BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00040899
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEM44886.1| RNA polymerase beta chain [Borago officinalis]         262   2e-68
gb|ADD31152.1| RNA polymerase beta'' subunit protein [Ehretia ac...   261   4e-68
gb|AEM44884.1| RNA polymerase beta chain [Hydrophyllum fendleri]      259   1e-67
gb|ADD31150.1| RNA polymerase beta'' subunit protein [Aucuba jap...   251   6e-65
gb|ABV65762.1| RNA polymerase beta'' subunit (chloroplast) [Oxal...   251   6e-65

>gb|AEM44886.1| RNA polymerase beta chain [Borago officinalis]
          Length = 414

 Score =  262 bits (669), Expect = 2e-68
 Identities = 127/142 (89%), Positives = 133/142 (93%)
 Frame = +1

Query: 1   FHLNWYFLNHNNCEKASTITSLGQLI*GNVCIAKKRPRLKSGQVILIQVDSIVIRSAKPF 180
           F+LNWYF++HN CE  STI SLGQLI  NVCIAKKRPRLKSGQVIL+QVDSIVIRSAKPF
Sbjct: 194 FYLNWYFIDHNYCETTSTIMSLGQLICENVCIAKKRPRLKSGQVILVQVDSIVIRSAKPF 253

Query: 181 LATPGATVHGHYGEILYEGQTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEK 360
           LATPGATVHGHYGEILYEG+TL TF YEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEK
Sbjct: 254 LATPGATVHGHYGEILYEGETLATFFYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEK 313

Query: 361 RVEVWNECITRILGIPWGFLIG 426
           R+EVWNECITRILGIPWGFL G
Sbjct: 314 RIEVWNECITRILGIPWGFLXG 335


>gb|ADD31152.1| RNA polymerase beta'' subunit protein [Ehretia acuminata]
          Length = 1381

 Score =  261 bits (667), Expect = 4e-68
 Identities = 128/142 (90%), Positives = 132/142 (92%)
 Frame = +1

Query: 1    FHLNWYFLNHNNCEKASTITSLGQLI*GNVCIAKKRPRLKSGQVILIQVDSIVIRSAKPF 180
            FHLNWYFL+HN CE+  TI SLGQ I  NVCIAK RP LKSGQVIL+QVDSIVIRSAKP+
Sbjct: 1050 FHLNWYFLHHNCCEETFTIISLGQFICENVCIAKNRPHLKSGQVILVQVDSIVIRSAKPY 1109

Query: 181  LATPGATVHGHYGEILYEGQTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEK 360
            LATPGATVHGHYGEILYEG TLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEK
Sbjct: 1110 LATPGATVHGHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEK 1169

Query: 361  RVEVWNECITRILGIPWGFLIG 426
            RVEVWNECITRILGIPWGFLIG
Sbjct: 1170 RVEVWNECITRILGIPWGFLIG 1191


>gb|AEM44884.1| RNA polymerase beta chain [Hydrophyllum fendleri]
          Length = 455

 Score =  259 bits (663), Expect = 1e-67
 Identities = 127/142 (89%), Positives = 132/142 (92%)
 Frame = +1

Query: 1   FHLNWYFLNHNNCEKASTITSLGQLI*GNVCIAKKRPRLKSGQVILIQVDSIVIRSAKPF 180
           FHLNWYFL+HN CE+  TI SLGQ I  NVCIAK RP LKSGQVIL+QVDSIVIRSAKP+
Sbjct: 234 FHLNWYFLHHNCCEETFTIISLGQFICENVCIAKNRPHLKSGQVILVQVDSIVIRSAKPY 293

Query: 181 LATPGATVHGHYGEILYEGQTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEK 360
           LATPGATVHGHYGEILYEG TLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEK
Sbjct: 294 LATPGATVHGHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEK 353

Query: 361 RVEVWNECITRILGIPWGFLIG 426
           RVEVWN+CITRILGIPWGFLIG
Sbjct: 354 RVEVWNKCITRILGIPWGFLIG 375


>gb|ADD31150.1| RNA polymerase beta'' subunit protein [Aucuba japonica]
          Length = 1390

 Score =  251 bits (640), Expect = 6e-65
 Identities = 122/142 (85%), Positives = 130/142 (91%)
 Frame = +1

Query: 1    FHLNWYFLNHNNCEKASTITSLGQLI*GNVCIAKKRPRLKSGQVILIQVDSIVIRSAKPF 180
            F+LNWYFL+HN CE+ STI SLGQ I  NVCIAK  P LKSGQV+++QVDS+VIRSAK +
Sbjct: 1050 FNLNWYFLHHNYCEETSTIISLGQFICENVCIAKNGPHLKSGQVLIVQVDSVVIRSAKSY 1109

Query: 181  LATPGATVHGHYGEILYEGQTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEK 360
            LATPGATVHGHYGEILYEG TLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEK
Sbjct: 1110 LATPGATVHGHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEK 1169

Query: 361  RVEVWNECITRILGIPWGFLIG 426
            RVE WNECITRILGIPWGFLIG
Sbjct: 1170 RVEGWNECITRILGIPWGFLIG 1191


>gb|ABV65762.1| RNA polymerase beta'' subunit (chloroplast) [Oxalis latifolia]
          Length = 1370

 Score =  251 bits (640), Expect = 6e-65
 Identities = 122/142 (85%), Positives = 130/142 (91%)
 Frame = +1

Query: 1    FHLNWYFLNHNNCEKASTITSLGQLI*GNVCIAKKRPRLKSGQVILIQVDSIVIRSAKPF 180
            F+LNWYFL +N CE+ STI SLGQ    N+CIAKK P LKSGQVI++QVDS+VIRSAKP+
Sbjct: 1030 FNLNWYFLYYNYCEERSTIISLGQFFCENLCIAKKEPHLKSGQVIIVQVDSVVIRSAKPY 1089

Query: 181  LATPGATVHGHYGEILYEGQTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEK 360
            LATPGATVHGHYGEILYEG TLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEK
Sbjct: 1090 LATPGATVHGHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEK 1149

Query: 361  RVEVWNECITRILGIPWGFLIG 426
            RVE WNECITRILGIPWGFLIG
Sbjct: 1150 RVEGWNECITRILGIPWGFLIG 1171