BLASTX nr result

ID: Lithospermum22_contig00040986 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00040986
         (449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFH57270.1| RAV [Gossypium hirsutum]                                99   5e-19
gb|ACT33043.1| RAV transcription factor [Camellia sinensis]            97   2e-18
emb|CBI27062.3| unnamed protein product [Vitis vinifera]               94   2e-17
ref|XP_002281709.1| PREDICTED: AP2/ERF and B3 domain-containing ...    94   2e-17
ref|XP_002524409.1| DNA-binding protein RAV1, putative [Ricinus ...    94   2e-17

>gb|AFH57270.1| RAV [Gossypium hirsutum]
          Length = 357

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 53/91 (58%), Positives = 69/91 (75%), Gaps = 4/91 (4%)
 Frame = -2

Query: 448 RFVKDKDMVAGDIVSFHKSTGPEKKFYIECKSRKGVENPVK-PVQMLRLFGVNIVK---A 281
           RFVK+K++ AGDIVSF +STG EK+ YI+ K+R G+ + ++ PVQM+RLFGVNI K   +
Sbjct: 264 RFVKEKNLKAGDIVSFQRSTGTEKQLYIDWKARTGLGSGLENPVQMVRLFGVNIFKMPGS 323

Query: 280 TQVVMDDSCSGKRNREMGILGLECSKKQRVI 188
             V +   C+GKR REM +L LECSKKQRVI
Sbjct: 324 ENVGLAGGCNGKRTREMELLELECSKKQRVI 354


>gb|ACT33043.1| RAV transcription factor [Camellia sinensis]
          Length = 362

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 50/88 (56%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
 Frame = -2

Query: 448 RFVKDKDMVAGDIVSFHKSTGPEKKFYIECKSRKGVENPVKPVQMLRLFGVNIVKA-TQV 272
           RFVK+K + AGDIVSF++STG + + +I+ K R G    V+PVQM+RLFGVNI K     
Sbjct: 272 RFVKEKSLKAGDIVSFYRSTGSDNQLFIDWKPRNGSNPVVQPVQMVRLFGVNIFKVPISG 331

Query: 271 VMDDSCSGKRNREMGILGLECSKKQRVI 188
            +D +C GKR REM +L LECSKK RVI
Sbjct: 332 GLDSNCGGKRMREMELLALECSKKVRVI 359


>emb|CBI27062.3| unnamed protein product [Vitis vinifera]
          Length = 228

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 52/95 (54%), Positives = 67/95 (70%), Gaps = 8/95 (8%)
 Frame = -2

Query: 448 RFVKDKDMVAGDIVSFHKSTGPEKKFYIECKSRKGVE---NPVKPVQMLRLFGVNIVK-- 284
           RFVK+K++ AGDIVSF +STG +K+ YI+ K+R G     NPV+PV+M+RLFGVNI K  
Sbjct: 131 RFVKEKNLKAGDIVSFQRSTGGDKQLYIDWKARNGPTNQINPVEPVEMVRLFGVNIFKVP 190

Query: 283 ---ATQVVMDDSCSGKRNREMGILGLECSKKQRVI 188
              +  V  + S +GKR  EM +L  ECSKKQRVI
Sbjct: 191 VNSSVVVANNGSWTGKRMIEMELLSFECSKKQRVI 225


>ref|XP_002281709.1| PREDICTED: AP2/ERF and B3 domain-containing transcription repressor
           TEM1-like [Vitis vinifera]
          Length = 358

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 52/95 (54%), Positives = 67/95 (70%), Gaps = 8/95 (8%)
 Frame = -2

Query: 448 RFVKDKDMVAGDIVSFHKSTGPEKKFYIECKSRKGVE---NPVKPVQMLRLFGVNIVK-- 284
           RFVK+K++ AGDIVSF +STG +K+ YI+ K+R G     NPV+PV+M+RLFGVNI K  
Sbjct: 261 RFVKEKNLKAGDIVSFQRSTGGDKQLYIDWKARNGPTNQINPVEPVEMVRLFGVNIFKVP 320

Query: 283 ---ATQVVMDDSCSGKRNREMGILGLECSKKQRVI 188
              +  V  + S +GKR  EM +L  ECSKKQRVI
Sbjct: 321 VNSSVVVANNGSWTGKRMIEMELLSFECSKKQRVI 355


>ref|XP_002524409.1| DNA-binding protein RAV1, putative [Ricinus communis]
           gi|223536370|gb|EEF38020.1| DNA-binding protein RAV1,
           putative [Ricinus communis]
          Length = 371

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 53/94 (56%), Positives = 65/94 (69%), Gaps = 7/94 (7%)
 Frame = -2

Query: 448 RFVKDKDMVAGDIVSFHKSTGPEKKFYIECKSRK---GVENPV----KPVQMLRLFGVNI 290
           RFVK+K++ AGDIV F KSTGP+K+ YI+ K R     V NPV    +PVQM+RLFGVNI
Sbjct: 275 RFVKEKNLKAGDIVRFLKSTGPDKQLYIDWKVRTLTPTVSNPVVCSVQPVQMVRLFGVNI 334

Query: 289 VKATQVVMDDSCSGKRNREMGILGLECSKKQRVI 188
            K       + C+GKR REM +L L+C KKQRVI
Sbjct: 335 FKVPGNSHIEGCNGKRIREMELLSLDCIKKQRVI 368


Top