BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00040715
         (537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265961.1| PREDICTED: pentatricopeptide repeat-containi...   149   3e-34
ref|XP_002309173.1| predicted protein [Populus trichocarpa] gi|2...   147   7e-34
ref|XP_004137893.1| PREDICTED: pentatricopeptide repeat-containi...   137   1e-30
ref|XP_003623530.1| Pentatricopeptide repeat-containing protein ...   132   4e-29
ref|XP_003533674.1| PREDICTED: pentatricopeptide repeat-containi...   129   2e-28

>ref|XP_002265961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
           mitochondrial-like [Vitis vinifera]
          Length = 505

 Score =  149 bits (375), Expect = 3e-34
 Identities = 76/163 (46%), Positives = 106/163 (65%), Gaps = 5/163 (3%)
 Frame = -3

Query: 475 LRKRRKWPLSPYKTKWQQTFCNQLALEKLQESV---QLFPNSAND--FVRVLIDSFSCYE 311
           LRKRRKWPLSPYK  W +TF ++ A++ L+ ++      P S ++  F+ +LIDSF  Y 
Sbjct: 13  LRKRRKWPLSPYKATWHETFHHRQAMQTLKNTIANQSPSPQSPSNSQFLSILIDSFRIYN 72

Query: 310 CSPTPNAYQFIFRFLIKNPSNWDQIPKVLDYLQKDVNFETPEWVLIDLIKFYGDFNMLDS 131
             PTPNAY+F+   L +    +  +P +L  L+K   FETPE++  +LIK YG+ NM + 
Sbjct: 73  SDPTPNAYRFVISTLTRC-RQFHHLPPLLHRLEKVEKFETPEFIFTNLIKVYGNANMFED 131

Query: 130 AIELFFNFNKFRCNPSVESLNTLLVVACKKKRGLEFVPEILMK 2
           A++LFF    FRC PSV SLN LL V CK++ GL  VP+IL+K
Sbjct: 132 AVDLFFRIPNFRCVPSVYSLNALLYVLCKRREGLVMVPQILLK 174


>ref|XP_002309173.1| predicted protein [Populus trichocarpa] gi|222855149|gb|EEE92696.1|
           predicted protein [Populus trichocarpa]
          Length = 506

 Score =  147 bits (372), Expect = 7e-34
 Identities = 80/170 (47%), Positives = 105/170 (61%), Gaps = 5/170 (2%)
 Frame = -3

Query: 496 KKFHNYHLRKRRKWPLSPYKTKWQQTFCNQLALEKLQESV-----QLFPNSANDFVRVLI 332
           KK  ++ LRK RKWP SPYK +W + F  Q A++ L++S      Q  PN  +  +  LI
Sbjct: 7   KKSASFFLRKHRKWPYSPYKARWHRIFNQQQAMQSLKQSALKPPQQESPNKPH-LLSSLI 65

Query: 331 DSFSCYECSPTPNAYQFIFRFLIKNPSNWDQIPKVLDYLQKDVNFETPEWVLIDLIKFYG 152
            SFS Y+  P P A+ FIF+ L+K  S +  IP VLD+L+K  +FE PE     LI+ YG
Sbjct: 66  HSFSIYDVEPAPKAFDFIFKTLVKT-SQFHHIPSVLDHLEKVESFEPPESTFAYLIEVYG 124

Query: 151 DFNMLDSAIELFFNFNKFRCNPSVESLNTLLVVACKKKRGLEFVPEILMK 2
             N    AIELF+   KFRC PSV SLNTL+ V C+  +GL+ VPEIL+K
Sbjct: 125 RTNKTHEAIELFYRIPKFRCVPSVYSLNTLISVLCRNSKGLKLVPEILLK 174


>ref|XP_004137893.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
           mitochondrial-like [Cucumis sativus]
           gi|449483740|ref|XP_004156675.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g38420,
           mitochondrial-like [Cucumis sativus]
          Length = 491

 Score =  137 bits (344), Expect = 1e-30
 Identities = 72/164 (43%), Positives = 100/164 (60%)
 Frame = -3

