BLASTX nr result
ID: Lithospermum22_contig00040810
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00040810
(506 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [V... 216 7e-57
ref|XP_002514998.1| alpha DNA polymerase, putative [Ricinus comm... 211 2e-55
ref|XP_004137446.1| PREDICTED: DNA polymerase alpha subunit B-li... 200 5e-52
gb|AEL99203.1| DNA polymerase alpha subunit B family protein, pa... 196 3e-51
gb|AEL99204.1| DNA polymerase alpha subunit B family protein, pa... 193 3e-50
>ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [Vitis vinifera]
gi|297738371|emb|CBI27572.3| unnamed protein product
[Vitis vinifera]
Length = 623
Score = 216 bits (550), Expect(2) = 7e-57
Identities = 108/154 (70%), Positives = 125/154 (81%), Gaps = 1/154 (0%)
Frame = -1
Query: 506 DKFNFLENRIMKHAKALAASGLNEEPMDPTVASQKTVFAVGMICCEEEGRLKEKPIMLQS 327
D+FN LENRI KH AL A+GL +EP DPTVASQK+VFA GMICC+ EGRL EK I+LQS
Sbjct: 216 DRFNSLENRIKKHTTALVATGLYKEPTDPTVASQKSVFATGMICCDGEGRLNEKSILLQS 275
Query: 326 SVEHSGGQRVRLDLQKVEQFSLFPGQVVGIEGHNPSGHCLIASKIIDHIPLTVSTDGNTR 147
SV+HSGGQRVRLDL K+ QFS+FPGQVVGIEGHNPSGHCLIASKI+D IP++ TD +
Sbjct: 276 SVQHSGGQRVRLDLSKLNQFSIFPGQVVGIEGHNPSGHCLIASKILDSIPVSAPTDVDLH 335
Query: 146 PTKKQA-TQELQSADLPPATPEISLIVAAGPYTT 48
P KKQA +E QSAD E+SL+VAAGP+TT
Sbjct: 336 PAKKQARDEEFQSADSSHKLAELSLMVAAGPFTT 369
Score = 29.6 bits (65), Expect(2) = 7e-57
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -2
Query: 43 NLFFEPLTELLAYA 2
NL FEPLTELLAYA
Sbjct: 372 NLLFEPLTELLAYA 385
>ref|XP_002514998.1| alpha DNA polymerase, putative [Ricinus communis]
gi|223546049|gb|EEF47552.1| alpha DNA polymerase,
putative [Ricinus communis]
Length = 621
Score = 211 bits (537), Expect(2) = 2e-55
Identities = 102/155 (65%), Positives = 125/155 (80%), Gaps = 1/155 (0%)
Frame = -1
Query: 506 DKFNFLENRIMKHAKALAASGLNEEPMDPTVASQKTVFAVGMICCEEEGRLKEKPIMLQS 327
D+FN L+NRI KHA AL ASGL EEP DPTVASQ+ VFAVGMICC+ EGRL EK ++LQS
Sbjct: 215 DRFNALDNRIRKHAAALVASGLYEEPTDPTVASQRNVFAVGMICCDGEGRLNEKSVLLQS 274
Query: 326 SVEHSGGQRVRLDLQKVEQFSLFPGQVVGIEGHNPSGHCLIASKIIDHIPLTVSTDGNTR 147
S+EHSGGQRV LDL + QFS+FPGQ+V IEGHNPSGHCL+ASK++D IPL+ + DGN
Sbjct: 275 SIEHSGGQRVHLDLHNLSQFSIFPGQIVAIEGHNPSGHCLVASKLVDSIPLSAAPDGNLP 334
Query: 146 PTKKQA-TQELQSADLPPATPEISLIVAAGPYTTI 45
P KKQA QE++S T EIS+++A+GP+TT+
Sbjct: 335 PAKKQALDQEIESIG-SSCTQEISVLIASGPFTTL 368
Score = 29.6 bits (65), Expect(2) = 2e-55
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -2
Query: 43 NLFFEPLTELLAYA 2
NL FEPLTELLAYA
Sbjct: 370 NLMFEPLTELLAYA 383
>ref|XP_004137446.1| PREDICTED: DNA polymerase alpha subunit B-like [Cucumis sativus]
gi|449486914|ref|XP_004157440.1| PREDICTED: DNA
polymerase alpha subunit B-like [Cucumis sativus]
Length = 622
