BLASTX nr result

ID: Lithospermum22_contig00040981 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00040981
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACY01922.1| hypothetical protein [Beta vulgaris]                   117   1e-24
ref|XP_002529728.1| DNA cross-link repair protein pso2/snm1, put...   115   4e-24
emb|CBI37538.3| unnamed protein product [Vitis vinifera]              114   6e-24
ref|XP_002274308.1| PREDICTED: 5' exonuclease Apollo-like [Vitis...   114   6e-24
gb|AAF79287.1|AC068602_10 F14D16.17 [Arabidopsis thaliana]            109   3e-22

>gb|ACY01922.1| hypothetical protein [Beta vulgaris]
          Length = 551

 Score =  117 bits (292), Expect = 1e-24
 Identities = 51/75 (68%), Positives = 65/75 (86%)
 Frame = +3

Query: 72  TLYASFPIYSTEITKSILLIHYPKLDESLFVNIEIGQTLVIEDPDGDFSVTAFHANHCPG 251
           T Y SFPIYST +TKS++L ++P+LDESLFV IE+GQ+++++DPDG F+VTAF ANHCPG
Sbjct: 40  TSYFSFPIYSTLLTKSLILCYFPQLDESLFVQIEVGQSIIVDDPDGAFTVTAFDANHCPG 99

Query: 252 AIMVLFEGGFGNYLH 296
           A+M LFEG FGN LH
Sbjct: 100 AVMFLFEGEFGNILH 114


>ref|XP_002529728.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
           communis] gi|223530792|gb|EEF32657.1| DNA cross-link
           repair protein pso2/snm1, putative [Ricinus communis]
          Length = 543

 Score =  115 bits (288), Expect = 4e-24
 Identities = 50/77 (64%), Positives = 67/77 (87%)
 Frame = +3

Query: 66  GTTLYASFPIYSTEITKSILLIHYPKLDESLFVNIEIGQTLVIEDPDGDFSVTAFHANHC 245
           G   ++S+PIY+T +TKS+LL+++P+L++SLFV IE+GQ+LVI+DP G+FSVTAF ANHC
Sbjct: 38  GILAHSSYPIYATHLTKSLLLLYFPQLEDSLFVGIEVGQSLVIDDPYGNFSVTAFDANHC 97

Query: 246 PGAIMVLFEGGFGNYLH 296
           PGA+M LFEG FGN LH
Sbjct: 98  PGAVMFLFEGSFGNILH 114


>emb|CBI37538.3| unnamed protein product [Vitis vinifera]
          Length = 558

 Score =  114 bits (286), Expect = 6e-24
 Identities = 49/79 (62%), Positives = 66/79 (83%)
 Frame = +3

Query: 60  SIGTTLYASFPIYSTEITKSILLIHYPKLDESLFVNIEIGQTLVIEDPDGDFSVTAFHAN 239
           S G + ++++PIYST +TK+++L  YP+LD+SLFV IE+GQ++V++DPDG F VTAF AN
Sbjct: 70  SSGISTHSAYPIYSTHLTKTLILQQYPQLDDSLFVGIEVGQSMVVDDPDGRFGVTAFDAN 129

Query: 240 HCPGAIMVLFEGGFGNYLH 296
           HCPGA+M LFEG FGN LH
Sbjct: 130 HCPGAVMFLFEGDFGNILH 148


>ref|XP_002274308.1| PREDICTED: 5' exonuclease Apollo-like [Vitis vinifera]
          Length = 552

 Score =  114 bits (286), Expect = 6e-24
 Identities = 49/79 (62%), Positives = 66/79 (83%)
 Frame = +3

Query: 60  SIGTTLYASFPIYSTEITKSILLIHYPKLDESLFVNIEIGQTLVIEDPDGDFSVTAFHAN 239
           S G + ++++PIYST +TK+++L  YP+LD+SLFV IE+GQ++V++DPDG F VTAF AN
Sbjct: 36  SSGISTHSAYPIYSTHLTKTLILQQYPQLDDSLFVGIEVGQSMVVDDPDGRFGVTAFDAN 95

Query: 240 HCPGAIMVLFEGGFGNYLH 296
           HCPGA+M LFEG FGN LH
Sbjct: 96  HCPGAVMFLFEGDFGNILH 114


>gb|AAF79287.1|AC068602_10 F14D16.17 [Arabidopsis thaliana]
          Length = 612

 Score =  109 bits (272), Expect = 3e-22
 Identities = 47/70 (67%), Positives = 59/70 (84%)
 Frame = +3

Query: 87  FPIYSTEITKSILLIHYPKLDESLFVNIEIGQTLVIEDPDGDFSVTAFHANHCPGAIMVL 266
           FPIYST +T S+LL  +P+LDES FV +EIGQ+++++DPDG+F VTAF ANHCPGA+M L
Sbjct: 113 FPIYSTSLTISLLLQRFPQLDESYFVRVEIGQSVIVDDPDGEFKVTAFDANHCPGAVMFL 172

Query: 267 FEGGFGNYLH 296
           FEG FGN LH
Sbjct: 173 FEGSFGNILH 182


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