Query: 496 KKFHNYHLRKRRKWPLSPYKTKWQQTFCNQLALEKLQESVQLFPNSANDFVRVLIDSFSC 317
           KK +N+ LRK RKWPLS +KTKW QTF    AL  L+++    P+  +  +  L+ SF+ 
Sbjct: 9   KKSNNF-LRKHRKWPLSSHKTKWHQTFDQDEALRILKQAAN--PDQPHLLLSALVTSFTA 65

Query: 316 YECSPTPNAYQFIFRFLIKNPSNWDQIPKVLDYLQKDVNFETPEWVLIDLIKFYGDFNML 137
           Y C PTPNAY F+ + L +  S +  IP VL  LQ   NF+TPE++ +DLIK YG  N +
Sbjct: 66  YSCHPTPNAYYFVLKTLART-SQFHHIPPVLHRLQFLENFQTPEYIFVDLIKLYGRMNRI 124

Query: 136 DSAIELFFNFNKFRCNPSVESLNTLLVVACKKKRGLEFVPEILM 5
             A+ LF     FRC PS  SLN+LL    +  +GL  +P+I++
Sbjct: 125 QDAVTLFRRIPMFRCVPSTLSLNSLLSQLSRNAQGLPIIPDIIL 168


>ref|XP_003623530.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355498545|gb|AES79748.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 653

 Score =  132 bits (331), Expect = 4e-29
 Identities = 69/166 (41%), Positives = 101/166 (60%), Gaps = 2/166 (1%)
 Frame = -3

Query: 493 KFHNYHLRKRRKWPLSPYKTKWQQTFCNQLALEKLQESVQLFPNSANDFV-RVLIDSFSC 317
           K  N +LRK RKWP SPYKT W   F  Q A++ L  +     N+ + F+   LI SF  
Sbjct: 8   KTANKYLRKFRKWPHSPYKTSWHHNFGEQQAIQILINAKTQTQNNNDPFLLSTLIHSFKA 67

Query: 316 YECSPTPNAYQFIFRFLIK-NPSNWDQIPKVLDYLQKDVNFETPEWVLIDLIKFYGDFNM 140
           Y   P+P AY F+ + +   N S+  +IP +L++L+ +  FETPE++ + LI+FYG  + 
Sbjct: 68  YHTDPSPKAYFFLIKTITNINTSHLHEIPHILNHLEHNEKFETPEFIFMYLIRFYGFNDR 127

Query: 139 LDSAIELFFNFNKFRCNPSVESLNTLLVVACKKKRGLEFVPEILMK 2
           +  A++LFF   +FRC P+V SLN LL + C K+  L  VP+IL+K
Sbjct: 128 VQDAVDLFFRIPRFRCTPTVCSLNLLLSLLCGKRECLRMVPDILLK 173


>ref|XP_003533674.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
           mitochondrial-like [Glycine max]
          Length = 499

 Score =  129 bits (325), Expect = 2e-28
 Identities = 69/170 (40%), Positives = 99/170 (58%), Gaps = 9/170 (5%)
 Frame = -3

Query: 484 NYHLRKRRKWPLSPYKTKWQQTFCNQLALEKLQESVQLFPNSAND---------FVRVLI 332
           N +LRK +KWP SPYKT W   F  + A++ L+++     +S +           +  L+
Sbjct: 11  NKYLRKFKKWPHSPYKTSWHHNFGEEQAMKNLKQATLEMDSSQHPQRPNLPCPFLLSTLL 70

Query: 331 DSFSCYECSPTPNAYQFIFRFLIKNPSNWDQIPKVLDYLQKDVNFETPEWVLIDLIKFYG 152
           DSF  Y   PTP AY F+ + L    S    IP VL +L+    FETPE +L+ LI+FYG
Sbjct: 71  DSFKAYSIDPTPKAYFFVLKTLTST-SQLQDIPPVLYHLEHLEKFETPESILVYLIRFYG 129

Query: 151 DFNMLDSAIELFFNFNKFRCNPSVESLNTLLVVACKKKRGLEFVPEILMK 2
             + +  A++LFF   +FRC P+V SLN +L + C+K+  LE VPEIL+K
Sbjct: 130 LSDRVQDAVDLFFRIPRFRCTPTVCSLNLVLSLLCRKRDCLEMVPEILLK 179