BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00040588
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527345.1| pentatricopeptide repeat-containing protein,...   190   9e-47
ref|XP_002332220.1| predicted protein [Populus trichocarpa] gi|2...   188   4e-46
ref|XP_002283668.2| PREDICTED: pentatricopeptide repeat-containi...   184   6e-45
emb|CBI19307.3| unnamed protein product [Vitis vinifera]              183   1e-44
ref|XP_003518275.1| PREDICTED: pentatricopeptide repeat-containi...   180   9e-44

>ref|XP_002527345.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223533264|gb|EEF35017.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 687

 Score =  190 bits (483), Expect = 9e-47
 Identities = 86/137 (62%), Positives = 112/137 (81%)
 Frame = +2

Query: 11  ARKVFDNLAERNVVTWTSLMHGYVHNKQPDVAFDVFREMLEFGSYPNNYTLGLVLNACSS 190
           ARK+FD+L  RNVV WT+LM GYV N QP++A DVF++MLE G+ P+NYTLG+ LNACS+
Sbjct: 128 ARKIFDSLHRRNVVAWTALMTGYVQNSQPNIAIDVFQDMLESGTLPSNYTLGIALNACSA 187

Query: 191 LGDVKLARQVHGYIIKYQIDHDTSIGNALCSLYSIHGNLDSAIKIFKRIKEKNVISWTAA 370
           +  +KL +Q+H ++IKY++D+D SIGNALCSLYS  G+LDS+I +F+ I EKNVISWTA 
Sbjct: 188 INSIKLGKQLHAFVIKYKLDYDPSIGNALCSLYSKLGSLDSSINVFQSIGEKNVISWTAV 247

Query: 371 ISACGDNGDSAEGLELF 421
           ISACG+NG +A GL  F
Sbjct: 248 ISACGENGKAAMGLRFF 264



 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 47/153 (30%), Positives = 75/153 (49%), Gaps = 13/153 (8%)
 Frame = +2

Query: 2   LDCARKVFDNLAERNVVTWTSLMHGYVHNKQPDVAFD-------------VFREMLEFGS 142
           +D A+ +F  +   N+VTW +++ G  H +  D+A D             +F E+   G 
Sbjct: 327 MDEAQILFHKMGSTNLVTWNAMISG--HAQAMDLAKDDFSAQRSGIEALSIFLELNRTGK 384

Query: 143 YPNNYTLGLVLNACSSLGDVKLARQVHGYIIKYQIDHDTSIGNALCSLYSIHGNLDSAIK 322
            P+ +TL  VL  CS L  +    Q+H   IK     D  +G AL ++YS  G++  A K
Sbjct: 385 KPDLFTLSSVLTVCSRLSALGQGEQLHAQTIKSGYLSDVVVGTALVNMYSKCGSIGKASK 444

Query: 323 IFKRIKEKNVISWTAAISACGDNGDSAEGLELF 421
            F  +  + +ISWT  I+    +G S + L+LF
Sbjct: 445 AFVEMSTRTLISWTTMITGLAQHGHSEQALQLF 477



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 42/135 (31%), Positives = 69/135 (51%)
 Frame = +2

Query: 2   LDCARKVFDNLAERNVVTWTSLMHGYVHNKQPDVAFDVFREMLEFGSYPNNYTLGLVLNA 181
           LD +  VF ++ E+NV++WT+++     N +  +    F EML     PN +TL  VL+ 
Sbjct: 226 LDSSINVFQSIGEKNVISWTAVISACGENGKAAMGLRFFNEMLLEDIKPNEFTLTTVLSL 285

Query: 182 CSSLGDVKLARQVHGYIIKYQIDHDTSIGNALCSLYSIHGNLDSAIKIFKRIKEKNVISW 361
           C     + L R VH   IK    ++  I N++  LY   G++D A  +F ++   N+++W
Sbjct: 286 CCVTLALVLGRLVHSLSIKLGYQYNLRITNSIMYLYLKCGHMDEAQILFHKMGSTNLVTW 345

Query: 362 TAAISACGDNGDSAE 406
            A IS      D A+
Sbjct: 346 NAMISGHAQAMDLAK 360


>ref|XP_002332220.1| predicted protein [Populus trichocarpa] gi|222831877|gb|EEE70354.1|
           predicted protein [Populus trichocarpa]
          Length = 673

 Score =  188 bits (477), Expect = 4e-46
 Identities = 88/139 (63%), Positives = 109/139 (78%)
 Frame = +2

