LINSVLFSIQVYWASLFLLPGQVIKNV---------------EQIMKSFLWSGSDMRTTG 144

Query: 189 PKVSWKKVTMSKKEGGLGIKGIYVWNQASMAKHLWNLCS 305
            KV+W +V + KKEGGLGIK I  WN+ ++ KH+WNLC+
Sbjct: 145 AKVAWDQVCLPKKEGGLGIKSIKEWNKIALLKHIWNLCN 183


>ref|XP_003544295.1| PREDICTED: zinc finger CCCH domain-containing protein 66-like
           [Glycine max]
          Length = 1089

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 36/97 (37%), Positives = 48/97 (49%)
 Frame = +3

Query: 9   LIKSVIFGIYNYWCQ*IFLPCQVIKDICLKCPGIVFCLVNY*QKMSKA*LWSGKSSGRYM 188
           L++SVIF   NYW Q + LP  VI+ I   C               ++ LW+GKS     
Sbjct: 92  LLRSVIFATANYWMQCLPLPKGVIRRIEAVC---------------RSFLWTGKSCVTKK 136

Query: 189 PKVSWKKVTMSKKEGGLGIKGIYVWNQASMAKHLWNL 299
             V+W KV   K +GGL +     WN+A + K LWNL
Sbjct: 137 SPVAWNKVCAPKNQGGLNVINFQSWNKACLIKLLWNL 173


>gb|ABD33260.1| non-LTR retroelement reverse transcriptase-like protein, related
           [Medicago truncatula]
          Length = 120

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 33/96 (34%), Positives = 49/96 (51%)
 Frame = +3

Query: 3   LVLIKSVIFGIYNYWCQ*IFLPCQVIKDICLKCPGIVFCLVNY*QKMSKA*LWSGKSSGR 182
           L LIKSV+FG+  YW Q   LP +V+K I   C               +  LW+GKS   
Sbjct: 40  LQLIKSVLFGVQTYWSQVFVLPQKVLKLIQTAC---------------RVFLWTGKSGTS 84

Query: 183 YMPKVSWKKVTMSKKEGGLGIKGIYVWNQASMAKHL 290
               ++W+++ + K  GG  +  + VWNQA++ K L
Sbjct: 85  KRALIAWERICLPKTAGGWNVIDLKVWNQAAICKLL 120


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 34/97 (35%), Positives = 43/97 (44%)
 Frame = +3

Query: 9   LIKSVIFGIYNYWCQ*IFLPCQVIKDICLKCPGIVFCLVNY*QKMSKA*LWSGKSSGRYM 188
           LI SVIFG+ N+W     LP   IK I   C                  LW+G   GR  
Sbjct: 666 LISSVIFGLINFWMSTFLLPKGCIKKIESLCSKF---------------LWAGSIDGRKS 710

Query: 189 PKVSWKKVTMSKKEGGLGIKGIYVWNQASMAKHLWNL 299
            KVSW    + K EGGLG +    WN+  + + +W L
Sbjct: 711 SKVSWVDCCLPKSEGGLGFRSFGEWNKTLLLRLIWVL 747


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 35/101 (34%), Positives = 47/101 (46%)
 Frame = +3

Query: 3    LVLIKSVIFGIYNYWCQ*IFLPCQVIKDICLKCPGIVFCLVNY*QKMSKA*LWSGKSSGR 182
            L L+ SVI  I N+W     LP   I++I               +K+  A LWSG     
Sbjct: 1108 LALLNSVIVSIANFWMSAYRLPAGCIREI---------------EKLCSAFLWSGPVLNP 1152

Query: 183  YMPKVSWKKVTMSKKEGGLGIKGIYVWNQASMAKHLWNLCS 305
               K++W  +   KKEGGLGIK +   N+ S  K +W L S
Sbjct: 1153 KKAKIAWSSICQPKKEGGLGIKSLAEANKVSCLKLIWRLLS 1193


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