BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00041003
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa...    58   7e-07

>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
           19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
           putative retrotransposon protein [Arabidopsis thaliana]
          Length = 964

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 35/89 (39%), Positives = 52/89 (58%), Gaps = 6/89 (6%)
 Frame = +1

Query: 133 QPTLRRFERNRR*PNH---WYGE---AFLVESHESTSYEEAITSTDTDTRLIVMKSDMDS 294
           +P +RR ER+R  P+    W  +    F++ES E TSYEEA+   D+D  L   KS+M+S
Sbjct: 408 EPEVRRSERSRHEPDRFRDWVMDDHALFMIESDEPTSYEEALMGPDSDKWLEAAKSEMES 467

Query: 295 MYQKKV*SLLDLLNGVPRLSVNGYSKRNM 381
           M Q KV +L+DL +GV  +      K+ +
Sbjct: 468 MSQNKVWTLVDLPDGVKPIECKWIFKKKI 496