BLASTX nr result

ID: Lithospermum22_contig00040714 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00040714
         (629 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containi...    98   1e-18
emb|CBI32762.3| unnamed protein product [Vitis vinifera]               98   1e-18
ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [S...    89   7e-16
ref|XP_002515739.1| pentatricopeptide repeat-containing protein,...    89   9e-16
tpg|DAA41715.1| TPA: hypothetical protein ZEAMMB73_506058 [Zea m...    88   1e-15

>ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Vitis vinifera]
          Length = 625

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 46/65 (70%), Positives = 56/65 (86%)
 Frame = -3

Query: 627 LKLFHEMARKGLAPSVITYTALISSLSKDGRSDEAFRLYEEMIEAGLVPDDIVYSSLVGS 448
           LKLF EM ++GL P+V+TYTA+IS LSKDGRS+EAF+LY+EM E GL PDD VYSSLVGS
Sbjct: 560 LKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGS 619

Query: 447 LHGSK 433
           LH ++
Sbjct: 620 LHSAE 624


>emb|CBI32762.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 46/64 (71%), Positives = 55/64 (85%)
 Frame = -3

Query: 627 LKLFHEMARKGLAPSVITYTALISSLSKDGRSDEAFRLYEEMIEAGLVPDDIVYSSLVGS 448
           LKLF EM ++GL P+V+TYTA+IS LSKDGRS+EAF+LY+EM E GL PDD VYSSLVGS
Sbjct: 564 LKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGS 623

Query: 447 LHGS 436
           LH +
Sbjct: 624 LHSA 627


>ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
           gi|241926744|gb|EER99888.1| hypothetical protein
           SORBIDRAFT_02g042500 [Sorghum bicolor]
          Length = 543

 Score = 89.0 bits (219), Expect = 7e-16
 Identities = 40/62 (64%), Positives = 53/62 (85%)
 Frame = -3

Query: 627 LKLFHEMARKGLAPSVITYTALISSLSKDGRSDEAFRLYEEMIEAGLVPDDIVYSSLVGS 448
           LKLF EM  +G  P+V+ YTALIS L+K+GRS+EAF+LY++M++AGL PDD +YS+LVGS
Sbjct: 467 LKLFEEMKHRGTEPNVVAYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALVGS 526

Query: 447 LH 442
           LH
Sbjct: 527 LH 528


>ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545176|gb|EEF46686.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 613

 Score = 88.6 bits (218), Expect = 9e-16
 Identities = 42/62 (67%), Positives = 53/62 (85%)
 Frame = -3

Query: 627 LKLFHEMARKGLAPSVITYTALISSLSKDGRSDEAFRLYEEMIEAGLVPDDIVYSSLVGS 448
           L L +E+ RKGLA S++TYTA+IS LSK+GRS+EAFRLY+EM+ AGL PDD VY+SLV +
Sbjct: 550 LTLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAFRLYDEMMAAGLTPDDRVYTSLVAN 609

Query: 447 LH 442
           LH
Sbjct: 610 LH 611


>tpg|DAA41715.1| TPA: hypothetical protein ZEAMMB73_506058 [Zea mays]
          Length = 521

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 39/62 (62%), Positives = 54/62 (87%)
 Frame = -3

Query: 627 LKLFHEMARKGLAPSVITYTALISSLSKDGRSDEAFRLYEEMIEAGLVPDDIVYSSLVGS 448
           LKLF EM ++G  P+V+ YTALIS L+K+GRS+ AF+LY++M++AGL+PDD +YS+LVGS
Sbjct: 450 LKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGS 509

Query: 447 LH 442
           LH
Sbjct: 510 LH 511



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 29/57 (50%), Positives = 37/57 (64%)
 Frame = -3

Query: 624 KLFHEMARKGLAPSVITYTALISSLSKDGRSDEAFRLYEEMIEAGLVPDDIVYSSLV 454
           +LF EMA KG  PSV+TY+ +I   +K GR  EA R  +EM + G VPD   Y+SLV
Sbjct: 381 RLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAERFRKEMEKKGFVPDVYTYASLV 437


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