BLASTX nr result

ID: Lithospermum22_contig00040960 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00040960
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280967.1| PREDICTED: UDP-glucuronate 4-epimerase 3-lik...    99   4e-19
emb|CAN73016.1| hypothetical protein VITISV_004388 [Vitis vinifera]    97   2e-18
ref|XP_002280994.2| PREDICTED: UDP-glucuronate 4-epimerase 3-lik...    95   7e-18
ref|XP_002872971.1| UDP-D-glucuronate 4-epimerase 2 [Arabidopsis...    91   8e-17
ref|XP_002281007.1| PREDICTED: UDP-glucuronate 4-epimerase 3-lik...    91   8e-17

>ref|XP_002280967.1| PREDICTED: UDP-glucuronate 4-epimerase 3-like [Vitis vinifera]
          Length = 433

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 53/75 (70%), Positives = 63/75 (84%), Gaps = 1/75 (1%)
 Frame = -3

Query: 223 SLAKITFWSLVFVFLIYVSFFRAPSSASQTSHSDPSRRSLRTSSYGD-AWEKRVRASAKI 47
           SLAK+TFWS VF+ LI++ FF +PSS+S  S  DPSRRSLRT S+G  AWEKRVR+SAK+
Sbjct: 31  SLAKLTFWSFVFLGLIFIFFFLSPSSSSLPS--DPSRRSLRTYSWGGPAWEKRVRSSAKV 88

Query: 46  RSHNGISVLVTGAAG 2
           R+ NGISVLVTGAAG
Sbjct: 89  RARNGISVLVTGAAG 103


>emb|CAN73016.1| hypothetical protein VITISV_004388 [Vitis vinifera]
          Length = 427

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 52/75 (69%), Positives = 62/75 (82%), Gaps = 1/75 (1%)
 Frame = -3

Query: 223 SLAKITFWSLVFVFLIYVSFFRAPSSASQTSHSDPSRRSLRTSSYGD-AWEKRVRASAKI 47
           SLAK+TFWS VF+ LI++ FF +PSS+S  S  DPSRRSLRT S+G  AWEKRVR+SAK+
Sbjct: 25  SLAKLTFWSFVFLGLIFIFFFLSPSSSSLPS--DPSRRSLRTYSWGGPAWEKRVRSSAKV 82

Query: 46  RSHNGISVLVTGAAG 2
            + NGISVLVTGAAG
Sbjct: 83  XARNGISVLVTGAAG 97


>ref|XP_002280994.2| PREDICTED: UDP-glucuronate 4-epimerase 3-like [Vitis vinifera]
          Length = 512

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 51/75 (68%), Positives = 61/75 (81%), Gaps = 1/75 (1%)
 Frame = -3

Query: 223 SLAKITFWSLVFVFLIYVSFFRAPSSASQTSHSDPSRRSLRTSSYGD-AWEKRVRASAKI 47
           SLAK+TFWS VF  LI++  F +PSS+S  S  DP+RRSLRT S+G  AWEKRVR+SAK+
Sbjct: 110 SLAKLTFWSFVFSGLIFIVLFLSPSSSSLPS--DPTRRSLRTHSWGGPAWEKRVRSSAKV 167

Query: 46  RSHNGISVLVTGAAG 2
           R+ NGISVLVTGAAG
Sbjct: 168 RARNGISVLVTGAAG 182


>ref|XP_002872971.1| UDP-D-glucuronate 4-epimerase 2 [Arabidopsis lyrata subsp. lyrata]
           gi|297318808|gb|EFH49230.1| UDP-D-glucuronate
           4-epimerase 2 [Arabidopsis lyrata subsp. lyrata]
          Length = 429

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 48/75 (64%), Positives = 60/75 (80%), Gaps = 1/75 (1%)
 Frame = -3

Query: 223 SLAKITFWSLVFVFLIYVSFFRAPSSASQTSHSDPSRRSLRTSSYGD-AWEKRVRASAKI 47
           S+AK+ FWSLVFV LI++ F+R+P S    S+ DPSRRSLRT S+G  AWEKRVR+SA++
Sbjct: 29  SVAKLAFWSLVFVGLIFIFFYRSPVS----SNPDPSRRSLRTYSWGGPAWEKRVRSSARV 84

Query: 46  RSHNGISVLVTGAAG 2
           R+  G SVLVTGAAG
Sbjct: 85  RTRRGFSVLVTGAAG 99


>ref|XP_002281007.1| PREDICTED: UDP-glucuronate 4-epimerase 3-like isoform 1 [Vitis
           vinifera]
          Length = 433

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 50/75 (66%), Positives = 60/75 (80%), Gaps = 1/75 (1%)
 Frame = -3

Query: 223 SLAKITFWSLVFVFLIYVSFFRAPSSASQTSHSDPSRRSLRTSSYGD-AWEKRVRASAKI 47
           SLAK+TFWS VF  LI++ FFR+PSS+S  S  D S RS R+ S+G  AWEKRVR+SAK+
Sbjct: 31  SLAKLTFWSFVFSGLIFIFFFRSPSSSSLPS--DSSIRSFRSYSWGGPAWEKRVRSSAKV 88

Query: 46  RSHNGISVLVTGAAG 2
           R+ NGISVLVTGAAG
Sbjct: 89  RARNGISVLVTGAAG 103


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