BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00040717
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276540.1| PREDICTED: pentatricopeptide repeat-containi...   128   6e-28
ref|XP_002306340.1| predicted protein [Populus trichocarpa] gi|2...   122   3e-26
ref|XP_003630096.1| Pentatricopeptide repeat-containing protein ...   118   4e-25
ref|XP_004169853.1| PREDICTED: pentatricopeptide repeat-containi...   115   4e-24
ref|XP_004143565.1| PREDICTED: pentatricopeptide repeat-containi...   115   4e-24

>ref|XP_002276540.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic [Vitis vinifera]
           gi|296082481|emb|CBI21486.3| unnamed protein product
           [Vitis vinifera]
          Length = 489

 Score =  128 bits (321), Expect = 6e-28
 Identities = 63/104 (60%), Positives = 73/104 (70%)
 Frame = +1

Query: 16  PKPHQKPISITSSMPRKTPGGSRTRYSMXXXXXXXXXXKNINDSKQPFVITLNKYVKMIR 195
           P+P    +S  S+ PR+ PG    +  +          KN    ++P + TLNKYVK+IR
Sbjct: 41  PRPSTTVVSCVSTRPRRKPGPKPDKSEVEELVRVLM--KNFG-GERPLISTLNKYVKVIR 97

Query: 196 TEHCFMLFEELGKTDKWLQCLEVFRWMQKQRWYIADNGVYSKLI 327
           TEHCF LFEELGKTDKWLQCLEVFRWMQKQRWYIADNGVYSKLI
Sbjct: 98  TEHCFRLFEELGKTDKWLQCLEVFRWMQKQRWYIADNGVYSKLI 141


>ref|XP_002306340.1| predicted protein [Populus trichocarpa] gi|222855789|gb|EEE93336.1|
           predicted protein [Populus trichocarpa]
          Length = 416

 Score =  122 bits (306), Expect = 3e-26
 Identities = 61/97 (62%), Positives = 70/97 (72%)
 Frame = +1

Query: 37  ISITSSMPRKTPGGSRTRYSMXXXXXXXXXXKNINDSKQPFVITLNKYVKMIRTEHCFML 216
           +S  S+ P+K P    T              ++ +D KQP V TLNKYVK++RTEHCFML
Sbjct: 3   VSCVSTRPKKRP--VPTDEKSEAQELVRVLVRSFSD-KQPLVKTLNKYVKVMRTEHCFML 59

Query: 217 FEELGKTDKWLQCLEVFRWMQKQRWYIADNGVYSKLI 327
           FEELGKTDKWLQCLEVFRWMQKQRWY+ADNG YSKLI
Sbjct: 60  FEELGKTDKWLQCLEVFRWMQKQRWYVADNGCYSKLI 96


>ref|XP_003630096.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355524118|gb|AET04572.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 635

 Score =  118 bits (296), Expect = 4e-25
 Identities = 53/66 (80%), Positives = 61/66 (92%)
 Frame = +1

Query: 130 KNINDSKQPFVITLNKYVKMIRTEHCFMLFEELGKTDKWLQCLEVFRWMQKQRWYIADNG 309
           + I+D K+P + TLNKYVK++RTEHCF+LFEELGK DKWLQCLEVFRWMQ+QRWYIADNG
Sbjct: 60  RKISD-KEPLLKTLNKYVKLVRTEHCFLLFEELGKHDKWLQCLEVFRWMQRQRWYIADNG 118

Query: 310 VYSKLI 327
           VYSKLI
Sbjct: 119 VYSKLI 124


>ref|XP_004169853.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like [Cucumis sativus]
          Length = 494

 Score =  115 bits (288), Expect = 4e-24
 Identities = 51/66 (77%), Positives = 61/66 (92%)
 Frame = +1

Query: 130 KNINDSKQPFVITLNKYVKMIRTEHCFMLFEELGKTDKWLQCLEVFRWMQKQRWYIADNG 309
           +N +D K+P + TL+KYV+++RTEHCF+LFEELGK DKWL+CLEVFRWMQKQRWYIADNG
Sbjct: 70  RNFSD-KEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLECLEVFRWMQKQRWYIADNG 128

Query: 310 VYSKLI 327
           VYSKLI
Sbjct: 129 VYSKLI 134


>ref|XP_004143565.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like [Cucumis sativus]
          Length = 528

 Score =  115 bits (288), Expect = 4e-24
 Identities = 51/66 (77%), Positives = 61/66 (92%)
 Frame = +1

Query: 130 KNINDSKQPFVITLNKYVKMIRTEHCFMLFEELGKTDKWLQCLEVFRWMQKQRWYIADNG 309
           +N +D K+P + TL+KYV+++RTEHCF+LFEELGK DKWL+CLEVFRWMQKQRWYIADNG
Sbjct: 70  RNFSD-KEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLECLEVFRWMQKQRWYIADNG 128

Query: 310 VYSKLI 327
           VYSKLI
Sbjct: 129 VYSKLI 134