BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00040691
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632146.1| PREDICTED: pentatricopeptide repeat-containi...   177   6e-43
emb|CBI16090.3| unnamed protein product [Vitis vinifera]              177   6e-43
ref|XP_002520529.1| pentatricopeptide repeat-containing protein,...   176   1e-42
ref|XP_004160205.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   171   4e-41
ref|XP_004143208.1| PREDICTED: pentatricopeptide repeat-containi...   171   4e-41

>ref|XP_003632146.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 628

 Score =  177 bits (450), Expect = 6e-43
 Identities = 83/133 (62%), Positives = 103/133 (77%)
 Frame = -1

Query: 404 WNAVIAGFSNLGIGDEAVKCFSRMREAGISVDYFTFSSVITSLGTMLAIEEGTQIHGLIF 225
           WNAVI G SNLG G+ A+KCFS+MR+AGI +D FTF+SV+ ++G +  ++EG QIH L+ 
Sbjct: 352 WNAVIGGLSNLGNGEAALKCFSKMRQAGIDMDLFTFTSVLRAIGMISTLDEGKQIHALVL 411

Query: 224 KTGNDLNIYVLNSLVSMYARCDRIEEAKKVFFSMQKHDVISWNGLLSGCAYHGYTREVVE 45
           K G   N+ V N LVSMYARC  I +AK+VF  M +HDVISWN LLSGCAYHGY RE VE
Sbjct: 412 KAGYGSNLNVQNGLVSMYARCGSINDAKRVFSLMDRHDVISWNSLLSGCAYHGYGREAVE 471

Query: 44  IFEKMRRSVVKPN 6
           +FE+MRRS VKP+
Sbjct: 472 LFEQMRRSGVKPD 484



 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 32/117 (27%), Positives = 65/117 (55%)
 Frame = -1

Query: 353 VKCFSRMREAGISVDYFTFSSVITSLGTMLAIEEGTQIHGLIFKTGNDLNIYVLNSLVSM 174
           +K  +++++ G +      + +++S     ++  G Q+H  I K G D N+Y+ ++LV M
Sbjct: 64  LKLLAQLQQHGSAPTAHILNRMVSSCAKSGSVFVGIQLHSTIIKVGFDSNVYICSALVDM 123

Query: 173 YARCDRIEEAKKVFFSMQKHDVISWNGLLSGCAYHGYTREVVEIFEKMRRSVVKPNP 3
           Y +C  +  A+++F  M   +V++WN L+SG  + G     +E+F +M +  + P P
Sbjct: 124 YGKCGAVSSAQRLFDEMPHRNVVTWNSLISGYLHVGCPEIAIELFLEMVKVGIDPTP 180



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 34/130 (26%), Positives = 71/130 (54%), Gaps = 2/130 (1%)
 Frame = -1

Query: 404 WNAVIAGFSNLGIGDEAVKCFSRMREAGISVDYFTFSSVITSLGTMLAIEEGTQIHGLIF 225
           W +++AG+++      A+     M+  GI ++Y T++ +++S  +   ++   Q+H  I 
Sbjct: 249 WTSMVAGYAHCQQPVAAMVLVRDMQRLGIRLNYVTYNCLLSSFSSSNDLDHCKQVHCRII 308

Query: 224 KTGNDLNIYVLNSLVSMYARC--DRIEEAKKVFFSMQKHDVISWNGLLSGCAYHGYTREV 51
           + G + N Y+  +LV++Y+ C    +E+  KV   + + D ISWN ++ G +  G     
Sbjct: 309 REGLESNSYLEVTLVTVYSECSSSSLEDFNKVCSGVTRWDQISWNAVIGGLSNLGNGEAA 368

Query: 50  VEIFEKMRRS 21
           ++ F KMR++
Sbjct: 369 LKCFSKMRQA 378


>emb|CBI16090.3| unnamed protein product [Vitis vinifera]
          Length = 458

 Score =  177 bits (450), Expect = 6e-43
 Identities = 83/133 (62%), Positives = 103/133 (77%)
 Frame = -1

Query: 404 WNAVIAGFSNLGIGDEAVKCFSRMREAGISVDYFTFSSVITSLGTMLAIEEGTQIHGLIF 225
           WNAVI G SNLG G+ A+KCFS+MR+AGI +D FTF+SV+ ++G +  ++EG QIH L+ 
Sbjct: 182 WNAVIGGLSNLGNGEAALKCFSKMRQAGIDMDLFTFTSVLRAIGMISTLDEGKQIHALVL 241

Query: 224 KTGNDLNIYVLNSLVSMYARCDRIEEAKKVFFSMQKHDVISWNGLLSGCAYHGYTREVVE 45
           K G   N+ V N LVSMYARC  I +AK+VF  M +HDVISWN LLSGCAYHGY RE VE
Sbjct: 242 KAGYGSNLNVQNGLVSMYARCGSINDAKRVFSLMDRHDVISWNSLLSGCAYHGYGREAVE 301

