BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00040614
         (1056 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal...    99   1e-18
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...    96   1e-17
gb|AAD24652.1| putative non-LTR retroelement reverse transcripta...    94   4e-17
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                 93   1e-16
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]                92   2e-16

>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|7267919|emb|CAB78261.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 662

 Score = 99.4 bits (246), Expect = 1e-18
 Identities = 50/140 (35%), Positives = 77/140 (55%)
 Frame = -3

Query: 1048 LPVCVVKTIEEMIRNFLWKGKA*GRYLPKVKWKNMVKSKQEGGLGVNGLREWNKVCMTSH 869
            LP   V+ I+++   FLW G        K+ W+ + + K+EGGLG+  ++E N VC    
Sbjct: 349  LPRECVREIDKLCSAFLWSGPELSTNKAKIAWETVCRPKREGGLGLQSIKEANDVCCLKL 408

Query: 868  IWDICNMKQS*WVK*IATFKL*GESIWSVVARSTDSCIWRQMLKCKEEIKRHIVVRVRNG 689
            IW I +   S WV+ I T+ L   + WS  + S  S +W+++LK ++  K    V +RNG
Sbjct: 409  IWRIVSQGDSLWVQWIRTYLLKRNTFWSFRSASQGSWMWKKLLKYRDTAKAFSKVDIRNG 468

Query: 688  KEEKFMSDQWHHRGRLIEVL 629
            +   F  D W  +GRLI+VL
Sbjct: 469  ETASFWYDDWSSKGRLIDVL 488


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score = 96.3 bits (238), Expect = 1e-17
 Identities = 52/146 (35%), Positives = 76/146 (52%), Gaps = 1/146 (0%)
 Frame = -3

Query: 1048 LPVCVVKTIEEMIRNFLWKGKA*GRYLPKVKWKNMVKSKQEGGLGVNGLREWNKVCMTSH 869
            LP   ++ IE++   FLW G        K+ W ++ + K+EGGLG+  L E NKV     
Sbjct: 1128 LPAGCIREIEKLCSAFLWSGPVLNPKKAKIAWSSICQPKKEGGLGIKSLAEANKVSCLKL 1187

Query: 868  IWDICNMKQS*WVK*IATFKL*GESIWSVVARST-DSCIWRQMLKCKEEIKRHIVVRVRN 692
            IW + + + S WV  I TF +   + WS   RS+  S +W+++LK +E  K    V VRN
Sbjct: 1188 IWRLLSTQPSLWVTWIWTFIIRKGTFWSANERSSLGSWMWKKLLKYRELAKSMHKVEVRN 1247

Query: 691  GKEEKFMSDQWHHRGRLIEVLSAEAV 614
            G    F  D W H GRL+++     V
Sbjct: 1248 GSSTSFWYDHWSHLGRLLDITGTRRV 1273


>gb|AAD24652.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 977

 Score = 94.4 bits (233), Expect = 4e-17
 Identities = 49/139 (35%), Positives = 75/139 (53%), Gaps = 1/139 (0%)
 Frame = -3

Query: 1048 LPVCVVKTIEEMIRNFLWKGKA*GRYLPKVKWKNMVKSKQEGGLGVNGLREWNKVCMTSH 869
            LP   ++ I+++  +FLW G+       KV W ++ K K+EGGLG+  L+E N VC    
Sbjct: 788  LPRECIRDIDKLCSSFLWSGQDLNPRKAKVSWDDVCKPKKEGGLGLRSLKEANDVCCLKV 847

Query: 868  IWDICNMKQS*WVK*IATFKL*GESIWSVVARST-DSCIWRQMLKCKEEIKRHIVVRVRN 692
            +W I +   S WVK I  F L  E+ W V   +T  S +WR+++K +E+ K    V V  
Sbjct: 848  VWKIVSHGNSLWVKWIEKFLLKNETFWFVKENTTLGSWMWRKLIKFREKAKNFCKVEVNK 907

Query: 691  GKEEKFMSDQWHHRGRLIE 635
            G    F  D W + G+++E
Sbjct: 908  GNCTSFWYDDWSNMGQMVE 926


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 49/143 (34%), Positives = 76/143 (53%), Gaps = 1/143 (0%)
 Frame = -3

Query: 1048 LPVCVVKTIEEMIRNFLWKGKA*GRYLPKVKWKNMVKSKQEGGLGVNGLREWNKVCMTSH 869
            LP   +K IE++   FLW G        K+ W ++ K KQEGGLG+  L E NKV     
Sbjct: 404  LPAGCIKEIEKLCSAFLWSGPELNPKKAKITWTSLCKLKQEGGLGIKSLLEANKVSCLKL 463

Query: 868  IWDICNMKQS*WVK*IATFKL*GESIWSVVARST-DSCIWRQMLKCKEEIKRHIVVRVRN 692
            IW + + + S WV  + T+ +   S WS   RS+  S +W+++LK ++  K    V +++
Sbjct: 464  IWRLVSRQSSLWVNWVWTYIIRKGSFWSANDRSSLGSWMWKKLLKYRDVAKSMCKVEIKS 523

Query: 691  GKEEKFMSDQWHHRGRLIEVLSA 623
            G    F  D W   G+L++V +A
Sbjct: 524  GSSTSFWYDNWSQLGQLVDVTNA 546


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score = 92.4 bits (228), Expect = 2e-16
 Identities = 49/141 (34%), Positives = 75/141 (53%), Gaps = 1/141 (0%)
 Frame = -3

Query: 1048 LPVCVVKTIEEMIRNFLWKGKA*GRYLPKVKWKNMVKSKQEGGLGVNGLREWNKVCMTSH 869
            LP   ++ I+++  +FLW G     +  K+ W  + K K EGGLG+  L+E N V     
Sbjct: 478  LPRQCIREIDKLCSSFLWSGSEMSSHKAKISWDIVCKPKAEGGLGLRNLKEANDVSCLKL 537

Query: 868  IWDICNMKQS*WVK*IATFKL*GESIWSV-VARSTDSCIWRQMLKCKEEIKRHIVVRVRN 692
            +W I +   S W K +A + +  +SIWS+  + S  S IWR++LK ++  K    V V N
Sbjct: 538  VWRIISNSNSLWTKWVAEYLIRKKSIWSLKQSTSMGSWIWRKILKIRDVAKSFSRVEVGN 597

Query: 691  GKEEKFMSDQWHHRGRLIEVL 629
            G+   F  D W   GRLI+ +
Sbjct: 598  GESASFWYDHWSAHGRLIDTV 618