BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00040648
         (465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003628741.1| Pentatricopeptide repeat-containing protein ...   130   1e-28
ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containi...   126   2e-27
ref|XP_003547890.1| PREDICTED: pentatricopeptide repeat-containi...   125   4e-27
ref|XP_002311462.1| predicted protein [Populus trichocarpa] gi|2...   125   4e-27
emb|CBI16742.3| unnamed protein product [Vitis vinifera]              119   2e-25

>ref|XP_003628741.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355522763|gb|AET03217.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 758

 Score =  130 bits (326), Expect = 1e-28
 Identities = 61/154 (39%), Positives = 100/154 (64%)
 Frame = -1

Query: 465 KIGFDRDVFVATRLIEMYGEKGDVCHAGRVFDALVVKDKIVWTTMLEQYVIKCGDMEKAC 286
           K GF  + FVAT LI+MY +KG V  A +VF  +  ++ +VWT ++  Y++ CGD+    
Sbjct: 138 KHGFKSNSFVATSLIDMYSKKGCVEDAYKVFGEMHERNVVVWTAIINGYIL-CGDVVSGR 196

Query: 285 ELFDLMPSRDLVDWTMMVSGHVNVGNLESAKRFFDDAPDKDLLMYNIILGGHAKNEELEV 106
            LFDL P RD+V W++++SG++   N+ +A+  FD  P++D + +N +L G+A N E+E+
Sbjct: 197 RLFDLAPERDVVMWSVLISGYIESKNMAAARELFDKMPNRDTMSWNAMLNGYAVNGEVEM 256

Query: 105 LVRFFHEMPMRDLVSWNTVIGGLVRGKRINEAIK 4
             + F EMP R++ SWN +IGG V+    +E ++
Sbjct: 257 FEKVFDEMPERNVFSWNGLIGGYVKNGLFSETLE 290


>ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 679

 Score =  126 bits (317), Expect = 2e-27
 Identities = 56/154 (36%), Positives = 99/154 (64%)
 Frame = -1

Query: 465 KIGFDRDVFVATRLIEMYGEKGDVCHAGRVFDALVVKDKIVWTTMLEQYVIKCGDMEKAC 286
           KIGF  DVFV   L+ MY + G++  A +VFD ++ KD ++W ++++ Y  +CG+++ A 
Sbjct: 140 KIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYA-RCGEIDIAL 198

Query: 285 ELFDLMPSRDLVDWTMMVSGHVNVGNLESAKRFFDDAPDKDLLMYNIILGGHAKNEELEV 106
           +LF+ MP RD   WT++V G    G +ESA++ FD  P ++L+ +N ++ G+ K+ + + 
Sbjct: 199 QLFEEMPERDAFSWTVLVDGLSKCGKVESARKLFDQMPCRNLVSWNAMINGYMKSGDFDS 258

Query: 105 LVRFFHEMPMRDLVSWNTVIGGLVRGKRINEAIK 4
            +  F++MP+ DLV+WN +I G     +  +A+K
Sbjct: 259 ALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVK 292


>ref|XP_003547890.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Glycine max]
          Length = 619

 Score =  125 bits (314), Expect = 4e-27
 Identities = 64/156 (41%), Positives = 96/156 (61%), Gaps = 2/156 (1%)
 Frame = -1

Query: 465 KIGFDRDVFVATRLIEMYGEKGDV--CHAGRVFDALVVKDKIVWTTMLEQYVIKCGDMEK 292
           K GF  + FV   LI MY  +G V    A +VF  +  K+   WT ++  +V  C DM  
Sbjct: 148 KRGFKSNTFVGCALIHMYSLRGGVFVADAYKVFAEMRDKNVFAWTAIVAAHVA-CRDMVS 206

Query: 291 ACELFDLMPSRDLVDWTMMVSGHVNVGNLESAKRFFDDAPDKDLLMYNIILGGHAKNEEL 112
           A  LFDL P RD+V W ++VSG++ +G++ +A+  FD  PD+D++ +N +L G+A N E+
Sbjct: 207 ARRLFDLAPQRDVVLWNVVVSGYIELGDMVAARELFDRMPDRDVMSWNTVLSGYATNGEV 266