Query: 44  IFEKMRRSVVKPN 6
           +FE+MRRS VKP+
Sbjct: 302 LFEQMRRSGVKPD 314



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 34/130 (26%), Positives = 71/130 (54%), Gaps = 2/130 (1%)
 Frame = -1

Query: 404 WNAVIAGFSNLGIGDEAVKCFSRMREAGISVDYFTFSSVITSLGTMLAIEEGTQIHGLIF 225
           W +++AG+++      A+     M+  GI ++Y T++ +++S  +   ++   Q+H  I 
Sbjct: 79  WTSMVAGYAHCQQPVAAMVLVRDMQRLGIRLNYVTYNCLLSSFSSSNDLDHCKQVHCRII 138

Query: 224 KTGNDLNIYVLNSLVSMYARC--DRIEEAKKVFFSMQKHDVISWNGLLSGCAYHGYTREV 51
           + G + N Y+  +LV++Y+ C    +E+  KV   + + D ISWN ++ G +  G     
Sbjct: 139 REGLESNSYLEVTLVTVYSECSSSSLEDFNKVCSGVTRWDQISWNAVIGGLSNLGNGEAA 198

Query: 50  VEIFEKMRRS 21
           ++ F KMR++
Sbjct: 199 LKCFSKMRQA 208


>ref|XP_002520529.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540371|gb|EEF41942.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 606

 Score =  176 bits (447), Expect = 1e-42
 Identities = 76/133 (57%), Positives = 108/133 (81%)
 Frame = -1

Query: 404 WNAVIAGFSNLGIGDEAVKCFSRMREAGISVDYFTFSSVITSLGTMLAIEEGTQIHGLIF 225
           WNAVIAG+SNLG+G++A+KCF  MR A I +D++TF+S++ ++G  LAIEEG ++H LI 
Sbjct: 330 WNAVIAGYSNLGLGEDALKCFCEMRHANIKMDFYTFTSLLGAIGAFLAIEEGREMHALIV 389

Query: 224 KTGNDLNIYVLNSLVSMYARCDRIEEAKKVFFSMQKHDVISWNGLLSGCAYHGYTREVVE 45
           KTG   ++YV N LVSMYARC  I+++K+VF+ M+ HDV+SWN LL+GCA+HG+  E VE
Sbjct: 390 KTGYASSVYVQNGLVSMYARCGAIDDSKRVFWLMEDHDVVSWNALLTGCAHHGFGNEAVE 449

Query: 44  IFEKMRRSVVKPN 6
           +FE+MR++ +KPN
Sbjct: 450 LFEQMRKTKIKPN 462



 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 36/132 (27%), Positives = 74/132 (56%), Gaps = 1/132 (0%)
 Frame = -1

Query: 404 WNAVIAGFSNLGIGDEAVKCFSRMREAGISVDYFTFSSVITSLGTMLAIEEGTQIHGLIF 225
           W A++  ++     DEA+     M   GI  +Y T++S+++S      ++   Q+H  I 
Sbjct: 228 WTAMVTAYAQNEQPDEAMILVREMMRLGIKANYVTYNSLLSSFSGPKYMQYCKQVHCSII 287

Query: 224 KTGNDLNIYVLNSLVSMYARC-DRIEEAKKVFFSMQKHDVISWNGLLSGCAYHGYTREVV 48
           + G + N+Y+  +LV++Y++C + +E+  K+   +Q  D ISWN +++G +  G   + +
Sbjct: 288 RCGLECNLYIAATLVTVYSKCTNNLEDFNKISSGVQLSDQISWNAVIAGYSNLGLGEDAL 347

Query: 47  EIFEKMRRSVVK 12
           + F +MR + +K
Sbjct: 348 KCFCEMRHANIK 359



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 36/133 (27%), Positives = 67/133 (50%)
 Frame = -1

Query: 404 WNAVIAGFSNLGIGDEAVKCFSRMREAGISVDYFTFSSVITSLGTMLAIEEGTQIHGLIF 225
           WN++I G+ N+        C  R       V  F+ S+ +     +     G Q+HGL  
Sbjct: 138 WNSLIFGYLNV-----MPTCAMR------GVTSFSVSTCLVVCSQLEVRNFGAQVHGLSL 186

Query: 224 KTGNDLNIYVLNSLVSMYARCDRIEEAKKVFFSMQKHDVISWNGLLSGCAYHGYTREVVE 45
           K G D N++V  +L+ MY++CD ++++ +VF  M   +V++W  +++  A +    E + 
Sbjct: 187 KLGFDNNVFVGTALIDMYSKCDGVDDSWRVFDYMVDKNVVTWTAMVTAYAQNEQPDEAMI 246

