BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00040566
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]    58   2e-08
dbj|BAD99221.1| polypepetide with reverse transcriptase and RNas...    57   3e-08
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t...    57   6e-08
gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsi...    59   7e-08
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi...    61   8e-08

>emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]
          Length = 1316

 Score = 58.2 bits (139), Expect(2) = 2e-08
 Identities = 28/51 (54%), Positives = 35/51 (68%)
 Frame = +1

Query: 82   IVLKGSSKLQLQAFSDSDWASCPTTRRSVPSYLITLGGSPIT*KGKKQITV 234
            IVLK  + LQL  +SDSDW SCP TRRS+    + LG SPI+ + KKQ T+
Sbjct: 1148 IVLKADNDLQLYCYSDSDWXSCPLTRRSISGCCVKLGTSPISWRCKKQGTI 1198



 Score = 25.0 bits (53), Expect(2) = 2e-08
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +2

Query: 2    FMQCPRESHLSTLHHRLHYVHQTANQ 79
            FMQ PRE HL   +  + Y+ +   Q
Sbjct: 1121 FMQSPREEHLDAAYRVVRYLKKGPGQ 1146


>dbj|BAD99221.1| polypepetide with reverse transcriptase and RNaseH domains [Petunia
           x hybrida]
          Length = 389

 Score = 57.0 bits (136), Expect(2) = 3e-08
 Identities = 25/53 (47%), Positives = 33/53 (62%)
 Frame = +1

Query: 82  IVLKGSSKLQLQAFSDSDWASCPTTRRSVPSYLITLGGSPIT*KGKKQITVFL 240
           I L      QL  F D+DWASCP +RRS+  + +T+GG P++ K KKQ  V L
Sbjct: 218 IFLSSEQSFQLTGFCDADWASCPDSRRSISGFFLTMGGCPLSWKSKKQQVVSL 270



 Score = 25.8 bits (55), Expect(2) = 3e-08
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 5   MQCPRESHLSTLHHRLHYV 61
           MQ PR  HL   +H L Y+
Sbjct: 192 MQSPRSGHLEAAYHTLRYI 210


>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1491

 Score = 57.4 bits (137), Expect(2) = 6e-08
 Identities = 27/51 (52%), Positives = 37/51 (72%)
 Frame = +1

Query: 82   IVLKGSSKLQLQAFSDSDWASCPTTRRSVPSYLITLGGSPIT*KGKKQITV 234
            I+L  +  L L+ + DSD+ SCP TRRS+ +Y++ LGGSPI+ K KKQ TV
Sbjct: 1323 ILLSSNKDLTLEVYCDSDFQSCPLTRRSLSAYVVLLGGSPISWKTKKQDTV 1373



 Score = 24.3 bits (51), Expect(2) = 6e-08
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +2

Query: 2    FMQCPRESHLSTLHHRLHYVHQTANQ 79
            FMQ PRE+HL      + Y+  +  Q
Sbjct: 1296 FMQAPREAHLEAAMRIVRYLKGSPGQ 1321


>gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1156

 Score = 58.5 bits (140), Expect(2) = 7e-08
 Identities = 27/51 (52%), Positives = 38/51 (74%)
 Frame = +1

Query: 82   IVLKGSSKLQLQAFSDSDWASCPTTRRSVPSYLITLGGSPIT*KGKKQITV 234
            I+L   ++LQL  + DSD+ +CP TRRS+ +Y++ LGGSPI+ K KKQ TV
Sbjct: 980  ILLNADTELQLDVYCDSDFQTCPKTRRSLSAYVVLLGGSPISWKTKKQDTV 1030



 Score = 22.7 bits (47), Expect(2) = 7e-08
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 2    FMQCPRESHLSTLHHRLHYVHQTANQ 79
            FMQ PRE+HL+     + ++  +  Q
Sbjct: 953  FMQTPREAHLAAAMRIVRFLKGSPGQ 978


>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1501

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 28/51 (54%), Positives = 36/51 (70%)
 Frame = +1

Query: 82   IVLKGSSKLQLQAFSDSDWASCPTTRRSVPSYLITLGGSPIT*KGKKQITV 234
            I+L     L L+ + DSDW SCP TRRS+ +Y++ LGGSPI+ K KKQ TV
Sbjct: 1333 ILLNADPDLTLEVYCDSDWQSCPLTRRSISAYVVLLGGSPISWKTKKQDTV 1383