Score = 200 bits (508), Expect(2) = 5e-52
Identities = 98/154 (63%), Positives = 122/154 (79%), Gaps = 1/154 (0%)
Frame = -1
Query: 506 DKFNFLENRIMKHAKALAASGLNEEPMDPTVASQKTVFAVGMICCEEEGRLKEKPIMLQS 327
D+FN L+NRIM+HAKALAASGL EE +DPTVASQK++FAVGMI C+ EG L +K I+LQS
Sbjct: 216 DRFNALDNRIMRHAKALAASGLYEEAVDPTVASQKSIFAVGMIYCDGEGHLNDKSILLQS 275
Query: 326 SVEHSGGQRVRLDLQKVEQFSLFPGQVVGIEGHNPSGHCLIASKIIDHIPLTVSTDGNTR 147
S+ HSGGQRVRL+LQ + QFS+FPGQVVGIEGHNPSGHCLIASK++D PL+ + D
Sbjct: 276 SIAHSGGQRVRLELQNLSQFSIFPGQVVGIEGHNPSGHCLIASKLVDSFPLSATIDPILP 335
Query: 146 PTKKQA-TQELQSADLPPATPEISLIVAAGPYTT 48
P KK A ++Q + E+S+I+A+GPYTT
Sbjct: 336 PAKKIALNHDIQPINQSSTPSELSMIIASGPYTT 369
Score = 29.6 bits (65), Expect(2) = 5e-52
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -2
Query: 43 NLFFEPLTELLAYA 2
NL FEPLTELLAYA
Sbjct: 372 NLLFEPLTELLAYA 385
>gb|AEL99203.1| DNA polymerase alpha subunit B family protein, partial [Silene
latifolia]
Length = 315
Score = 196 bits (499), Expect(2) = 3e-51
Identities = 96/154 (62%), Positives = 119/154 (77%), Gaps = 1/154 (0%)
Frame = -1
Query: 506 DKFNFLENRIMKHAKALAASGLNEEPMDPTVASQKTVFAVGMICCEEEGRLKEKPIMLQS 327
DKFNFLE RI+KHA A G E P+DPTVASQK++FAVGMICC+ EGRL EK ++LQS
Sbjct: 123 DKFNFLETRIVKHASAFVDCGQYEGPVDPTVASQKSIFAVGMICCDGEGRLNEKSVLLQS 182
Query: 326 SVEHSGGQRVRLDLQKVEQFSLFPGQVVGIEGHNPSGHCLIASKIIDHIPLTVSTDGNTR 147
SVEHSGGQRVRL+L+K+ Q+++FPGQV+GI G NPSGHCL+ASK+ D IP S+D +
Sbjct: 183 SVEHSGGQRVRLELEKLSQYTIFPGQVIGIVGDNPSGHCLVASKVDDLIPFPASSDCDLH 242
Query: 146 PTKKQATQELQSADL-PPATPEISLIVAAGPYTT 48
P K+QA E L PA E+S+I+AAGP+TT
Sbjct: 243 PVKRQAVDEDGLPSLQSPAPSELSVIIAAGPFTT 276
Score = 30.4 bits (67), Expect(2) = 3e-51
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = -2
Query: 43 NLFFEPLTELLAYA 2
NLFFEPL+ELLAYA
Sbjct: 279 NLFFEPLSELLAYA 292
>gb|AEL99204.1| DNA polymerase alpha subunit B family protein, partial [Silene
latifolia]
Length = 315
Score = 193 bits (490), Expect(2) = 3e-50
Identities = 95/154 (61%), Positives = 118/154 (76%), Gaps = 1/154 (0%)
Frame = -1
Query: 506 DKFNFLENRIMKHAKALAASGLNEEPMDPTVASQKTVFAVGMICCEEEGRLKEKPIMLQS 327
DKFNFLE I+KHA A G E P+DPTVASQK++FAVGMICC+ EGRL EK ++LQS
Sbjct: 123 DKFNFLETCIVKHASAFVDCGQYEGPVDPTVASQKSIFAVGMICCDGEGRLNEKSVLLQS 182
Query: 326 SVEHSGGQRVRLDLQKVEQFSLFPGQVVGIEGHNPSGHCLIASKIIDHIPLTVSTDGNTR 147
SVEHSGGQRVRL+L+K+ Q+++FPGQV+GI G NPSGHCL+ASK+ D IP S+D +
Sbjct: 183 SVEHSGGQRVRLELEKLSQYTIFPGQVIGIVGDNPSGHCLVASKVEDLIPFPASSDCDLH 242
Query: 146 PTKKQATQELQSADL-PPATPEISLIVAAGPYTT 48
P K+QA E L PA E+S+I+AAGP+TT
Sbjct: 243 PVKRQALDEDGLPSLQSPALSELSVIIAAGPFTT 276
Score = 30.4 bits (67), Expect(2) = 3e-50
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = -2
Query: 43 NLFFEPLTELLAYA 2
NLFFEPL+ELLAYA
Sbjct: 279 NLFFEPLSELLAYA 292