Query: 44  IFEKMRRSVVKPN 6
           +  +M R  +K N
Sbjct: 247 LVREMMRLGIKAN 259



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
 Frame = -1

Query: 335 MREAGISVDYFTFSSVITSLGTMLAIEEGTQIHGLIFKTGNDLNIYVLNSLVSMYARCDR 156
           +R    S  YF  + V++      + + G Q+H  I + G   N+++ +++V MYA+C  
Sbjct: 61  LRNGSFSNPYF-INKVVSFCAKFASYDLGIQLHSTIIRMGFTSNVHICSAVVDMYAKCSE 119

Query: 155 IEEAKKVFFSMQKHDVISWNGLLSG-------CAYHGYT 60
           I+ A +VF  M + + ++WN L+ G       CA  G T
Sbjct: 120 IQSAHEVFNEMPERNDVTWNSLIFGYLNVMPTCAMRGVT 158


>ref|XP_004160205.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g11290-like [Cucumis sativus]
          Length = 616

 Score =  171 bits (434), Expect = 4e-41
 Identities = 78/133 (58%), Positives = 102/133 (76%)
 Frame = -1

Query: 404 WNAVIAGFSNLGIGDEAVKCFSRMREAGISVDYFTFSSVITSLGTMLAIEEGTQIHGLIF 225
           WNAVIAGF+NLGIG+EA++CF +MR     VD+FTF+S+  ++G   A+EEG QIHGL++
Sbjct: 340 WNAVIAGFTNLGIGEEALECFIQMRREKFDVDFFTFTSIFKAIGMTSALEEGKQIHGLVY 399

Query: 224 KTGNDLNIYVLNSLVSMYARCDRIEEAKKVFFSMQKHDVISWNGLLSGCAYHGYTREVVE 45
           KTG  LN+ V N LVSMYAR   I ++K VF  M +HD+ISWN LLSGCAYHG   E ++
Sbjct: 400 KTGYTLNLSVQNGLVSMYARSGAIRDSKMVFSMMNEHDLISWNSLLSGCAYHGCGEEAID 459

Query: 44  IFEKMRRSVVKPN 6
           +FEKMRR+ +KP+
Sbjct: 460 LFEKMRRTCIKPD 472



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 34/133 (25%), Positives = 66/133 (49%)
 Frame = -1

Query: 404 WNAVIAGFSNLGIGDEAVKCFSRMREAGISVDYFTFSSVITSLGTMLAIEEGTQIHGLIF 225
           WN+++ G+   G    AV  F  M + GI    F+ S  +     +   + G+Q+H +  
Sbjct: 137 WNSLVTGYLQAGYPLMAVSLFLEMLKKGIEPTPFSLSGGLVGCSQLQKGDLGSQLHAMSL 196

Query: 224 KTGNDLNIYVLNSLVSMYARCDRIEEAKKVFFSMQKHDVISWNGLLSGCAYHGYTREVVE 45
           K     N+ V   L+ MY++C  ++++++VF  M   +V +W  ++SG A +    E + 
Sbjct: 197 KLRFSSNVVVGTGLIDMYSKCCNLQDSRRVFDIMLNKNVFTWTSMISGYARNQLPHEAMX 256

Query: 44  IFEKMRRSVVKPN 6
           +  +M    ++PN
Sbjct: 257 LMREMLHLNLEPN 269



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 32/86 (37%), Positives = 48/86 (55%)
 Frame = -1

Query: 260 IEEGTQIHGLIFKTGNDLNIYVLNSLVSMYARCDRIEEAKKVFFSMQKHDVISWNGLLSG 81
           ++ G Q+H  I K G  LN Y+  +LV MY +C  I +A KVF  M    V++WN L++G
Sbjct: 84  LDFGIQVHSTIIKLGFSLNPYIFTALVDMYGKCWSISDAHKVFDEMSCPSVVTWNSLVTG 143

Query: 80  CAYHGYTREVVEIFEKMRRSVVKPNP 3
               GY    V +F +M +  ++P P
Sbjct: 144 YLQAGYPLMAVSLFLEMLKKGIEPTP 169



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 36/128 (28%), Positives = 68/128 (53%), Gaps = 1/128 (0%)
 Frame = -1

Query: 404 WNAVIAGFSNLGIGDEAVKCFSRMREAGISVDYFTFSSVITSLGTMLAIEEGTQIHGLIF 225
           W ++I+G++   +  EA+     M    +  +  T++S+++S       ++  QIH  I 
Sbjct: 238 WTSMISGYARNQLPHEAMXLMREMLHLNLEPNGMTYNSLLSSFSCPRHFDKCKQIHCRII 297