Query: 11  ARKVFDNLAERNVVTWTSLMHGYVHNKQPDVAFDVFREMLEFGSYPNNYTLGLVLNACSS 190
           ARKVFDNL  RNVV WT+LM GYV N QP+VA +VF +MLE GS+P+N+TL + LNACSS
Sbjct: 34  ARKVFDNLPRRNVVVWTTLMTGYVQNSQPEVAVEVFGDMLESGSFPSNFTLSIALNACSS 93

Query: 191 LGDVKLARQVHGYIIKYQIDHDTSIGNALCSLYSIHGNLDSAIKIFKRIKEKNVISWTAA 370
           L  + L +Q H +IIKY+I HD+SIGNALCSLYS  G+LDS++K F+   EK+VISWT  
Sbjct: 94  LESITLGKQFHAFIIKYRISHDSSIGNALCSLYSKFGSLDSSVKAFRETGEKDVISWTTI 153

Query: 371 ISACGDNGDSAEGLELFVK 427
           ISACGDNG +  GL LF++
Sbjct: 154 ISACGDNGRAGMGLRLFIE 172



 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 44/135 (32%), Positives = 71/135 (52%)
 Frame = +2

Query: 2   LDCARKVFDNLAERNVVTWTSLMHGYVHNKQPDVAFDVFREMLEFGSYPNNYTLGLVLNA 181
           LD + K F    E++V++WT+++     N +  +   +F EML     PN++TL  VL+ 
Sbjct: 132 LDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPNDFTLTSVLSL 191

Query: 182 CSSLGDVKLARQVHGYIIKYQIDHDTSIGNALCSLYSIHGNLDSAIKIFKRIKEKNVISW 361
           CS++    L  QVH    K   + +  I N+L  LY   G +D A  +F R++ KN+I+W
Sbjct: 192 CSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFNRMEYKNLITW 251

Query: 362 TAAISACGDNGDSAE 406
            A I+      D A+
Sbjct: 252 NAMIAGHAQAMDLAK 266



 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 43/153 (28%), Positives = 77/153 (50%), Gaps = 13/153 (8%)
 Frame = +2

Query: 2   LDCARKVFDNLAERNVVTWTSLMHGYVHNKQPDVAFDVFR-------------EMLEFGS 142
           +D A+ +F+ +  +N++TW +++ G  H +  D+A D F              ++   G 
Sbjct: 233 IDEAKNLFNRMEYKNLITWNAMIAG--HAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGR 290

Query: 143 YPNNYTLGLVLNACSSLGDVKLARQVHGYIIKYQIDHDTSIGNALCSLYSIHGNLDSAIK 322
            P+ +TL  +L  CS L  ++   Q+H   IK     D  +G AL  +Y   G+++ A K
Sbjct: 291 KPDLFTLSSILTVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARK 350

Query: 323 IFKRIKEKNVISWTAAISACGDNGDSAEGLELF 421
            F  +  + +ISWT+ I++   +G S   L+LF
Sbjct: 351 AFLDMSTRTLISWTSMITSFARHGQSQHALQLF 383



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 2/138 (1%)
 Frame = +2

Query: 2   LDCARKVFDNLAERNVVTWTSLMHGYVHNKQPDVAFDVFREMLEFGSYPNNYTLGLVLNA 181
           ++ ARK F +++ R +++WTS++  +  + Q   A  +F +M   G  PN  T   VL A
Sbjct: 345 IERARKAFLDMSTRTLISWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAA 404

Query: 182 CSSLGDVKLARQVHGYIIK-YQIDHDTSIGNALCSLYSIHGNLDSAIKIFKRIK-EKNVI 355
           CS  G V  A +    + K Y+I         L  ++   G LD A  + KR+  E N  
Sbjct: 405 CSHAGMVDEALEYFEIMQKEYKIKPVMDHYGCLVDMFVRLGRLDEAFDVIKRMDVEPNEF 464

Query: 356 SWTAAISACGDNGDSAEG 409
            W   I+ C ++G+   G
Sbjct: 465 IWLLLIAGCRNHGNEELG 482


>ref|XP_002283668.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 762

 Score =  184 bits (467), Expect = 6e-45
 Identities = 86/142 (60%), Positives = 112/142 (78%)
 Frame = +2

Query: 2   LDCARKVFDNLAERNVVTWTSLMHGYVHNKQPDVAFDVFREMLEFGSYPNNYTLGLVLNA 181
           ++ ARKVFD L  RNVV+WT+LM GYVH+ +P++A  VFREMLE G+YP NYTLG  L+A
Sbjct: 120 METARKVFDELPRRNVVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTNYTLGTALSA 179

Query: 182 CSSLGDVKLARQVHGYIIKYQIDHDTSIGNALCSLYSIHGNLDSAIKIFKRIKEKNVISW 361
            S L   +L +Q+HGY IKY+I+ D SIGN+LCSLYS  G+L+ A+K F+RI++KNVISW
Sbjct: 180 SSDLHSKELGKQIHGYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFRRIRDKNVISW 239

