BLASTX nr result

ID: Lithospermum22_contig00040894 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00040894
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD99221.1| polypepetide with reverse transcriptase and RNas...    89   3e-16
emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera]    79   5e-13
gb|ABO72547.1| Integrase, catalytic region; Zinc finger, CCHC-ty...    79   5e-13
emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]    78   6e-13
ref|XP_003631962.1| PREDICTED: uncharacterized protein LOC100855...    77   1e-12

>dbj|BAD99221.1| polypepetide with reverse transcriptase and RNaseH domains [Petunia
           x hybrida]
          Length = 389

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 43/91 (47%), Positives = 60/91 (65%)
 Frame = +1

Query: 1   MTRVSAEVTWMVRLLADLGTIEMTPVTLVCDNNSAMHTQIVKNIPLVMKKIAKNPVFHEH 180
           + R+ AE+ W+VRLL DL      PV++ CDN SA+H             IAKNPVFHE 
Sbjct: 280 LRRLVAEIAWIVRLLHDLSVDFSLPVSVHCDNQSAIH-------------IAKNPVFHER 326

Query: 181 TKHIDIDYHFTREKVLEGLLQLAHIPTNEQL 273
           TKHI++D HF REK+L+GL+ L+ +P++ Q+
Sbjct: 327 TKHIELDCHFVREKLLDGLISLSFVPSSSQI 357


>emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera]
          Length = 1288

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 39/91 (42%), Positives = 50/91 (54%)
 Frame = +1

Query: 1    MTRVSAEVTWMVRLLADLGTIEMTPVTLVCDNNSAMHTQIVKNIPLVMKKIAKNPVFHEH 180
            M   S E+TW++ LL D G     P  L CDN SA+H             +A+NPVFHE 
Sbjct: 1182 MANTSCEITWLLALLKDFGIDHSAPALLFCDNQSALH-------------MAENPVFHER 1228

Query: 181  TKHIDIDYHFTREKVLEGLLQLAHIPTNEQL 273
            TKHI+ID H  R+KV  G+L+   + T  QL
Sbjct: 1229 TKHIEIDCHLVRDKVQSGVLKPMFVSTEHQL 1259


>gb|ABO72547.1| Integrase, catalytic region; Zinc finger, CCHC-type;
           Retrotransposon gag protein, putative [Medicago
           truncatula]
          Length = 120

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 37/91 (40%), Positives = 57/91 (62%)
 Frame = +1

Query: 1   MTRVSAEVTWMVRLLADLGTIEMTPVTLVCDNNSAMHTQIVKNIPLVMKKIAKNPVFHEH 180
           +  +S+E+ W+  LL+DLG     P+T+ CD+ +A+H             IA+NPVFHE 
Sbjct: 29  LATLSSELQWLKYLLSDLGIYHPQPITIYCDSQAAIH-------------IAENPVFHER 75

Query: 181 TKHIDIDYHFTREKVLEGLLQLAHIPTNEQL 273
           TKHI+ID HF REK+   L+  ++I +++QL
Sbjct: 76  TKHIEIDCHFVREKIKSSLITASYIRSSDQL 106


>emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]
          Length = 1316

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 39/90 (43%), Positives = 52/90 (57%)
 Frame = +1

Query: 1    MTRVSAEVTWMVRLLADLGTIEMTPVTLVCDNNSAMHTQIVKNIPLVMKKIAKNPVFHEH 180
            M   ++E+TW+  LLA LG +   P+ L CDN +A+H             IA NPVFHE 
Sbjct: 1210 MAMAASELTWLKSLLASLGVLHDKPMKLYCDNKAALH-------------IAANPVFHER 1256

Query: 181  TKHIDIDYHFTREKVLEGLLQLAHIPTNEQ 270
            TKHI+ID HF REKV  G +   ++P+  Q
Sbjct: 1257 TKHIEIDCHFVREKVQSGEIVTTYLPSKLQ 1286


>ref|XP_003631962.1| PREDICTED: uncharacterized protein LOC100855226 [Vitis vinifera]
          Length = 1011

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 41/90 (45%), Positives = 49/90 (54%)
 Frame = +1

Query: 1    MTRVSAEVTWMVRLLADLGTIEMTPVTLVCDNNSAMHTQIVKNIPLVMKKIAKNPVFHEH 180
            M     E+TW+  LLADL       V L CDN +A+H             IA NPVFHE 
Sbjct: 899  MATTCCEITWLRSLLADLNVNHAHAVKLFCDNQAAIH-------------IASNPVFHER 945

Query: 181  TKHIDIDYHFTREKVLEGLLQLAHIPTNEQ 270
            TKHI++D H  REKV  GL++  HI T EQ
Sbjct: 946  TKHIEMDCHVVREKVQRGLVKTMHIRTQEQ 975


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