Query: 224 KTGNDLNIYVLNSLVSMYARC-DRIEEAKKVFFSMQKHDVISWNGLLSGCAYHGYTREVV 48
             G + N Y+  +LV+ Y+ C   +E+ +KV  +++  D ISWN +++G    G   E +
Sbjct: 298 TEGYESNNYIAVTLVTAYSECCGSLEDYRKVCSNIRMSDQISWNAVIAGFTNLGIGEEAL 357

Query: 47  EIFEKMRR 24
           E F +MRR
Sbjct: 358 ECFIQMRR 365


>ref|XP_004143208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 616

 Score =  171 bits (434), Expect = 4e-41
 Identities = 78/133 (58%), Positives = 102/133 (76%)
 Frame = -1

Query: 404 WNAVIAGFSNLGIGDEAVKCFSRMREAGISVDYFTFSSVITSLGTMLAIEEGTQIHGLIF 225
           WNAVIAGF+NLGIG+EA++CF +MR     VD+FTF+S+  ++G   A+EEG QIHGL++
Sbjct: 340 WNAVIAGFTNLGIGEEALECFIQMRREKFDVDFFTFTSIFKAIGMTSALEEGKQIHGLVY 399

Query: 224 KTGNDLNIYVLNSLVSMYARCDRIEEAKKVFFSMQKHDVISWNGLLSGCAYHGYTREVVE 45
           KTG  LN+ V N LVSMYAR   I ++K VF  M +HD+ISWN LLSGCAYHG   E ++
Sbjct: 400 KTGYTLNLSVQNGLVSMYARSGAIRDSKMVFSMMNEHDLISWNSLLSGCAYHGCGEEAID 459

Query: 44  IFEKMRRSVVKPN 6
           +FEKMRR+ +KP+
Sbjct: 460 LFEKMRRTCIKPD 472



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 35/133 (26%), Positives = 66/133 (49%)
 Frame = -1

Query: 404 WNAVIAGFSNLGIGDEAVKCFSRMREAGISVDYFTFSSVITSLGTMLAIEEGTQIHGLIF 225
           WN+++ G+   G    AV  F  M + GI    F+ S  +     +   + G+Q+H +  
Sbjct: 137 WNSLVTGYLQAGYPLMAVSLFLEMLKKGIEPTPFSLSGGLVGCSQLQKGDLGSQLHAMSL 196

Query: 224 KTGNDLNIYVLNSLVSMYARCDRIEEAKKVFFSMQKHDVISWNGLLSGCAYHGYTREVVE 45
           K     N+ V   L+ MY++C  ++++++VF  M   +V +W  ++SG A +    E + 
Sbjct: 197 KLRFSSNVVVGTGLIDMYSKCCNLQDSRRVFDIMLNKNVFTWTSMISGYARNQLPHEAMI 256

Query: 44  IFEKMRRSVVKPN 6
           +  +M    +KPN
Sbjct: 257 LMREMLHLNLKPN 269



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 32/86 (37%), Positives = 48/86 (55%)
 Frame = -1

Query: 260 IEEGTQIHGLIFKTGNDLNIYVLNSLVSMYARCDRIEEAKKVFFSMQKHDVISWNGLLSG 81
           ++ G Q+H  I K G  LN Y+  +LV MY +C  I +A KVF  M    V++WN L++G
Sbjct: 84  LDFGIQVHSTIIKLGFSLNPYIFTALVDMYGKCWSISDAHKVFDEMSCPSVVTWNSLVTG 143

Query: 80  CAYHGYTREVVEIFEKMRRSVVKPNP 3
               GY    V +F +M +  ++P P
Sbjct: 144 YLQAGYPLMAVSLFLEMLKKGIEPTP 169



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 36/128 (28%), Positives = 68/128 (53%), Gaps = 1/128 (0%)
 Frame = -1

Query: 404 WNAVIAGFSNLGIGDEAVKCFSRMREAGISVDYFTFSSVITSLGTMLAIEEGTQIHGLIF 225
           W ++I+G++   +  EA+     M    +  +  T++S+++S       ++  QIH  I 
Sbjct: 238 WTSMISGYARNQLPHEAMILMREMLHLNLKPNGMTYNSLLSSFSCPRHFDKCKQIHCRII 297

Query: 224 KTGNDLNIYVLNSLVSMYARC-DRIEEAKKVFFSMQKHDVISWNGLLSGCAYHGYTREVV 48
             G + N Y+  +LV+ Y+ C   +E+ +KV  +++  D ISWN +++G    G   E +
Sbjct: 298 TEGYESNNYIAVTLVTAYSECCGSLEDYRKVCSNIRMSDQISWNAVIAGFTNLGIGEEAL 357

Query: 47  EIFEKMRR 24
           E F +MRR
Sbjct: 358 ECFIQMRR 365