BLASTX nr result

ID: Lithospermum22_contig00040480 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00040480
         (212 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306546.1| predicted protein [Populus trichocarpa] gi|2...    85   5e-15
emb|CAN88855.1| D2/4-type cyclin [Populus trichocarpa]                 85   5e-15
emb|CAA09852.1| cyclin D2.1 protein [Nicotiana tabacum]                84   9e-15
ref|XP_003522757.1| PREDICTED: cyclin-D4-1-like [Glycine max]          84   2e-14
gb|ACU21437.1| unknown [Glycine max]                                   84   2e-14

>ref|XP_002306546.1| predicted protein [Populus trichocarpa] gi|222855995|gb|EEE93542.1|
           predicted protein [Populus trichocarpa]
          Length = 337

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 40/70 (57%), Positives = 56/70 (80%)
 Frame = +3

Query: 3   IQRMELMVLNALGWKLHACTPYTFIYHFLIKMVNDQLPLRPLIAKALQIIPSIIKGIEFL 182
           IQRMEL+VL+ L W++HA TP++FI +FL K++NDQ P R LI +++ +I S IKGI F+
Sbjct: 177 IQRMELLVLSTLDWRMHAITPFSFIDYFLGKIINDQTPPRSLILQSILLILSTIKGIYFM 236

Query: 183 DFKPCEIAAA 212
           +F+P EIAAA
Sbjct: 237 EFRPSEIAAA 246


>emb|CAN88855.1| D2/4-type cyclin [Populus trichocarpa]
          Length = 319

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 40/70 (57%), Positives = 56/70 (80%)
 Frame = +3

Query: 3   IQRMELMVLNALGWKLHACTPYTFIYHFLIKMVNDQLPLRPLIAKALQIIPSIIKGIEFL 182
           IQRMEL+VL+ L W++HA TP++FI +FL K++NDQ P R LI +++ +I S IKGI F+
Sbjct: 177 IQRMELLVLSTLDWRMHAITPFSFIDYFLGKIINDQTPPRSLILQSILLILSTIKGIYFM 236

Query: 183 DFKPCEIAAA 212
           +F+P EIAAA
Sbjct: 237 EFRPSEIAAA 246


>emb|CAA09852.1| cyclin D2.1 protein [Nicotiana tabacum]
          Length = 354

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 40/70 (57%), Positives = 56/70 (80%)
 Frame = +3

Query: 3   IQRMELMVLNALGWKLHACTPYTFIYHFLIKMVNDQLPLRPLIAKALQIIPSIIKGIEFL 182
           IQRMEL+VL+ L W++ A TPYTFI +F+ KM  DQ+P RPLI+ ++Q+I SII+ I+FL
Sbjct: 180 IQRMELLVLSTLKWRMQAYTPYTFIDYFMRKMNGDQIPSRPLISGSMQLILSIIRSIDFL 239

Query: 183 DFKPCEIAAA 212
           +F+  EIAA+
Sbjct: 240 EFRSSEIAAS 249


>ref|XP_003522757.1| PREDICTED: cyclin-D4-1-like [Glycine max]
          Length = 352

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 39/70 (55%), Positives = 55/70 (78%)
 Frame = +3

Query: 3   IQRMELMVLNALGWKLHACTPYTFIYHFLIKMVNDQLPLRPLIAKALQIIPSIIKGIEFL 182
           IQRMEL+VL+ L W++ A TP+TF+ +FL K+ +DQ PLR  I +++Q+I S  +GI+FL
Sbjct: 177 IQRMELLVLSTLKWRMQAITPFTFLDYFLCKINDDQSPLRSSIMRSIQLISSTARGIDFL 236

Query: 183 DFKPCEIAAA 212
           +FKP EIAAA
Sbjct: 237 EFKPSEIAAA 246


>gb|ACU21437.1| unknown [Glycine max]
          Length = 352

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 39/70 (55%), Positives = 55/70 (78%)
 Frame = +3

Query: 3   IQRMELMVLNALGWKLHACTPYTFIYHFLIKMVNDQLPLRPLIAKALQIIPSIIKGIEFL 182
           IQRMEL+VL+ L W++ A TP+TF+ +FL K+ +DQ PLR  I +++Q+I S  +GI+FL
Sbjct: 177 IQRMELLVLSTLKWRMQAITPFTFLDYFLCKINDDQSPLRSSIMRSIQLISSTARGIDFL 236

Query: 183 DFKPCEIAAA 212
           +FKP EIAAA
Sbjct: 237 EFKPSEIAAA 246


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