BLASTX nr result

ID: Lithospermum22_contig00040887 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00040887
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]   275   2e-72
ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat...   273   1e-71
ref|XP_002513610.1| pentatricopeptide repeat-containing protein,...   267   8e-70
ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat...   265   3e-69
ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat...   263   1e-68

>emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
          Length = 1740

 Score =  275 bits (704), Expect = 2e-72
 Identities = 130/163 (79%), Positives = 150/163 (92%)
 Frame = +2

Query: 2    LSACRVYNNMDIGLVAADNLCQLAPKQSGYYVLISNIFAKAGRWKDVTTIRLLMKDRGVK 181
            LSACRVY+NM IGL+AAD L QL P+QSGYYVL+SNI+AKAGRW+DVTT+R +MK +G+K
Sbjct: 1471 LSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIK 1530

Query: 182  KIPGISNVELNNQVHTFLAGDRLHPQSDKIYEELEVLVGKMKDAGYVPETDGALHDVEEE 361
            K+PG+SN EL+N+VHTFLAGD+ HPQS +IYEEL+VLVGKMK+AGYVPETD ALHDVEEE
Sbjct: 1531 KMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVLVGKMKEAGYVPETDSALHDVEEE 1590

Query: 362  DKETHLAVHSEKLAIVFAIINTEPGTPIRITKNLRVCGDCHIA 490
            DKE HLAVHSEKLAI FAI+NT PG+PIRITKNLRVCGDCHIA
Sbjct: 1591 DKECHLAVHSEKLAIAFAILNTAPGSPIRITKNLRVCGDCHIA 1633


>ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Vitis vinifera]
          Length = 678

 Score =  273 bits (698), Expect = 1e-71
 Identities = 129/163 (79%), Positives = 149/163 (91%)
 Frame = +2

Query: 2   LSACRVYNNMDIGLVAADNLCQLAPKQSGYYVLISNIFAKAGRWKDVTTIRLLMKDRGVK 181
           LSACRVY+NM IGL+AAD L QL P+QSGYYVL+SNI+AKAGRW+DVTT+R +MK +G+K
Sbjct: 482 LSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIK 541

Query: 182 KIPGISNVELNNQVHTFLAGDRLHPQSDKIYEELEVLVGKMKDAGYVPETDGALHDVEEE 361
           K+PG+SN EL+N+VHTFLAGD+ HPQS +IYEEL+V VGKMK+AGYVPETD ALHDVEEE
Sbjct: 542 KMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVSVGKMKEAGYVPETDSALHDVEEE 601

Query: 362 DKETHLAVHSEKLAIVFAIINTEPGTPIRITKNLRVCGDCHIA 490
           DKE HLAVHSEKLAI FAI+NT PG+PIRITKNLRVCGDCHIA
Sbjct: 602 DKECHLAVHSEKLAIAFAILNTAPGSPIRITKNLRVCGDCHIA 644


>ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547518|gb|EEF49013.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 660

 Score =  267 bits (682), Expect = 8e-70
 Identities = 125/163 (76%), Positives = 145/163 (88%)
 Frame = +2

Query: 2   LSACRVYNNMDIGLVAADNLCQLAPKQSGYYVLISNIFAKAGRWKDVTTIRLLMKDRGVK 181
           LSACRVY+NM+IG++AAD L  L P+ SGYYVL+SNI+AKAGRW DV  IR +M+ +G+K
Sbjct: 464 LSACRVYSNMNIGILAADKLLMLNPEHSGYYVLLSNIYAKAGRWADVAAIRSIMERKGIK 523

Query: 182 KIPGISNVELNNQVHTFLAGDRLHPQSDKIYEELEVLVGKMKDAGYVPETDGALHDVEEE 361
           K+PGISNVELN+ VHTFLAGD  HPQS KIYEEL+VLVGKMK+ GY+PETD ALHDVEEE
Sbjct: 524 KLPGISNVELNDGVHTFLAGDHSHPQSKKIYEELDVLVGKMKELGYMPETDSALHDVEEE 583

Query: 362 DKETHLAVHSEKLAIVFAIINTEPGTPIRITKNLRVCGDCHIA 490
           DKE HLAVHSEKLA+ FAIINT+PGTPIR+TKNLRVCGDCH+A
Sbjct: 584 DKEYHLAVHSEKLAVAFAIINTKPGTPIRVTKNLRVCGDCHVA 626


>ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Glycine max]
          Length = 673

 Score =  265 bits (677), Expect = 3e-69
 Identities = 129/163 (79%), Positives = 147/163 (90%)
 Frame = +2

Query: 2   LSACRVYNNMDIGLVAADNLCQLAPKQSGYYVLISNIFAKAGRWKDVTTIRLLMKDRGVK 181
           LS+CRVY+NMDIG++AAD L QLAP++SGYYVL+SNI+AKAGRW +VT IR LMK R ++
Sbjct: 478 LSSCRVYSNMDIGILAADKLLQLAPEESGYYVLLSNIYAKAGRWTEVTAIRSLMKRRRIR 537

Query: 182 KIPGISNVELNNQVHTFLAGDRLHPQSDKIYEELEVLVGKMKDAGYVPETDGALHDVEEE 361
           K+PGISNVELNNQVHTFLAGD  HPQS +IYEEL VLVGKMK+ GYVP+TD ALHDVEEE
Sbjct: 538 KMPGISNVELNNQVHTFLAGDTYHPQSKEIYEELSVLVGKMKELGYVPKTDSALHDVEEE 597

Query: 362 DKETHLAVHSEKLAIVFAIINTEPGTPIRITKNLRVCGDCHIA 490
           DKE HLAVHSEKLAIVFAI+NT+  +PIRITKNLRVCGDCHIA
Sbjct: 598 DKECHLAVHSEKLAIVFAILNTQE-SPIRITKNLRVCGDCHIA 639


>ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Cucumis sativus]
          Length = 678

 Score =  263 bits (672), Expect = 1e-68
 Identities = 126/163 (77%), Positives = 143/163 (87%)
 Frame = +2

Query: 2   LSACRVYNNMDIGLVAADNLCQLAPKQSGYYVLISNIFAKAGRWKDVTTIRLLMKDRGVK 181
           LSACRV++ MDIGLVAAD L QLAPKQSGYYVL+SNI+AKAG WKDV  +R  MK  G+K
Sbjct: 482 LSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIK 541

Query: 182 KIPGISNVELNNQVHTFLAGDRLHPQSDKIYEELEVLVGKMKDAGYVPETDGALHDVEEE 361
           K+PGISNVELN QVHTFLAGD+ HPQ+  IY EL+VLVGKMK+ GY+P+T+ ALHDVE E
Sbjct: 542 KVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKELGYIPQTESALHDVEVE 601

Query: 362 DKETHLAVHSEKLAIVFAIINTEPGTPIRITKNLRVCGDCHIA 490
           DKE HLA+HSEKLAIVFAI+NT+ GTPIRITKNLRVCGDCHIA
Sbjct: 602 DKECHLAIHSEKLAIVFAILNTKQGTPIRITKNLRVCGDCHIA 644


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