BLASTX nr result

ID: Lithospermum22_contig00040862 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00040862
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525222.1| ATP-binding cassette transporter, putative [...   116   2e-24
ref|XP_003520635.1| PREDICTED: ABC transporter G family member 2...   114   1e-23
ref|XP_002320112.1| white-brown-complex ABC transporter family [...   112   2e-23
ref|XP_003625526.1| ABC transporter G family member [Medicago tr...   112   4e-23
ref|XP_002877923.1| abc transporter family protein [Arabidopsis ...   111   5e-23

>ref|XP_002525222.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223535519|gb|EEF37188.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 743

 Score =  116 bits (291), Expect = 2e-24
 Identities = 67/99 (67%), Positives = 78/99 (78%)
 Frame = -2

Query: 297 DLSYSVNVQRIFSCFGGGNKNHDILGHSGRNEEHTKVLLNDISGQAREGEILAVLGASGS 118
           +LSYSV V +  S    GN + D       +E   K+LLNDISG+AREGEI+AVLGASGS
Sbjct: 95  NLSYSVKVAQKMSFPFSGNDSFD------SSENGIKLLLNDISGEAREGEIMAVLGASGS 148

Query: 117 GKSTLIDALADRISRESLLGTVTLNGEVLESKLLKVISA 1
           GKSTLIDALADRI++ESL G+VTLNGEVLES+LLKVISA
Sbjct: 149 GKSTLIDALADRIAKESLKGSVTLNGEVLESRLLKVISA 187


>ref|XP_003520635.1| PREDICTED: ABC transporter G family member 2-like [Glycine max]
          Length = 734

 Score =  114 bits (284), Expect = 1e-23
 Identities = 65/102 (63%), Positives = 79/102 (77%), Gaps = 3/102 (2%)
 Frame = -2

Query: 297 DLSYSVNVQRIFSCFGG---GNKNHDILGHSGRNEEHTKVLLNDISGQAREGEILAVLGA 127
           +L+YSVN++R F+ F        +H+   +       TK LLNDISG+A++GEI+AVLGA
Sbjct: 81  NLTYSVNLRRKFTFFPATTISTPDHETKPNG------TKTLLNDISGEAKDGEIMAVLGA 134

Query: 126 SGSGKSTLIDALADRISRESLLGTVTLNGEVLESKLLKVISA 1
           SGSGKSTLIDALADRIS+ESL GTVTLNG+VLES LLKVISA
Sbjct: 135 SGSGKSTLIDALADRISKESLKGTVTLNGDVLESSLLKVISA 176


>ref|XP_002320112.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222860885|gb|EEE98427.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 738

 Score =  112 bits (281), Expect = 2e-23
 Identities = 65/99 (65%), Positives = 76/99 (76%)
 Frame = -2

Query: 297 DLSYSVNVQRIFSCFGGGNKNHDILGHSGRNEEHTKVLLNDISGQAREGEILAVLGASGS 118
           +L+YSV V +       G ++   L H        KVLLNDISG+AREGEI+AVLGASGS
Sbjct: 87  NLTYSVKVGQNMPFPVCGKED---LSHGSSETASMKVLLNDISGEAREGEIMAVLGASGS 143

Query: 117 GKSTLIDALADRISRESLLGTVTLNGEVLESKLLKVISA 1
           GKSTLIDALADRI++ESL G+VTLNGEVLES+LLKVISA
Sbjct: 144 GKSTLIDALADRIAKESLKGSVTLNGEVLESRLLKVISA 182


>ref|XP_003625526.1| ABC transporter G family member [Medicago truncatula]
           gi|355500541|gb|AES81744.1| ABC transporter G family
           member [Medicago truncatula]
          Length = 750

 Score =  112 bits (279), Expect = 4e-23
 Identities = 64/105 (60%), Positives = 79/105 (75%), Gaps = 6/105 (5%)
 Frame = -2

Query: 297 DLSYSVNVQRIFSCFGGG------NKNHDILGHSGRNEEHTKVLLNDISGQAREGEILAV 136
           +L+YSV + +  +CF         ++  +I   +G     TK+LLNDISG+AR+GEI+AV
Sbjct: 89  NLTYSVKLNKKMTCFSSKKSALPTDEEPEITKPNG-----TKILLNDISGEARDGEIMAV 143

Query: 135 LGASGSGKSTLIDALADRISRESLLGTVTLNGEVLESKLLKVISA 1
           LGASGSGKSTLIDALADRIS+ESL GTVTLNG+VLES L KVISA
Sbjct: 144 LGASGSGKSTLIDALADRISKESLKGTVTLNGDVLESSLQKVISA 188


>ref|XP_002877923.1| abc transporter family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297323761|gb|EFH54182.1| abc transporter family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 737

 Score =  111 bits (278), Expect = 5e-23
 Identities = 66/102 (64%), Positives = 78/102 (76%), Gaps = 2/102 (1%)
 Frame = -2

Query: 300 QDLSYSVNVQRIFSCFGGGNKNHDILGHSGRN--EEHTKVLLNDISGQAREGEILAVLGA 127
           +DL+YSV +Q+ F  F          G+S  N  E +TKVLLN ISG+AREGE++AVLGA
Sbjct: 91  KDLTYSVKIQKKFKPF-------PCCGNSPFNGMEMNTKVLLNGISGEAREGEMMAVLGA 143

Query: 126 SGSGKSTLIDALADRISRESLLGTVTLNGEVLESKLLKVISA 1
           SGSGKSTLIDALA+RIS+ESL G +TLNGEVLES L KVISA
Sbjct: 144 SGSGKSTLIDALANRISKESLRGDITLNGEVLESSLHKVISA 185


Top