Query: 111 EVLVRFFHEMPMRDLVSWNTVIGGLVRGKRINEAIK 4
           E  V+ F EMP+R++ SWN +IGG VR     EA++
Sbjct: 267 ESFVKLFEEMPVRNVYSWNGLIGGYVRNGLFKEALE 302



 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 39/124 (31%), Positives = 71/124 (57%)
 Frame = -1

Query: 453 DRDVFVATRLIEMYGEKGDVCHAGRVFDALVVKDKIVWTTMLEQYVIKCGDMEKACELFD 274
           D++VF  T ++  +    D+  A R+FD    +D ++W  ++  Y I+ GDM  A ELFD
Sbjct: 185 DKNVFAWTAIVAAHVACRDMVSARRLFDLAPQRDVVLWNVVVSGY-IELGDMVAARELFD 243

Query: 273 LMPSRDLVDWTMMVSGHVNVGNLESAKRFFDDAPDKDLLMYNIILGGHAKNEELEVLVRF 94
            MP RD++ W  ++SG+   G +ES  + F++ P +++  +N ++GG+ +N   +  +  
Sbjct: 244 RMPDRDVMSWNTVLSGYATNGEVESFVKLFEEMPVRNVYSWNGLIGGYVRNGLFKEALEC 303

Query: 93  FHEM 82
           F  M
Sbjct: 304 FKRM 307


>ref|XP_002311462.1| predicted protein [Populus trichocarpa] gi|222851282|gb|EEE88829.1|
           predicted protein [Populus trichocarpa]
          Length = 538

 Score =  125 bits (314), Expect = 4e-27
 Identities = 62/153 (40%), Positives = 91/153 (59%)
 Frame = -1

Query: 465 KIGFDRDVFVATRLIEMYGEKGDVCHAGRVFDALVVKDKIVWTTMLEQYVIKCGDMEKAC 286
           K GF  + FVAT LI+MY   G +  A RVF  ++ ++ I WT M+  Y I C D+  A 
Sbjct: 79  KSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAWTAMINGY-ITCCDLVTAR 137

Query: 285 ELFDLMPSRDLVDWTMMVSGHVNVGNLESAKRFFDDAPDKDLLMYNIILGGHAKNEELEV 106
            LFDL P RD+V W  M+SG++   ++  A+  FD  P+KD++ +N +L G+A N ++  
Sbjct: 138 RLFDLAPERDIVLWNTMISGYIEAKDVIRARELFDKMPNKDVMSWNTVLNGYASNGDVMA 197

Query: 105 LVRFFHEMPMRDLVSWNTVIGGLVRGKRINEAI 7
             R F EMP R++ SWN +IGG  R    +E +
Sbjct: 198 CERLFEEMPERNVFSWNALIGGYTRNGCFSEVL 230


>emb|CBI16742.3| unnamed protein product [Vitis vinifera]
          Length = 674

 Score =  119 bits (299), Expect = 2e-25
 Identities = 54/150 (36%), Positives = 93/150 (62%)
 Frame = -1

Query: 453 DRDVFVATRLIEMYGEKGDVCHAGRVFDALVVKDKIVWTTMLEQYVIKCGDMEKACELFD 274
           DR +   + +I+ Y + G +  A +VFDA++  +   WT+++  Y  + G + KAC+LFD
Sbjct: 128 DRTIVAESAMIDGYAKAGLMDSAQKVFDAMIDTNVFSWTSLISGY-FRDGQVAKACQLFD 186

Query: 273 LMPSRDLVDWTMMVSGHVNVGNLESAKRFFDDAPDKDLLMYNIILGGHAKNEELEVLVRF 94
            MP++++V WT MV G+   G ++ A+  F+  P+K+ + +  ++  +  N   +  ++ 
Sbjct: 187 QMPAKNVVSWTTMVLGYARNGLIDQARSVFNQMPEKNTISWTAMMKSYVDNGRTDEALKL 246

