BLASTX nr result

ID: Lithospermum22_contig00040734 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00040734
         (680 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264392.1| PREDICTED: protein CHUP1, chloroplastic [Vit...    66   7e-09
emb|CAN72920.1| hypothetical protein VITISV_022322 [Vitis vinifera]    66   7e-09
ref|XP_003553573.1| PREDICTED: protein CHUP1, chloroplastic-like...    63   6e-08
ref|XP_002307197.1| predicted protein [Populus trichocarpa] gi|2...    57   4e-06

>ref|XP_002264392.1| PREDICTED: protein CHUP1, chloroplastic [Vitis vinifera]
           gi|297740023|emb|CBI30205.3| unnamed protein product
           [Vitis vinifera]
          Length = 440

 Score = 65.9 bits (159), Expect = 7e-09
 Identities = 43/146 (29%), Positives = 72/146 (49%), Gaps = 2/146 (1%)
 Frame = +3

Query: 3   KLQSEKKELLDKMDEMVMTDISASSKIGGEMVSIEEYNKVVHELEENEKDRAEEAKELIF 182
           ++Q EK +L DK+ ++      ++SK   E ++ E+YN++V+ELE   KDRA E KEL++
Sbjct: 243 QVQEEKHQLSDKL-KLAEKSAPSTSKSEAEGIAKEDYNQLVNELERLHKDRAAEVKELVY 301

Query: 183 LRGCHALLMRK--NXXXXXXXXXXXXXXXPHYTGSEELPGFGSDNELQITSWGHRDDSCL 356
           LR  +A L  +                    +    E     S++EL+ T      + CL
Sbjct: 302 LRWSNACLRHELMRNQKQPEQNQESCQSELDFEPKGETGEHASEHELEGTVLEPPSEPCL 361

Query: 357 GFSAXXXXXXXXXXLIEKFKKWVDGS 434
           G S+          +++K ++WVDGS
Sbjct: 362 GVSSGSHISSKRPKILQKLRRWVDGS 387


>emb|CAN72920.1| hypothetical protein VITISV_022322 [Vitis vinifera]
          Length = 1303

 Score = 65.9 bits (159), Expect = 7e-09
 Identities = 43/146 (29%), Positives = 72/146 (49%), Gaps = 2/146 (1%)
 Frame = +3

Query: 3   KLQSEKKELLDKMDEMVMTDISASSKIGGEMVSIEEYNKVVHELEENEKDRAEEAKELIF 182
           ++Q EK +L DK+ ++      ++SK   E ++ E+YN++V+ELE   KDRA E KEL++
Sbjct: 243 QVQEEKHQLSDKL-KLAEKSAPSTSKSEAEGIAKEDYNQLVNELERLHKDRAAEVKELVY 301

Query: 183 LRGCHALLMRK--NXXXXXXXXXXXXXXXPHYTGSEELPGFGSDNELQITSWGHRDDSCL 356
           LR  +A L  +                    +    E     S++EL+ T      + CL
Sbjct: 302 LRWSNACLRHELMRNQKQPEQNQESCQSELDFEPKGETGEHASEHELEGTVLEPPSEPCL 361

Query: 357 GFSAXXXXXXXXXXLIEKFKKWVDGS 434
           G S+          +++K ++WVDGS
Sbjct: 362 GVSSGSHISSKRPKILQKLRRWVDGS 387


>ref|XP_003553573.1| PREDICTED: protein CHUP1, chloroplastic-like [Glycine max]
          Length = 445

 Score = 62.8 bits (151), Expect = 6e-08
 Identities = 60/200 (30%), Positives = 85/200 (42%), Gaps = 17/200 (8%)
 Frame = +3

Query: 3   KLQSEKKELLDKMDEMV------MTDISASSKIGGEM-----VSIEEYNKVVHELEENEK 149
           +LQ EK ELL K+D         +T  S   K+  E      VS EEY K++ ELE+ +K
Sbjct: 258 QLQDEKNELLKKLDTAEKSYASKVTSKSLQFKVFHEQIEAGDVSREEYTKLLDELEQAKK 317

Query: 150 DRAEEAKELIFLRGCHALLMRKNXXXXXXXXXXXXXXXP-HYTGSEELPGFGSDNELQIT 326
           +RA+EAKELI+LR  +A L                      +  ++ L  + S++EL  +
Sbjct: 318 ERADEAKELIYLRWTNACLRHDLVRHHEQQQNQDKNHLELEFGRNDVLIHYDSEHELHNS 377

Query: 327 SWGHR-----DDSCLGFSAXXXXXXXXXXLIEKFKKWVDGSXXXXXXXXXXXXXXXXXXX 491
              H      D+   G             L+E+ K+WVDGS                   
Sbjct: 378 LLEHHSDPSFDEHTRGHDHSDSACSKRTKLLERLKRWVDGS-----------EKARVRHS 426

Query: 492 XXSGAHSNLIIPARNSCSSA 551
              GA  +L +P R SCSSA
Sbjct: 427 VSKGAEEHL-VPRRKSCSSA 445


>ref|XP_002307197.1| predicted protein [Populus trichocarpa] gi|222856646|gb|EEE94193.1|
           predicted protein [Populus trichocarpa]
          Length = 356

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 31/68 (45%), Positives = 45/68 (66%)
 Frame = +3

Query: 3   KLQSEKKELLDKMDEMVMTDISASSKIGGEMVSIEEYNKVVHELEENEKDRAEEAKELIF 182
           +LQ EK ++L K+D    +  S  SKI  E + +E+YN++V+ELE+  KDRA E  ELI+
Sbjct: 263 RLQEEKNDVLVKLDA-AESQASLISKIEAEGIGMEDYNRLVNELEQLHKDRAAETTELIY 321

Query: 183 LRGCHALL 206
           LR  +A L
Sbjct: 322 LRWSNACL 329


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