BLASTX nr result

ID: Lithospermum22_contig00040943 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00040943
         (525 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531110.1| conserved hypothetical protein [Ricinus comm...   143   1e-32
emb|CAN80353.1| hypothetical protein VITISV_003141 [Vitis vinifera]   131   7e-29
ref|XP_003597323.1| RING finger family protein [Medicago truncat...   109   3e-22
ref|XP_003606612.1| hypothetical protein MTR_4g063070 [Medicago ...   105   4e-21
ref|XP_004152751.1| PREDICTED: RING-H2 finger protein ATL54-like...    95   5e-18

>ref|XP_002531110.1| conserved hypothetical protein [Ricinus communis]
           gi|223529306|gb|EEF31275.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 199

 Score =  143 bits (361), Expect = 1e-32
 Identities = 76/130 (58%), Positives = 95/130 (73%), Gaps = 5/130 (3%)
 Frame = +2

Query: 41  LGTFPVDAGP--MRRLNQQ--ADNSVGFDQSQGLDSYIMHSLPITEFKKSMKELPPTST- 205
           L T  V   P  MRRLN+    D+S+    S GL+S IMHSLPIT+FK   +E P  S  
Sbjct: 32  LNTLSVSRHPVQMRRLNESNIQDSSLQI-HSHGLESTIMHSLPITQFKNKKEEEPRVSNN 90

Query: 206 DCAVCLGEFEDGEWLKSLPNCSHVFHVACIDTWFQTHSSCPLCRSYVNNLSMQRDHTIVI 385
           +CAVCLGE+E+GEWLK LPNC+HVFHVACIDTWFQTHS+CPLCRS+V +LS   ++++ I
Sbjct: 91  ECAVCLGEYEEGEWLKHLPNCAHVFHVACIDTWFQTHSNCPLCRSHVYDLS--HEYSMSI 148

Query: 386 HTLLDTLREE 415
           + LL+T R E
Sbjct: 149 NILLETPRRE 158


>emb|CAN80353.1| hypothetical protein VITISV_003141 [Vitis vinifera]
          Length = 209

 Score =  131 bits (329), Expect = 7e-29
 Identities = 62/100 (62%), Positives = 81/100 (81%), Gaps = 1/100 (1%)
 Frame = +2

Query: 119 SQGLDSYIMHSLPITEFKKSMKELPPTS-TDCAVCLGEFEDGEWLKSLPNCSHVFHVACI 295
           S+GLDS  ++SLPI +FKK+  E P  S TDCAVCLGEFE+GE+LK LPNCSHVFH+ CI
Sbjct: 31  SRGLDSSTVYSLPIAQFKKN--EGPSHSNTDCAVCLGEFEEGEFLKHLPNCSHVFHIPCI 88

Query: 296 DTWFQTHSSCPLCRSYVNNLSMQRDHTIVIHTLLDTLREE 415
           DTWF++HS+CPLCRS+V + +M  + +  ++TLL+TLR E
Sbjct: 89  DTWFESHSNCPLCRSHVYDFTMDNEFSGSMYTLLETLRRE 128


>ref|XP_003597323.1| RING finger family protein [Medicago truncatula]
           gi|355486371|gb|AES67574.1| RING finger family protein
           [Medicago truncatula]
          Length = 219

 Score =  109 bits (272), Expect = 3e-22
 Identities = 55/115 (47%), Positives = 75/115 (65%), Gaps = 2/115 (1%)
 Frame = +2

Query: 116 QSQGLDSYIMHSLPITEFKKSMKELPPTSTDCAVCLGEFEDGEWLKSLPNCSHVFHVACI 295
           Q   L+  I++SLP+ +FKK+  +    + DCA+CLGEFE GE LK LPNC+H FHV+CI
Sbjct: 104 QGSDLELSIINSLPMYQFKKNEAQEMTINVDCAICLGEFEGGELLKLLPNCNHGFHVSCI 163

Query: 296 DTWFQTHSSCPLCRSYVNN-LSMQRDHTIVIHTLLDTL-REEAHQERLGHLQISS 454
           D WFQ HSSCPLCRS V   L    ++++ ++T L+ L  ++   ER  H Q  S
Sbjct: 164 DKWFQLHSSCPLCRSRVYRVLVANNEYSVSLNTWLEILGMDDITPERNAHFQSHS 218


>ref|XP_003606612.1| hypothetical protein MTR_4g063070 [Medicago truncatula]
           gi|355507667|gb|AES88809.1| hypothetical protein
           MTR_4g063070 [Medicago truncatula]
          Length = 396

 Score =  105 bits (262), Expect = 4e-21
 Identities = 51/105 (48%), Positives = 72/105 (68%), Gaps = 6/105 (5%)
 Frame = +2

Query: 74  RRLNQQAD----NSVGFDQSQGLDSYIMHSLPITEFKKSMKELPPTSTDCAVCLGEFEDG 241
           RRL + A+    NS     + GL+  ++ +LP+ +FKK+  E   +  DCA+CLGEFE+G
Sbjct: 287 RRLPELANFYPSNSSRHVLNSGLEYSMVQALPMFQFKKNEVEQKLSDVDCAICLGEFEEG 346

Query: 242 EWLKSLPNCSHVFHVACIDTWFQTHSSCPLCRSYV--NNLSMQRD 370
           EW+K LP C+H FHV+CID WFQ+HS+CPLCR +V  ++LS   D
Sbjct: 347 EWVKHLPICTHSFHVSCIDKWFQSHSNCPLCRCHVLQDHLSTTED 391


>ref|XP_004152751.1| PREDICTED: RING-H2 finger protein ATL54-like [Cucumis sativus]
           gi|449513098|ref|XP_004164230.1| PREDICTED: RING-H2
           finger protein ATL54-like [Cucumis sativus]
          Length = 303

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 40/97 (41%), Positives = 65/97 (67%), Gaps = 1/97 (1%)
 Frame = +2

Query: 59  DAGPMRRLNQ-QADNSVGFDQSQGLDSYIMHSLPITEFKKSMKELPPTSTDCAVCLGEFE 235
           D G    +N+ Q D+ + F  + GL   +++S+ + ++KKS   +    TDC+VCL EF+
Sbjct: 102 DGGEGEFMNENQVDHPIWFITTAGLQQSVINSITVCKYKKSEGLIE--GTDCSVCLSEFQ 159

Query: 236 DGEWLKSLPNCSHVFHVACIDTWFQTHSSCPLCRSYV 346
           + E L+ LP CSH FH+ C+DTW +TH++CPLCR+++
Sbjct: 160 EDEMLRLLPKCSHAFHIGCVDTWLRTHTTCPLCRAHI 196


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