BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00040652
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002889139.1| pentatricopeptide repeat-containing protein ...   151   5e-35
ref|NP_177860.2| pentatricopeptide repeat-containing protein [Ar...   150   8e-35
gb|AAG29201.1|AC078898_11 hypothetical protein [Arabidopsis thal...   150   1e-34
ref|XP_003526650.1| PREDICTED: pentatricopeptide repeat-containi...   143   1e-32
ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containi...   141   5e-32

>ref|XP_002889139.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297334980|gb|EFH65398.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 482

 Score =  151 bits (382), Expect = 5e-35
 Identities = 66/119 (55%), Positives = 94/119 (78%)
 Frame = -2

Query: 358 RSKMYLRLMFGRRMYSSKGAAQDITEVTKKISKILMSCPKLGLDTVLEQNGIRASPEVVE 179
           +S++  +     R+YSS    +D+ +V K ISK+LMS P+L +D+ L+Q+G+R SPEVVE
Sbjct: 10  QSRLCSKSFLSARLYSSSEQVRDVADVAKNISKVLMSSPQLVIDSALDQSGLRVSPEVVE 69

Query: 178 EVLKKFENAGTLAYTFFEWADRQRHYEHTVKAYHYMIESVAKVRQYQIMWDLVNSMRKK 2
           +VL +F NAG LAY FF+W+++QRHYEH+V+AYH MIES AK+RQY++MWDL+N+M KK
Sbjct: 70  DVLYRFRNAGLLAYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMMKK 128


>ref|NP_177860.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|193806398|sp|Q9FVX2.2|PP129_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g77360, mitochondrial; Flags: Precursor
           gi|332197848|gb|AEE35969.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 517

 Score =  150 bits (380), Expect = 8e-35
 Identities = 68/129 (52%), Positives = 96/129 (74%)
 Frame = -2

Query: 388 FHITRMSSFSRSKMYLRLMFGRRMYSSKGAAQDITEVTKKISKILMSCPKLGLDTVLEQN 209
           F++T      +S+   +     R+YSS    +D+ +V K ISK+LMS P+L LD+ L+Q+
Sbjct: 35  FNMTIRIINRQSRFCCKSFLSARLYSSSEQVRDVADVAKNISKVLMSSPQLVLDSALDQS 94

Query: 208 GIRASPEVVEEVLKKFENAGTLAYTFFEWADRQRHYEHTVKAYHYMIESVAKVRQYQIMW 29
           G+R S EVVE+VL +F NAG L Y FF+W+++QRHYEH+V+AYH MIES AK+RQY++MW
Sbjct: 95  GLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMW 154

Query: 28  DLVNSMRKK 2
           DL+N+MRKK
Sbjct: 155 DLINAMRKK 163


>gb|AAG29201.1|AC078898_11 hypothetical protein [Arabidopsis thaliana]
          Length = 481

 Score =  150 bits (379), Expect = 1e-34
 Identities = 66/119 (55%), Positives = 92/119 (77%)
 Frame = -2

Query: 358 RSKMYLRLMFGRRMYSSKGAAQDITEVTKKISKILMSCPKLGLDTVLEQNGIRASPEVVE 179
           +S+   +     R+YSS    +D+ +V K ISK+LMS P+L LD+ L+Q+G+R S EVVE
Sbjct: 9   QSRFCCKSFLSARLYSSSEQVRDVADVAKNISKVLMSSPQLVLDSALDQSGLRVSQEVVE 68

Query: 178 EVLKKFENAGTLAYTFFEWADRQRHYEHTVKAYHYMIESVAKVRQYQIMWDLVNSMRKK 2
           +VL +F NAG L Y FF+W+++QRHYEH+V+AYH MIES AK+RQY++MWDL+N+MRKK
Sbjct: 69  DVLNRFRNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKK 127


>ref|XP_003526650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Glycine max]
          Length = 461

 Score =  143 bits (361), Expect = 1e-32
 Identities = 61/104 (58%), Positives = 86/104 (82%)
 Frame = -2

Query: 313 SSKGAAQDITEVTKKISKILMSCPKLGLDTVLEQNGIRASPEVVEEVLKKFENAGTLAYT 134
           +S+   QD+ E ++++ K++M+CP LGLDT L Q G+R SP++VE VLK+FENAG  A+ 
Sbjct: 4   ASEAMIQDVGEASERVCKVMMTCPTLGLDTALNQTGVRVSPDLVENVLKRFENAGMPAFR 63

Query: 133 FFEWADRQRHYEHTVKAYHYMIESVAKVRQYQIMWDLVNSMRKK 2
           FFEWA++QR Y H+++AYH MIES+AK+RQYQI+WDLV++MRKK
Sbjct: 64  FFEWAEKQRGYSHSIRAYHLMIESLAKIRQYQIVWDLVSAMRKK 107


>ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Vitis vinifera]
          Length = 476

 Score =  141 bits (356), Expect = 5e-32
 Identities = 67/104 (64%), Positives = 83/104 (79%)
 Frame = -2

Query: 319 MYSSKGAAQDITEVTKKISKILMSCPKLGLDTVLEQNGIRASPEVVEEVLKKFENAGTLA 140
           M SS    ++  + TK+I KI++SCPKL LDT L ++GIR SP VVE VLK+FENAG LA
Sbjct: 1   MCSSGEIIKETADPTKRICKIMISCPKLELDTSLSESGIRVSPIVVENVLKRFENAGMLA 60

Query: 139 YTFFEWADRQRHYEHTVKAYHYMIESVAKVRQYQIMWDLVNSMR 8
           Y FFEWA +QR+Y H+++AYH MIES+AK+RQYQIMWDLVN MR
Sbjct: 61  YQFFEWAGKQRNYTHSIRAYHTMIESLAKIRQYQIMWDLVNKMR 104