BLASTX nr result
ID: Lithospermum22_contig00041010
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Lithospermum22_contig00041010 (307 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2... 81 1e-13 ref|XP_003544295.1| PREDICTED: zinc finger CCCH domain-containin... 62 4e-08 gb|ABD33260.1| non-LTR retroelement reverse transcriptase-like p... 60 1e-07 dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] 60 2e-07 gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 60 2e-07 >ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1| predicted protein [Populus trichocarpa] Length = 517 Score = 80.9 bits (198), Expect = 1e-13 Identities = 41/99 (41%), Positives = 56/99 (56%) Frame = +3 Query: 9 LIKSVIFGIYNYWCQ*IFLPCQVIKDICLKCPGIVFCLVNY*QKMSKA*LWSGKSSGRYM 188 LI SV+F I YW LP QVIK++ +++ K+ LWSG Sbjct: 100 LINSVLFSIQVYWASLFLLPGQVIKNV---------------EQIMKSFLWSGSDMRTTG 144 Query: 189 PKVSWKKVTMSKKEGGLGIKGIYVWNQASMAKHLWNLCS 305 KV+W +V + KKEGGLGIK I WN+ ++ KH+WNLC+ Sbjct: 145 AKVAWDQVCLPKKEGGLGIKSIKEWNKIALLKHIWNLCN 183 >ref|XP_003544295.1| PREDICTED: zinc finger CCCH domain-containing protein 66-like [Glycine max] Length = 1089 Score = 62.4 bits (150), Expect = 4e-08 Identities = 36/97 (37%), Positives = 48/97 (49%) Frame = +3 Query: 9 LIKSVIFGIYNYWCQ*IFLPCQVIKDICLKCPGIVFCLVNY*QKMSKA*LWSGKSSGRYM 188 L++SVIF NYW Q + LP VI+ I C ++ LW+GKS Sbjct: 92 LLRSVIFATANYWMQCLPLPKGVIRRIEAVC---------------RSFLWTGKSCVTKK 136 Query: 189 PKVSWKKVTMSKKEGGLGIKGIYVWNQASMAKHLWNL 299 V+W KV K +GGL + WN+A + K LWNL Sbjct: 137 SPVAWNKVCAPKNQGGLNVINFQSWNKACLIKLLWNL 173 >gb|ABD33260.1| non-LTR retroelement reverse transcriptase-like protein, related [Medicago truncatula] Length = 120 Score = 60.5 bits (145), Expect = 1e-07 Identities = 33/96 (34%), Positives = 49/96 (51%) Frame = +3 Query: 3 LVLIKSVIFGIYNYWCQ*IFLPCQVIKDICLKCPGIVFCLVNY*QKMSKA*LWSGKSSGR 182 L LIKSV+FG+ YW Q LP +V+K I C + LW+GKS Sbjct: 40 LQLIKSVLFGVQTYWSQVFVLPQKVLKLIQTAC---------------RVFLWTGKSGTS 84 Query: 183 YMPKVSWKKVTMSKKEGGLGIKGIYVWNQASMAKHL 290 ++W+++ + K GG + + VWNQA++ K L Sbjct: 85 KRALIAWERICLPKTAGGWNVIDLKVWNQAAICKLL 120 >dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] Length = 1072 Score = 59.7 bits (143), Expect = 2e-07 Identities = 34/97 (35%), Positives = 43/97 (44%) Frame = +3 Query: 9 LIKSVIFGIYNYWCQ*IFLPCQVIKDICLKCPGIVFCLVNY*QKMSKA*LWSGKSSGRYM 188 LI SVIFG+ N+W LP IK I C LW+G GR Sbjct: 666 LISSVIFGLINFWMSTFLLPKGCIKKIESLCSKF---------------LWAGSIDGRKS 710 Query: 189 PKVSWKKVTMSKKEGGLGIKGIYVWNQASMAKHLWNL 299 KVSW + K EGGLG + WN+ + + +W L Sbjct: 711 SKVSWVDCCLPKSEGGLGFRSFGEWNKTLLLRLIWVL 747 >gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1529 Score = 59.7 bits (143), Expect = 2e-07 Identities = 35/101 (34%), Positives = 47/101 (46%) Frame = +3 Query: 3 LVLIKSVIFGIYNYWCQ*IFLPCQVIKDICLKCPGIVFCLVNY*QKMSKA*LWSGKSSGR 182 L L+ SVI I N+W LP I++I +K+ A LWSG Sbjct: 1108 LALLNSVIVSIANFWMSAYRLPAGCIREI---------------EKLCSAFLWSGPVLNP 1152 Query: 183 YMPKVSWKKVTMSKKEGGLGIKGIYVWNQASMAKHLWNLCS 305 K++W + KKEGGLGIK + N+ S K +W L S Sbjct: 1153 KKAKIAWSSICQPKKEGGLGIKSLAEANKVSCLKLIWRLLS 1193