BLASTX nr result

ID: Lithospermum22_contig00040951 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00040951
         (219 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_177046.1| little nuclei3 protein [Arabidopsis thaliana] g...    71   1e-10
ref|XP_002524388.1| ATP binding protein, putative [Ricinus commu...    69   3e-10
ref|XP_002312375.1| predicted protein [Populus trichocarpa] gi|2...    69   5e-10
ref|XP_002888682.1| hypothetical protein ARALYDRAFT_476006 [Arab...    67   2e-09
gb|ACJ86244.1| unknown [Medicago truncatula] gi|388508822|gb|AFK...    65   4e-09

>ref|NP_177046.1| little nuclei3 protein [Arabidopsis thaliana]
           gi|12324133|gb|AAG52034.1|AC011914_4 putative nuclear
           matrix constituent protein 1 (NMCP1); 58331-62556
           [Arabidopsis thaliana] gi|332196718|gb|AEE34839.1|
           little nuclei3 protein [Arabidopsis thaliana]
          Length = 1085

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 36/63 (57%), Positives = 44/63 (69%)
 Frame = -3

Query: 190 PQRKRTRENIIDWQRFKEVGLLDEEGXXXXXXXXXXXRVEQLQKELFDYQYNMGLLLIEK 11
           PQR   RE+  DWQ+FKEVGLLDE             ++ +L+KELFDYQ+NMGLLLIEK
Sbjct: 30  PQRVLLREDD-DWQKFKEVGLLDEASLERKDRDALIEKILKLEKELFDYQHNMGLLLIEK 88

Query: 10  KEW 2
           K+W
Sbjct: 89  KQW 91


>ref|XP_002524388.1| ATP binding protein, putative [Ricinus communis]
           gi|223536349|gb|EEF37999.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 1172

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/56 (58%), Positives = 39/56 (69%)
 Frame = -3

Query: 169 ENIIDWQRFKEVGLLDEEGXXXXXXXXXXXRVEQLQKELFDYQYNMGLLLIEKKEW 2
           E++ DW+RFKE GLLDE             +  +L+KELFDYQYNMGLLLIEKKEW
Sbjct: 65  EDMEDWRRFKEAGLLDEAVMERKDRQALIEKASRLEKELFDYQYNMGLLLIEKKEW 120


>ref|XP_002312375.1| predicted protein [Populus trichocarpa] gi|222852195|gb|EEE89742.1|
           predicted protein [Populus trichocarpa]
          Length = 1008

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 32/56 (57%), Positives = 39/56 (69%)
 Frame = -3

Query: 169 ENIIDWQRFKEVGLLDEEGXXXXXXXXXXXRVEQLQKELFDYQYNMGLLLIEKKEW 2
           E++  W+RF+EVGLLDE             +  +L+KELFDYQYNMGLLLIEKKEW
Sbjct: 49  EDVEAWRRFREVGLLDEAAMERRDREALLEKASRLEKELFDYQYNMGLLLIEKKEW 104


>ref|XP_002888682.1| hypothetical protein ARALYDRAFT_476006 [Arabidopsis lyrata subsp.
           lyrata] gi|297334523|gb|EFH64941.1| hypothetical protein
           ARALYDRAFT_476006 [Arabidopsis lyrata subsp. lyrata]
          Length = 1085

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 34/63 (53%), Positives = 43/63 (68%)
 Frame = -3

Query: 190 PQRKRTRENIIDWQRFKEVGLLDEEGXXXXXXXXXXXRVEQLQKELFDYQYNMGLLLIEK 11
           PQ    RE+  DW++FKEVGLLDE             ++ +L+KELFDYQ+NMGLLLIEK
Sbjct: 30  PQTVLLREDD-DWRKFKEVGLLDEASLERKDRDALIEKILKLEKELFDYQHNMGLLLIEK 88

Query: 10  KEW 2
           K+W
Sbjct: 89  KKW 91


>gb|ACJ86244.1| unknown [Medicago truncatula] gi|388508822|gb|AFK42477.1| unknown
           [Medicago truncatula]
          Length = 194

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 29/52 (55%), Positives = 38/52 (73%)
 Frame = -3

Query: 157 DWQRFKEVGLLDEEGXXXXXXXXXXXRVEQLQKELFDYQYNMGLLLIEKKEW 2
           DW++F+EVGLLDE             ++ +L+KEL+DYQYNMGLLLIEK+EW
Sbjct: 67  DWKKFREVGLLDEAVMKRKDDEAMMEKISRLEKELYDYQYNMGLLLIEKQEW 118


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