BLASTX nr result

ID: Lithospermum22_contig00040479 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00040479
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320719.1| predicted protein [Populus trichocarpa] gi|2...   160   1e-37
ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containi...   159   2e-37
gb|AEN99827.1| chlororespiratory reduction 4, partial [Aethionem...   154   7e-36
gb|AEN99841.1| chlororespiratory reduction 4, partial [Raphanus ...   153   2e-35
gb|AEN99831.1| chlororespiratory reduction 4 [Brassica rapa]          153   2e-35

>ref|XP_002320719.1| predicted protein [Populus trichocarpa] gi|222861492|gb|EEE99034.1|
           predicted protein [Populus trichocarpa]
          Length = 643

 Score =  160 bits (405), Expect = 1e-37
 Identities = 72/104 (69%), Positives = 91/104 (87%)
 Frame = -1

Query: 313 GKLGVSLIYMYAKCGSPDNAMSVFDDIKEKSVDHWNAMIGGLAVHGLGCLAFDLFMKMMR 134
           G+LGV+LI MY+KCGS +NAM VF++IKEKSVDHWNA+IGGLA+HGLG LAFD  M+M R
Sbjct: 391 GRLGVALIDMYSKCGSIENAMMVFENIKEKSVDHWNAIIGGLAIHGLGELAFDFLMEMER 450

Query: 133 QSIEPDGITYISVLNACAHSGMVKEGLICFEIMRRVHMLKPKLQ 2
             +EPD IT+I +LNAC H+G+VKEG++CFE+MRRVH ++PKLQ
Sbjct: 451 MRVEPDDITFIGLLNACGHAGLVKEGMMCFELMRRVHKVEPKLQ 494


>ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic-like [Vitis vinifera]
          Length = 635

 Score =  159 bits (402), Expect = 2e-37
 Identities = 72/103 (69%), Positives = 92/103 (89%)
 Frame = -1

Query: 310 KLGVSLIYMYAKCGSPDNAMSVFDDIKEKSVDHWNAMIGGLAVHGLGCLAFDLFMKMMRQ 131
           KLGV+LI MYAKCGS DNA+SVF+DI +KS+DHWNA+IGGLA+HGLG +AF+LFM+M + 
Sbjct: 387 KLGVALIDMYAKCGSIDNALSVFEDIDDKSIDHWNAIIGGLAIHGLGEVAFELFMEMEKL 446

Query: 130 SIEPDGITYISVLNACAHSGMVKEGLICFEIMRRVHMLKPKLQ 2
            ++PD IT+I VLNAC H+G+VKEGL+CFE+MRRVH ++PKLQ
Sbjct: 447 FVKPDDITFIGVLNACNHAGLVKEGLMCFELMRRVHKVEPKLQ 489


>gb|AEN99827.1| chlororespiratory reduction 4, partial [Aethionema grandiflorum]
          Length = 594

 Score =  154 bits (389), Expect = 7e-36
 Identities = 70/104 (67%), Positives = 91/104 (87%)
 Frame = -1

Query: 313 GKLGVSLIYMYAKCGSPDNAMSVFDDIKEKSVDHWNAMIGGLAVHGLGCLAFDLFMKMMR 134
           GKLGV+LI M++KCGS  +A+SVF+ I+ KS+DHWNAMIGGLA+HGLG LAFD+ M++ R
Sbjct: 365 GKLGVALIDMHSKCGSIQHAISVFEGIENKSIDHWNAMIGGLAIHGLGELAFDMLMQIER 424

Query: 133 QSIEPDGITYISVLNACAHSGMVKEGLICFEIMRRVHMLKPKLQ 2
            SI+PD IT+I VLNAC+HSG+VKEGL+CFE+MRR H ++P+LQ
Sbjct: 425 CSIQPDXITFIGVLNACSHSGLVKEGLLCFELMRRKHXIEPRLQ 468


>gb|AEN99841.1| chlororespiratory reduction 4, partial [Raphanus sativus]
          Length = 577

 Score =  153 bits (386), Expect = 2e-35
 Identities = 69/104 (66%), Positives = 90/104 (86%)
 Frame = -1

Query: 313 GKLGVSLIYMYAKCGSPDNAMSVFDDIKEKSVDHWNAMIGGLAVHGLGCLAFDLFMKMMR 134
           GKLGV+LI MY+KCGS  +AM VF+ I+ KS+DHWNAMIGGLAVHGLG  AFD+ +++ R
Sbjct: 357 GKLGVALIDMYSKCGSIQHAMRVFEGIESKSIDHWNAMIGGLAVHGLGESAFDMLLQIER 416

Query: 133 QSIEPDGITYISVLNACAHSGMVKEGLICFEIMRRVHMLKPKLQ 2
           +SI+PD IT++ VLNAC+HSG+VKEGL+CFE+MRR H ++P+LQ
Sbjct: 417 RSIKPDHITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQ 460


>gb|AEN99831.1| chlororespiratory reduction 4 [Brassica rapa]
          Length = 612

 Score =  153 bits (386), Expect = 2e-35
 Identities = 69/104 (66%), Positives = 90/104 (86%)
 Frame = -1

Query: 313 GKLGVSLIYMYAKCGSPDNAMSVFDDIKEKSVDHWNAMIGGLAVHGLGCLAFDLFMKMMR 134
           GKLGV+LI MY+KCGS  +AM VF+ I+ KS+DHWNAMIGGLAVHGLG  AFD+ +++ R
Sbjct: 392 GKLGVALIDMYSKCGSIQHAMRVFEGIESKSIDHWNAMIGGLAVHGLGESAFDMLLQIER 451

Query: 133 QSIEPDGITYISVLNACAHSGMVKEGLICFEIMRRVHMLKPKLQ 2
           +SI+PD IT++ VLNAC+HSG+VKEGL+CFE+MRR H ++P+LQ
Sbjct: 452 RSIKPDHITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQ 495


Top