BLASTX nr result

ID: Lithospermum22_contig00040492 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00040492
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73672.1| hypothetical protein VITISV_031859 [Vitis vinifera]   114   6e-24
ref|NP_190700.2| pentatricopeptide repeat-containing protein [Ar...   108   6e-22
emb|CAB62654.1| putative protein [Arabidopsis thaliana]               108   6e-22
ref|XP_002877796.1| binding protein [Arabidopsis lyrata subsp. l...   100   2e-19
ref|XP_002327644.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16

>emb|CAN73672.1| hypothetical protein VITISV_031859 [Vitis vinifera]
          Length = 901

 Score =  114 bits (286), Expect = 6e-24
 Identities = 52/103 (50%), Positives = 75/103 (72%)
 Frame = +1

Query: 1    DEDALPESSLFAGLFTSVRFQGSTYVGEKIAKELIEQDPLNFSYYELLVNVYAASERWEE 180
            DED   ESS +AGL +S RFQG  ++GE+IA  LIE +P N SYY LL+NVYA + RWE+
Sbjct: 789  DEDLSWESSFWAGLLSSCRFQGXVFLGERIATYLIESEPQNISYYRLLLNVYAVAGRWED 848

Query: 181  VTQTKDLMKSRGILKIPGCGLKNLEEVVHNTRVEEEWRSREDV 309
            V + K+++K RGI ++PGC L +L+E+VH  ++ E+W+   +V
Sbjct: 849  VARVKEMVKERGIKQMPGCNLADLKEIVHEFKLGEKWQQGMEV 891


>ref|NP_190700.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|122230198|sp|Q0WVU0.1|PP278_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g51320 gi|110741620|dbj|BAE98758.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332645257|gb|AEE78778.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 530

 Score =  108 bits (269), Expect = 6e-22
 Identities = 48/93 (51%), Positives = 69/93 (74%)
 Frame = +1

Query: 1   DEDALPESSLFAGLFTSVRFQGSTYVGEKIAKELIEQDPLNFSYYELLVNVYAASERWEE 180
           DED  PES+ +A L +S RF G+  +GE IAK LIE DPLN+ YY LL+N+Y+ + RWE+
Sbjct: 415 DEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYKYYHLLMNIYSVTGRWED 474

Query: 181 VTQTKDLMKSRGILKIPGCGLKNLEEVVHNTRV 279
           V + ++++K R I +IPGCGL +L+E+VH  R+
Sbjct: 475 VNRVREMVKERKIGRIPGCGLVDLKEIVHGLRL 507


>emb|CAB62654.1| putative protein [Arabidopsis thaliana]
          Length = 486

 Score =  108 bits (269), Expect = 6e-22
 Identities = 48/93 (51%), Positives = 69/93 (74%)
 Frame = +1

Query: 1   DEDALPESSLFAGLFTSVRFQGSTYVGEKIAKELIEQDPLNFSYYELLVNVYAASERWEE 180
           DED  PES+ +A L +S RF G+  +GE IAK LIE DPLN+ YY LL+N+Y+ + RWE+
Sbjct: 371 DEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYKYYHLLMNIYSVTGRWED 430

Query: 181 VTQTKDLMKSRGILKIPGCGLKNLEEVVHNTRV 279
           V + ++++K R I +IPGCGL +L+E+VH  R+
Sbjct: 431 VNRVREMVKERKIGRIPGCGLVDLKEIVHGLRL 463


>ref|XP_002877796.1| binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297323634|gb|EFH54055.1| binding protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 530

 Score =  100 bits (248), Expect = 2e-19
 Identities = 45/93 (48%), Positives = 67/93 (72%)
 Frame = +1

Query: 1   DEDALPESSLFAGLFTSVRFQGSTYVGEKIAKELIEQDPLNFSYYELLVNVYAASERWEE 180
           +ED  PES+ +A L +  RF  +  +GE IAK LIE DPLN+ YY LL+N+Y+ + RWE+
Sbjct: 415 EEDVTPESAKWANLLSWSRFTVNPALGESIAKSLIETDPLNYKYYHLLMNIYSVTGRWED 474

Query: 181 VTQTKDLMKSRGILKIPGCGLKNLEEVVHNTRV 279
           V + ++++K R I +IPGCGL +L+E+VH  R+
Sbjct: 475 VNRVREVVKERKIGRIPGCGLVDLKEIVHGLRL 507


>ref|XP_002327644.1| predicted protein [Populus trichocarpa] gi|222836729|gb|EEE75122.1|
           predicted protein [Populus trichocarpa]
          Length = 564

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 43/93 (46%), Positives = 62/93 (66%)
 Frame = +1

Query: 1   DEDALPESSLFAGLFTSVRFQGSTYVGEKIAKELIEQDPLNFSYYELLVNVYAASERWEE 180
           +ED   ES ++A L  S RFQG+  +GE+IA  LI+ +P N  +Y LL+NVYA   RW++
Sbjct: 453 EEDMPLESLVWANLLNSCRFQGNVALGERIANSLIDMEPWNILHYRLLLNVYAVGGRWDD 512

Query: 181 VTQTKDLMKSRGILKIPGCGLKNLEEVVHNTRV 279
           V   KDL+K++   + PGC L +L+E+VHN  V
Sbjct: 513 VAMVKDLVKTKMKGRTPGCNLVDLKEIVHNYEV 545


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