BLASTX nr result

ID: Lithospermum22_contig00040602 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00040602
         (449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003627081.1| Protein CHUP1 [Medicago truncatula] gi|35552...    60   2e-07
ref|XP_002283384.1| PREDICTED: protein CHUP1, chloroplastic [Vit...    56   3e-06
emb|CAN65532.1| hypothetical protein VITISV_039631 [Vitis vinifera]    55   5e-06

>ref|XP_003627081.1| Protein CHUP1 [Medicago truncatula] gi|355521103|gb|AET01557.1|
           Protein CHUP1 [Medicago truncatula]
          Length = 594

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 56/150 (37%), Positives = 76/150 (50%), Gaps = 9/150 (6%)
 Frame = -1

Query: 443 QTKSKGFSKLMRLLQGKDSNIHY--QVPSGERTTYIEDMVGKCPGDSPGCHSGFSTVTGA 270
           + KSK F KLM+L++GKDS+ H    V S E++   ED +      + G  S + T+T  
Sbjct: 453 KNKSKIFGKLMKLIRGKDSSNHLSGSVTSVEKSRSREDSI------NDGLKSEYETLTDM 506

Query: 269 NGTITRSTSRGSRYSL--DLQRTSDEGSLCIFRSIDSILEDNTIPMQPDKLAHASENVEK 96
           +     S    S  SL  + +R SD GSL  F    S+  D     Q    ++AS   EK
Sbjct: 507 S---QNSIDLNSTLSLKEETRRNSDVGSLKNFGRRKSVAGDLKFITQSFSDSYAS---EK 560

Query: 95  SELVKYAEALKASRN-----KPLKRRTASS 21
           S L+KYAEALK S +     KPL  R +SS
Sbjct: 561 SNLIKYAEALKDSTSSETPPKPLLNRRSSS 590


>ref|XP_002283384.1| PREDICTED: protein CHUP1, chloroplastic [Vitis vinifera]
           gi|297743166|emb|CBI36033.3| unnamed protein product
           [Vitis vinifera]
          Length = 636

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 52/161 (32%), Positives = 71/161 (44%), Gaps = 23/161 (14%)
 Frame = -1

Query: 437 KSKGFSKLMRLLQGKDSNIHYQVPSGERTTYIEDMVGKCPGDSPGCHSGFST-----VTG 273
           K+K  SKL RL++GKD + H QV + +++   E M+  C  DS  C+S + T       G
Sbjct: 479 KTKFLSKLRRLIRGKDHHHHDQVSTADKSASPE-MLPTCSDDSLHCNSAYPTGIDAKTAG 537

Query: 272 ANGTITRSTSRGSRYSLDLQRT-----------------SDEGSLCIFRSIDSILEDNTI 144
            +   T       R+SLD+QR                  SD G    ++ I  IL    +
Sbjct: 538 NSNRFTALPPSSFRHSLDIQRLKSLNVEDFKELERARRYSDTGHFNAYKRI--ILGGEAV 595

Query: 143 PMQPDKLAHASENVEKSELVKYAEALKASR-NKPLKRRTAS 24
              P    H      KS LVKYAEAL  S   KP  R++ S
Sbjct: 596 NDSPVDANH------KSSLVKYAEALSHSHGGKPSHRKSKS 630


>emb|CAN65532.1| hypothetical protein VITISV_039631 [Vitis vinifera]
          Length = 636

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 52/161 (32%), Positives = 70/161 (43%), Gaps = 23/161 (14%)
 Frame = -1

Query: 437 KSKGFSKLMRLLQGKDSNIHYQVPSGERTTYIEDMVGKCPGDSPGCHSGFST-----VTG 273
           K+K  SKL RL++GKD + H QV + ++    E M+  C  DS  C+S + T       G
Sbjct: 479 KTKFLSKLRRLIRGKDHHHHDQVSTADKAASPE-MLPTCSDDSLHCNSAYPTGIDAKTAG 537

Query: 272 ANGTITRSTSRGSRYSLDLQRT-----------------SDEGSLCIFRSIDSILEDNTI 144
            +   T       R+SLD+QR                  SD G    ++ I  IL    +
Sbjct: 538 NSNRFTALPPSSFRHSLDIQRLKSLNVEDFKELERARRYSDTGHFNAYKRI--ILGGEAV 595

Query: 143 PMQPDKLAHASENVEKSELVKYAEALKASR-NKPLKRRTAS 24
              P    H      KS LVKYAEAL  S   KP  R++ S
Sbjct: 596 NDSPVDANH------KSSLVKYAEALSHSHGGKPSHRKSKS 630


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