BLASTX nr result

ID: Lithospermum22_contig00040873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00040873
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265712.1| PREDICTED: thioredoxin-like protein 4B isofo...    86   2e-22
ref|XP_002298799.1| predicted protein [Populus trichocarpa] gi|1...    91   5e-22
ref|XP_004139665.1| PREDICTED: thioredoxin-like protein 4B-like ...    80   3e-21
ref|NP_189117.2| mRNA splicing factor, thioredoxin-like U5 snRNP...    80   6e-21
ref|XP_002521122.1| Spliceosomal protein DIB1, putative [Ricinus...    85   6e-21

>ref|XP_002265712.1| PREDICTED: thioredoxin-like protein 4B isoform 1 [Vitis vinifera]
           gi|359480353|ref|XP_003632435.1| PREDICTED:
           thioredoxin-like protein 4B isoform 2 [Vitis vinifera]
           gi|297744299|emb|CBI37269.3| unnamed protein product
           [Vitis vinifera]
          Length = 151

 Score = 86.3 bits (212), Expect(2) = 2e-22
 Identities = 41/57 (71%), Positives = 48/57 (84%)
 Frame = -1

Query: 174 SFDPSCLQLDDMLYKSAKDVSKFATIATVDIDSLDVQVYVNYFDISYIPSTIFFFNA 4
           S D  CL LDD+L KSA++VSKFAT+A VDIDS D+QVYV YFDI+ IPST+FFFNA
Sbjct: 33  STDSVCLHLDDILSKSAREVSKFATVALVDIDSEDIQVYVKYFDITLIPSTVFFFNA 89



 Score = 44.3 bits (103), Expect(2) = 2e-22
 Identities = 21/29 (72%), Positives = 26/29 (89%)
 Frame = -3

Query: 253 MEYLVLTLTKKEEVDSIIRDTIDKVLVVR 167
           M +L+ TL +K+EVDSIIRDTIDKVLV+R
Sbjct: 1   MSFLMTTLREKKEVDSIIRDTIDKVLVLR 29


>ref|XP_002298799.1| predicted protein [Populus trichocarpa] gi|118481671|gb|ABK92776.1|
           unknown [Populus trichocarpa]
           gi|222846057|gb|EEE83604.1| predicted protein [Populus
           trichocarpa]
          Length = 153

 Score = 91.3 bits (225), Expect(2) = 5e-22
 Identities = 43/55 (78%), Positives = 49/55 (89%)
 Frame = -1

Query: 168 DPSCLQLDDMLYKSAKDVSKFATIATVDIDSLDVQVYVNYFDISYIPSTIFFFNA 4
           DP CL LDD+L KSA++VSKFATIA VDIDS DVQVYVNYFDI+ +PST+FFFNA
Sbjct: 37  DPVCLHLDDILSKSAREVSKFATIALVDIDSEDVQVYVNYFDITLVPSTVFFFNA 91



 Score = 38.1 bits (87), Expect(2) = 5e-22
 Identities = 19/29 (65%), Positives = 24/29 (82%), Gaps = 1/29 (3%)
 Frame = -3

Query: 250 EYLVLTL-TKKEEVDSIIRDTIDKVLVVR 167
           +YL  TL TKK+E+D +IRD IDKVLV+R
Sbjct: 3   DYLSTTLLTKKKEIDCVIRDAIDKVLVLR 31


>ref|XP_004139665.1| PREDICTED: thioredoxin-like protein 4B-like isoform 1 [Cucumis
           sativus] gi|449443802|ref|XP_004139666.1| PREDICTED:
           thioredoxin-like protein 4B-like isoform 2 [Cucumis
           sativus] gi|449475408|ref|XP_004154445.1| PREDICTED:
           thioredoxin-like protein 4B-like isoform 1 [Cucumis
           sativus] gi|449475410|ref|XP_004154446.1| PREDICTED:
           thioredoxin-like protein 4B-like isoform 2 [Cucumis
           sativus]
          Length = 151

 Score = 79.7 bits (195), Expect(2) = 3e-21
 Identities = 37/55 (67%), Positives = 46/55 (83%)
 Frame = -1

Query: 168 DPSCLQLDDMLYKSAKDVSKFATIATVDIDSLDVQVYVNYFDISYIPSTIFFFNA 4
           D  CL LDD+L K A++VSKFA++A VDIDS ++QVYV YFDI+ IPST+FFFNA
Sbjct: 35  DSVCLLLDDILAKCAREVSKFASVALVDIDSEEIQVYVKYFDITLIPSTVFFFNA 89



 Score = 47.0 bits (110), Expect(2) = 3e-21
 Identities = 22/29 (75%), Positives = 26/29 (89%)
 Frame = -3

Query: 253 MEYLVLTLTKKEEVDSIIRDTIDKVLVVR 167
           M YL+ TLTKK EVDS+IRDTIDKVL++R
Sbjct: 1   MSYLLRTLTKKGEVDSLIRDTIDKVLILR 29


>ref|NP_189117.2| mRNA splicing factor, thioredoxin-like U5 snRNP [Arabidopsis
           thaliana] gi|44917529|gb|AAS49089.1| At3g24730
           [Arabidopsis thaliana] gi|332643419|gb|AEE76940.1| mRNA
           splicing factor, thioredoxin-like U5 snRNP [Arabidopsis
           thaliana]
          Length = 159

 Score = 80.5 bits (197), Expect(2) = 6e-21
 Identities = 39/57 (68%), Positives = 45/57 (78%)
 Frame = -1

Query: 174 SFDPSCLQLDDMLYKSAKDVSKFATIATVDIDSLDVQVYVNYFDISYIPSTIFFFNA 4
           S D  CLQ D++L KS +DVSKFA +A VD+DS DVQVYV YFDI+  PSTIFFFNA
Sbjct: 41  SSDAVCLQHDEILAKSVRDVSKFAKVALVDVDSEDVQVYVKYFDITLFPSTIFFFNA 97



 Score = 45.1 bits (105), Expect(2) = 6e-21
 Identities = 20/30 (66%), Positives = 26/30 (86%)
 Frame = -3

Query: 256 DMEYLVLTLTKKEEVDSIIRDTIDKVLVVR 167
           +M YL+ TLT KEE+D +IRDTID+VLV+R
Sbjct: 8   EMSYLLKTLTTKEEIDRVIRDTIDEVLVLR 37


>ref|XP_002521122.1| Spliceosomal protein DIB1, putative [Ricinus communis]
           gi|223539691|gb|EEF41273.1| Spliceosomal protein DIB1,
           putative [Ricinus communis]
          Length = 131

 Score = 85.1 bits (209), Expect(2) = 6e-21
 Identities = 41/57 (71%), Positives = 48/57 (84%)
 Frame = -1

Query: 174 SFDPSCLQLDDMLYKSAKDVSKFATIATVDIDSLDVQVYVNYFDISYIPSTIFFFNA 4
           S D  CL LDD+L KSA++VSKFA+IA VD+DS DVQVYVNYFDI+  PST+FFFNA
Sbjct: 33  SSDAVCLHLDDLLSKSAREVSKFASIALVDMDSEDVQVYVNYFDITLTPSTVFFFNA 89



 Score = 40.4 bits (93), Expect(2) = 6e-21
 Identities = 18/22 (81%), Positives = 22/22 (100%)
 Frame = -3

Query: 232 LTKKEEVDSIIRDTIDKVLVVR 167
           LTKK+E+DS+IRDTIDKVLV+R
Sbjct: 8   LTKKKEIDSLIRDTIDKVLVLR 29


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