BLASTX nr result

ID: Lithospermum22_contig00040654 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00040654
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525990.1| protein with unknown function [Ricinus commu...    78   6e-13
ref|XP_002314789.1| predicted protein [Populus trichocarpa] gi|2...    78   6e-13
ref|XP_002887320.1| zinc finger (Ran-binding) family protein [Ar...    65   7e-09
ref|XP_002281205.1| PREDICTED: uncharacterized protein LOC100264...    65   7e-09
ref|XP_003637681.1| Zinc finger protein VAR3 [Medicago truncatul...    64   1e-08

>ref|XP_002525990.1| protein with unknown function [Ricinus communis]
           gi|223534722|gb|EEF36414.1| protein with unknown
           function [Ricinus communis]
          Length = 557

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 36/59 (61%), Positives = 45/59 (76%), Gaps = 6/59 (10%)
 Frame = +1

Query: 223 VEMSHPWPEWSALMDKLFKTGYFQENN------ELGTKDVHFIRTACLNFARDRYDLIR 381
           V++SHPWPEW  LM+ L K GYF+ N       ELGTK+ ++IRTACLNFARD+Y+LIR
Sbjct: 89  VQISHPWPEWVDLMEFLLKRGYFEANENPFLNGELGTKETNWIRTACLNFARDQYELIR 147


>ref|XP_002314789.1| predicted protein [Populus trichocarpa] gi|222863829|gb|EEF00960.1|
           predicted protein [Populus trichocarpa]
          Length = 431

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 37/60 (61%), Positives = 43/60 (71%), Gaps = 6/60 (10%)
 Frame = +1

Query: 223 VEMSHPWPEWSALMDKLFKTGYFQE------NNELGTKDVHFIRTACLNFARDRYDLIRY 384
           V++SHPWPEW  LM+ L K GYF+       N ELG+KD   IRTACLNFARDR+ LIRY
Sbjct: 5   VQISHPWPEWVDLMELLLKRGYFEAGGNPVGNKELGSKDASCIRTACLNFARDRFGLIRY 64


>ref|XP_002887320.1| zinc finger (Ran-binding) family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297333161|gb|EFH63579.1| zinc finger
           (Ran-binding) family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 471

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 31/55 (56%), Positives = 38/55 (69%), Gaps = 3/55 (5%)
 Frame = +1

Query: 232 SHPWPEWSALMDKLFKTGYFQE---NNELGTKDVHFIRTACLNFARDRYDLIRYL 387
           SHPWPEW  L+  L K GYF E   N  + +K+ + IRTACLNFAR R+ L+RYL
Sbjct: 43  SHPWPEWLDLIGMLAKKGYFVESSGNPLMSSKESNHIRTACLNFARHRFTLVRYL 97


>ref|XP_002281205.1| PREDICTED: uncharacterized protein LOC100264495 [Vitis vinifera]
          Length = 528

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 30/57 (52%), Positives = 37/57 (64%), Gaps = 7/57 (12%)
 Frame = +1

Query: 235 HPWPEWSALMDKLFKTGYFQE-------NNELGTKDVHFIRTACLNFARDRYDLIRY 384
           HPWPEW  LM+ L K GY +E       N  +G K+ + IRTACL+F RDR+DLI Y
Sbjct: 78  HPWPEWVDLMEILTKKGYLEEGDGNPFQNGAMGVKEANRIRTACLDFTRDRFDLISY 134


>ref|XP_003637681.1| Zinc finger protein VAR3 [Medicago truncatula]
           gi|355503616|gb|AES84819.1| Zinc finger protein VAR3
           [Medicago truncatula]
          Length = 560

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 44/116 (37%), Positives = 55/116 (47%), Gaps = 8/116 (6%)
 Frame = +1

Query: 64  ILGHKHNYRTNPAIEFILEEVNXXXXXXXXXXXXXXNEKDEPIIDLPN--ELPIKVEMSH 237
           IL   H++  NP I  IL                  NE DEP        E P   ++SH
Sbjct: 5   ILKRCHHFHYNPTIT-ILNGKTFHTSLIHTLSNPNQNEFDEPKWKNQQLQENPA-FQISH 62

Query: 238 PWPEWSALMDKLFKTGYFQ------ENNELGTKDVHFIRTACLNFARDRYDLIRYL 387
           PWPEW  LM+ L K G+F       EN  LG K+ + IRTACLNF RD   ++ +L
Sbjct: 63  PWPEWVYLMEYLIKKGHFHAEGNPFENPPLGAKESNLIRTACLNFGRDHAHILSFL 118


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