BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00040628
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...   101   7e-20
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   100   1e-19
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,...    99   3e-19
gb|ABD96942.1| hypothetical protein [Cleome spinosa]                   97   1e-18
emb|CAD22562.1| reverse transcriptase [Brassica rapa subsp. olei...    97   2e-18

>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score =  101 bits (251), Expect = 7e-20
 Identities = 46/96 (47%), Positives = 69/96 (71%)
 Frame = -3

Query: 288 FRPIGLTNVLYKVITKILSRRLSTFLPKLIDKAQGAFVQGRNIMDNIWVA*ELVRGYNRT 109
           +RPI   + LYK+I+KIL++RL   + +++D AQ  F+  R+I DNI +A EL+RGYNR 
Sbjct: 517 YRPIACCSTLYKIISKILTKRLQAVITEVVDCAQTGFIPERHIGDNILLATELIRGYNRR 576

Query: 108 RCTPSCMLMLDIRKAFDTVSWNFLEAVLKGYGLPEI 1
             +P C++ +DIRKA+D+V W FLE++LK  G P +
Sbjct: 577 HVSPRCVIKVDIRKAYDSVEWVFLESMLKELGFPSM 612


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  100 bits (250), Expect = 1e-19
 Identities = 43/94 (45%), Positives = 68/94 (72%)
 Frame = -3

Query: 288 FRPIGLTNVLYKVITKILSRRLSTFLPKLIDKAQGAFVQGRNIMDNIWVA*ELVRGYNRT 109
           FRPI    V+YK+I+K+L+ R+   + +++++AQ  F+ GR+I DNI +A EL+RGY R 
Sbjct: 514 FRPIACCTVIYKIISKMLTNRMKGIIGEVVNEAQSGFIPGRHIADNILLASELIRGYTRK 573

Query: 108 RCTPSCMLMLDIRKAFDTVSWNFLEAVLKGYGLP 7
             +P C++ +DIRKA+D+V W+FLE +L  +G P
Sbjct: 574 HMSPRCIMKVDIRKAYDSVEWSFLETLLYEFGFP 607


>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
           [Arabidopsis thaliana]
          Length = 1164

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 46/95 (48%), Positives = 65/95 (68%)
 Frame = -3

Query: 288 FRPIGLTNVLYKVITKILSRRLSTFLPKLIDKAQGAFVQGRNIMDNIWVA*ELVRGYNRT 109
           FRPI   N +YKVI+K+L+ RL  FLP  I  +Q AF+ GR  ++N+ +A ELV GYN+ 
Sbjct: 420 FRPISCLNTVYKVISKLLTDRLKDFLPAAISHSQSAFMPGRLFLENVLLATELVHGYNKK 479

Query: 108 RCTPSCMLMLDIRKAFDTVSWNFLEAVLKGYGLPE 4
              PS ML +D+RKAFD+V W+F+ + L+   +PE
Sbjct: 480 NIAPSSMLKVDLRKAFDSVRWDFIVSALRALNVPE 514


>gb|ABD96942.1| hypothetical protein [Cleome spinosa]
          Length = 402

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 48/94 (51%), Positives = 65/94 (69%)
 Frame = -3

Query: 288 FRPIGLTNVLYKVITKILSRRLSTFLPKLIDKAQGAFVQGRNIMDNIWVA*ELVRGYNRT 109
           FRPI   N LYKVI+KI++ RL   LP LI   Q AF +GR++ D+I +A ELV+ YNR 
Sbjct: 33  FRPISCCNFLYKVISKIIANRLQLLLPWLISGNQAAFQKGRSMGDHIMLAAELVKDYNRP 92

Query: 108 RCTPSCMLMLDIRKAFDTVSWNFLEAVLKGYGLP 7
              PS ML +DI+KAFD++SW+F+  +L+   LP
Sbjct: 93  SAEPSAMLKIDIKKAFDSISWDFILDILRALDLP 126


>emb|CAD22562.1| reverse transcriptase [Brassica rapa subsp. oleifera]
          Length = 137

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 44/96 (45%), Positives = 66/96 (68%)
 Frame = -3

Query: 288 FRPIGLTNVLYKVITKILSRRLSTFLPKLIDKAQGAFVQGRNIMDNIWVA*ELVRGYNRT 109
           FRPI   N++YKVI+KI++ RL   L   +   Q AF++GR++ +N+ +A EL+R YN++
Sbjct: 3   FRPISCCNIVYKVISKIIANRLKPILRDCVSPNQAAFLKGRSLGENVLLASELIRDYNKS 62

Query: 108 RCTPSCMLMLDIRKAFDTVSWNFLEAVLKGYGLPEI 1
            C  S ML +DIRKAFDTV W+F+  +L+  G P +
Sbjct: 63  SCLRSSMLKVDIRKAFDTVCWDFVIKILRAQGFPPL 98