Query: 93  FHEMPMRDLVSWNTVIGGLVRGKRINEAIK 4
           FHEMP R+L SWNT+I G + GKR+NEA K
Sbjct: 247 FHEMPQRNLYSWNTMISGCLDGKRVNEAFK 276



 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 45/141 (31%), Positives = 79/141 (56%)
 Frame = -1

Query: 453 DRDVFVATRLIEMYGEKGDVCHAGRVFDALVVKDKIVWTTMLEQYVIKCGDMEKACELFD 274
           D +VF  T LI  Y   G V  A ++FD +  K+ + WTTM+  Y  + G +++A  +F+
Sbjct: 159 DTNVFSWTSLISGYFRDGQVAKACQLFDQMPAKNVVSWTTMVLGYA-RNGLIDQARSVFN 217

Query: 273 LMPSRDLVDWTMMVSGHVNVGNLESAKRFFDDAPDKDLLMYNIILGGHAKNEELEVLVRF 94
            MP ++ + WT M+  +V+ G  + A + F + P ++L  +N ++ G    + +    + 
Sbjct: 218 QMPEKNTISWTAMMKSYVDNGRTDEALKLFHEMPQRNLYSWNTMISGCLDGKRVNEAFKL 277

Query: 93  FHEMPMRDLVSWNTVIGGLVR 31
           FH MP+R+ VSW  ++ GL R
Sbjct: 278 FHLMPLRNAVSWTIMVSGLAR 298



 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 41/146 (28%), Positives = 81/146 (55%)
 Frame = -1

Query: 447 DVFVATRLIEMYGEKGDVCHAGRVFDALVVKDKIVWTTMLEQYVIKCGDMEKACELFDLM 268
           D++     I   G  G+V  A ++FD +   D + +T M+  Y +K  ++ KA +LF  M
Sbjct: 68  DIYNCNIKISQLGRCGNVRGARKLFDEMPHHDNVSYTAMITAY-LKNNELRKAEKLFQTM 126

Query: 267 PSRDLVDWTMMVSGHVNVGNLESAKRFFDDAPDKDLLMYNIILGGHAKNEELEVLVRFFH 88
           P R +V  + M+ G+   G ++SA++ FD   D ++  +  ++ G+ ++ ++    + F 
Sbjct: 127 PDRTIVAESAMIDGYAKAGLMDSAQKVFDAMIDTNVFSWTSLISGYFRDGQVAKACQLFD 186

Query: 87  EMPMRDLVSWNTVIGGLVRGKRINEA 10
           +MP +++VSW T++ G  R   I++A
Sbjct: 187 QMPAKNVVSWTTMVLGYARNGLIDQA 212



 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 44/147 (29%), Positives = 77/147 (52%), Gaps = 3/147 (2%)
 Frame = -1

Query: 432 TRLIEMYGEKGDVCHAGRVFDALVVKDKIVWTTMLEQYVIKCGD---MEKACELFDLMPS 262
           T +++ Y + G    A ++F  +  ++   W TM+      C D   + +A +LF LMP 
Sbjct: 228 TAMMKSYVDNGRTDEALKLFHEMPQRNLYSWNTMISG----CLDGKRVNEAFKLFHLMPL 283

Query: 261 RDLVDWTMMVSGHVNVGNLESAKRFFDDAPDKDLLMYNIILGGHAKNEELEVLVRFFHEM 82
           R+ V WT+MVSG    G  + A+ +FD  P+KD+  +N ++  +     +      F+ M
Sbjct: 284 RNAVSWTIMVSGLARNGFTKLAREYFDQMPNKDIAAWNAMITAYVDECLIVEASELFNLM 343

Query: 81  PMRDLVSWNTVIGGLVRGKRINEAIKY 1
             R++V+WN +I G  R +   EA+K+
Sbjct: 344 TERNIVTWNAMIDGYARHRPDGEAMKH 370