Query: 362 TAAISACGDNGDSAEGLELFVK 427
           T  ISA GDNG++A GL+ FV+
Sbjct: 240 TTVISAWGDNGEAATGLQFFVE 261



 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 46/150 (30%), Positives = 76/150 (50%), Gaps = 13/150 (8%)
 Frame = +2

Query: 11  ARKVFDNLAERNVVTWTSLMHGYVHNKQPDVAFD-------------VFREMLEFGSYPN 151
           A+K+FD +   ++VTW +++ G  H +  D A D             +F ++   G  P+
Sbjct: 325 AKKLFDEMETISLVTWNAMIAG--HARMMDFAKDDLAAHQCGTEALSIFLKLNRSGMKPD 382

Query: 152 NYTLGLVLNACSSLGDVKLARQVHGYIIKYQIDHDTSIGNALCSLYSIHGNLDSAIKIFK 331
            +T   VL+ CSSL  ++   QVH   IK     D  +G AL ++Y+  G+++ A K F 
Sbjct: 383 LFTFSSVLSVCSSLVALEQGEQVHAQTIKTGFLSDVVVGTALVNMYNKCGSIERASKAFV 442

Query: 332 RIKEKNVISWTAAISACGDNGDSAEGLELF 421
            +  + +ISWT+ I+    NG   + L LF
Sbjct: 443 EMSIRTLISWTSMITGYAQNGQPQQALLLF 472



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 35/125 (28%), Positives = 65/125 (52%)
 Frame = +2

Query: 2   LDCARKVFDNLAERNVVTWTSLMHGYVHNKQPDVAFDVFREMLEFGSYPNNYTLGLVLNA 181
           L+CA K F  + ++NV++WT+++  +  N +       F EML     PN +TL   L+ 
Sbjct: 221 LECAVKAFRRIRDKNVISWTTVISAWGDNGEAATGLQFFVEMLSECVEPNEFTLTSALSL 280

Query: 182 CSSLGDVKLARQVHGYIIKYQIDHDTSIGNALCSLYSIHGNLDSAIKIFKRIKEKNVISW 361
           C  +  + +  Q+H   IK   + +  I N++  LY   G +  A K+F  ++  ++++W
Sbjct: 281 CCVMQSLDIGTQIHSLTIKLGFESNLPIKNSIMYLYLKCGWIHEAKKLFDEMETISLVTW 340

Query: 362 TAAIS 376
            A I+
Sbjct: 341 NAMIA 345



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 43/137 (31%), Positives = 62/137 (45%), Gaps = 6/137 (4%)
 Frame = +2

Query: 2   LDCARKVFDNLAERNVVTWTSLMHGYVHNKQPDVAFDVFREMLEFGSYPNNYTLGLVLNA 181
           ++ A K F  ++ R +++WTS++ GY  N QP  A  +F +M   G  PN  T   VL+A
Sbjct: 434 IERASKAFVEMSIRTLISWTSMITGYAQNGQPQQALLLFEDMRLAGVRPNKITFVGVLSA 493

Query: 182 CSSLGDVKLA-----RQVHGYIIKYQIDHDTSIGNALCSLYSIHGNLDSAIKIFKRIK-E 343
           CS  G V  A        + Y I   +DH       L  ++   G LD A    K +  E
Sbjct: 494 CSHAGMVDEALDYFQMMKNEYKITPVMDHYA----CLIDMFVRLGRLDEAFDFIKEMDLE 549

Query: 344 KNVISWTAAISACGDNG 394
            N   W+  I+ C   G
Sbjct: 550 PNEFIWSILIAGCRSQG 566


>emb|CBI19307.3| unnamed protein product [Vitis vinifera]
          Length = 683

 Score =  183 bits (464), Expect = 1e-44
 Identities = 86/139 (61%), Positives = 110/139 (79%)
 Frame = +2

Query: 11  ARKVFDNLAERNVVTWTSLMHGYVHNKQPDVAFDVFREMLEFGSYPNNYTLGLVLNACSS 190
           ARKVFD L  RNVV+WT+LM GYVH+ +P++A  VFREMLE G+YP NYTLG  L+A S 
Sbjct: 86  ARKVFDELPRRNVVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTNYTLGTALSASSD 145

Query: 191 LGDVKLARQVHGYIIKYQIDHDTSIGNALCSLYSIHGNLDSAIKIFKRIKEKNVISWTAA 370
           L   +L +Q+HGY IKY+I+ D SIGN+LCSLYS  G+L+ A+K F+RI++KNVISWT  
Sbjct: 146 LHSKELGKQIHGYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFRRIRDKNVISWTTV 205

Query: 371 ISACGDNGDSAEGLELFVK 427
           ISA GDNG++A GL+ FV+
Sbjct: 206 ISAWGDNGEAATGLQFFVE 224



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 35/125 (28%), Positives = 65/125 (52%)
 Frame = +2

Query: 2   LDCARKVFDNLAERNVVTWTSLMHGYVHNKQPDVAFDVFREMLEFGSYPNNYTLGLVLNA 181
           L+CA K F  + ++NV++WT+++  +  N +       F EML     PN +TL   L+ 
Sbjct: 184 LECAVKAFRRIRDKNVISWTTVISAWGDNGEAATGLQFFVEMLSECVEPNEFTLTSALSL 243

Query: 182 CSSLGDVKLARQVHGYIIKYQIDHDTSIGNALCSLYSIHGNLDSAIKIFKRIKEKNVISW 361
           C  +  + +  Q+H   IK   + +  I N++  LY   G +  A K+F  ++  ++++W
Sbjct: 244 CCVMQSLDIGTQIHSLTIKLGFESNLPIKNSIMYLYLKCGWIHEAKKLFDEMETISLVTW 303

Query: 362 TAAIS 376
            A I+
Sbjct: 304 NAMIA 308


>ref|XP_003518275.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 754

 Score =  180 bits (457), Expect = 9e-44
 Identities = 87/142 (61%), Positives = 108/142 (76%)
 Frame = +2

Query: 2   LDCARKVFDNLAERNVVTWTSLMHGYVHNKQPDVAFDVFREMLEFGSYPNNYTLGLVLNA 181
           ++ AR+VF+N+  RNVV WT+LM G+V N QP  A  VF+EML  GSYP+ YTL  VL+A
Sbjct: 115 MEDARRVFENMPRRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSIYTLSAVLHA 174

Query: 182 CSSLGDVKLARQVHGYIIKYQIDHDTSIGNALCSLYSIHGNLDSAIKIFKRIKEKNVISW 361
           CSSL  +KL  Q H YIIKY +D DTS+G+ALCSLYS  G L+ A+K F RI+EKNVISW
Sbjct: 175 CSSLQSLKLGDQFHAYIIKYHLDFDTSVGSALCSLYSKCGRLEDALKAFSRIREKNVISW 234

Query: 362 TAAISACGDNGDSAEGLELFVK 427
           T+A+SACGDNG   +GL LFV+
Sbjct: 235 TSAVSACGDNGAPVKGLRLFVE 256



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 37/125 (29%), Positives = 64/125 (51%)
 Frame = +2

Query: 2   LDCARKVFDNLAERNVVTWTSLMHGYVHNKQPDVAFDVFREMLEFGSYPNNYTLGLVLNA 181
           L+ A K F  + E+NV++WTS +     N  P     +F EM+     PN +TL   L+ 
Sbjct: 216 LEDALKAFSRIREKNVISWTSAVSACGDNGAPVKGLRLFVEMISEDIKPNEFTLTSALSQ 275

Query: 182 CSSLGDVKLARQVHGYIIKYQIDHDTSIGNALCSLYSIHGNLDSAIKIFKRIKEKNVISW 361
           C  +  ++L  QV    IK+  + +  + N+L  LY   G +  A + F R+ + ++++W
Sbjct: 276 CCEIPSLELGTQVCSLCIKFGYESNLRVRNSLLYLYLKSGFIVEAHRFFNRMDDVSMVTW 335

Query: 362 TAAIS 376
            A I+
Sbjct: 336 NAMIA 340



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 36/148 (24%), Positives = 75/148 (50%), Gaps = 11/148 (7%)
 Frame = +2

Query: 11  ARKVFDNLAERNVVTWTSLMHGYVHN-----------KQPDVAFDVFREMLEFGSYPNNY 157
           A + F+ + + ++VTW +++ G+              ++   A  +F ++ + G  P+ +
Sbjct: 320 AHRFFNRMDDVSMVTWNAMIAGHAQMMELTKDNLSACQRGSEALKIFSKLNQSGMKPDLF 379

Query: 158 TLGLVLNACSSLGDVKLARQVHGYIIKYQIDHDTSIGNALCSLYSIHGNLDSAIKIFKRI 337
           TL  VL+ CS +  ++   Q+H   IK     D  +  +L S+Y+  G+++ A K F  +
Sbjct: 380 TLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYNKCGSIERASKAFLEM 439

Query: 338 KEKNVISWTAAISACGDNGDSAEGLELF 421
             + +I+WT+ I+    +G S + L +F
Sbjct: 440 STRTMIAWTSMITGFSQHGMSQQALHIF 467