BLASTX nr result

ID: Lithospermum22_contig00040450 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00040450
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containi...    67   2e-09
emb|CBI30601.3| unnamed protein product [Vitis vinifera]               67   2e-09
emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]    67   2e-09
ref|XP_002509440.1| pentatricopeptide repeat-containing protein,...    59   4e-07

>ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 933

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 33/49 (67%), Positives = 36/49 (73%)
 Frame = +1

Query: 220 TVSYSKLLSQLSQTKALLPGQQIHAHLFKVALDKDSKHRNHLINLYSKC 366
           +VSYSKLLSQ   TK+L PG QIHAH+ K  L  D   RNHLINLYSKC
Sbjct: 56  SVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKC 104


>emb|CBI30601.3| unnamed protein product [Vitis vinifera]
          Length = 501

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 33/49 (67%), Positives = 36/49 (73%)
 Frame = +1

Query: 220 TVSYSKLLSQLSQTKALLPGQQIHAHLFKVALDKDSKHRNHLINLYSKC 366
           +VSYSKLLSQ   TK+L PG QIHAH+ K  L  D   RNHLINLYSKC
Sbjct: 46  SVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKC 94


>emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
          Length = 906

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 33/49 (67%), Positives = 36/49 (73%)
 Frame = +1

Query: 220 TVSYSKLLSQLSQTKALLPGQQIHAHLFKVALDKDSKHRNHLINLYSKC 366
           +VSYSKLLSQ   TK+L PG QIHAH+ K  L  D   RNHLINLYSKC
Sbjct: 56  SVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKC 104


>ref|XP_002509440.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549339|gb|EEF50827.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 678

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/50 (54%), Positives = 37/50 (74%)
 Frame = +1

Query: 217 VTVSYSKLLSQLSQTKALLPGQQIHAHLFKVALDKDSKHRNHLINLYSKC 366
           +++SYS LL Q + +KA  PG++IHA + K+ L +D K RN LINLYSKC
Sbjct: 105 ISISYSNLLFQCTASKASTPGKEIHARVIKLGLSQDPKIRNLLINLYSKC 154


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