BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00040560
         (500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002962388.1| hypothetical protein SELMODRAFT_78854 [Selag...    59   3e-07
ref|XP_002965606.1| hypothetical protein SELMODRAFT_84331 [Selag...    59   3e-07
ref|NP_187351.2| tRNA pseudouridine synthase A [Arabidopsis thal...    58   7e-07
dbj|BAF00823.1| putative tRNA pseudouridine synthase [Arabidopsi...    58   7e-07
ref|XP_003541334.1| PREDICTED: tRNA pseudouridine synthase A 1-l...    57   1e-06

>ref|XP_002962388.1| hypothetical protein SELMODRAFT_78854 [Selaginella
          moellendorffii] gi|300169249|gb|EFJ35851.1|
          hypothetical protein SELMODRAFT_78854 [Selaginella
          moellendorffii]
          Length = 268

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 22/30 (73%), Positives = 27/30 (90%)
 Frame = -3

Query: 90 KWRLVIAYDGARFSGWQYQPTLPTVQGIVE 1
          KWR+V++YDG RFSGWQYQP  PTVQG++E
Sbjct: 1  KWRIVVSYDGTRFSGWQYQPDFPTVQGLIE 30


>ref|XP_002965606.1| hypothetical protein SELMODRAFT_84331 [Selaginella
          moellendorffii] gi|300166420|gb|EFJ33026.1|
          hypothetical protein SELMODRAFT_84331 [Selaginella
          moellendorffii]
          Length = 269

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 22/30 (73%), Positives = 27/30 (90%)
 Frame = -3

Query: 90 KWRLVIAYDGARFSGWQYQPTLPTVQGIVE 1
          KWR+V++YDG RFSGWQYQP  PTVQG++E
Sbjct: 1  KWRIVVSYDGTRFSGWQYQPDFPTVQGLIE 30


>ref|NP_187351.2| tRNA pseudouridine synthase A [Arabidopsis thaliana]
           gi|119360081|gb|ABL66769.1| At3g06950 [Arabidopsis
           thaliana] gi|332640958|gb|AEE74479.1| tRNA pseudouridine
           synthase A [Arabidopsis thaliana]
          Length = 323

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 30/71 (42%), Positives = 39/71 (54%), Gaps = 6/71 (8%)
 Frame = -3

Query: 195 LQCFTP------FPLQVKSSIEGEHHPSCNGDMKTLMQPPYKWRLVIAYDGARFSGWQYQ 34
           + C TP      F     SS +     + N  +K      YKWRLVIAYDG RF+GWQYQ
Sbjct: 1   MSCVTPALPPSLFTNGYLSSPQNISMTNLNSSVKVSDSGAYKWRLVIAYDGTRFAGWQYQ 60

Query: 33  PTLPTVQGIVE 1
            + PT+Q ++E
Sbjct: 61  ESPPTIQSMLE 71


>dbj|BAF00823.1| putative tRNA pseudouridine synthase [Arabidopsis thaliana]
          Length = 323

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 30/71 (42%), Positives = 39/71 (54%), Gaps = 6/71 (8%)
 Frame = -3

Query: 195 LQCFTP------FPLQVKSSIEGEHHPSCNGDMKTLMQPPYKWRLVIAYDGARFSGWQYQ 34
           + C TP      F     SS +     + N  +K      YKWRLVIAYDG RF+GWQYQ
Sbjct: 1   MSCVTPALPPSLFTNGYLSSPQNISMTNLNSSVKVSGSGAYKWRLVIAYDGTRFAGWQYQ 60

Query: 33  PTLPTVQGIVE 1
            + PT+Q ++E
Sbjct: 61  ESPPTIQSMLE 71


>ref|XP_003541334.1| PREDICTED: tRNA pseudouridine synthase A 1-like [Glycine max]
          Length = 327

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 30/62 (48%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
 Frame = -3

Query: 183 TPFP-LQVKSSIEGEHHPSCNGDMKTLMQPPYKWRLVIAYDGARFSGWQYQPTLPTVQGI 7
           TP P L   + +E EH    +G    L+Q  YKWR+V+AYDG +++GWQYQ + PTVQ  
Sbjct: 16  TPIPFLNSTAPVELEHG---HGHGVKLIQDGYKWRIVLAYDGTQYAGWQYQESPPTVQCT 72

Query: 6   VE 1
           VE
Sbjct: 73  VE 74