BLASTX nr result
ID: Lithospermum22_contig00040351
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00040351
(254 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002526753.1| pentatricopeptide repeat-containing protein,... 117 1e-24
ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago t... 115 3e-24
ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat... 115 4e-24
ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat... 114 1e-23
emb|CBI29893.3| unnamed protein product [Vitis vinifera] 114 1e-23
>ref|XP_002526753.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223533942|gb|EEF35667.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 818
Score = 117 bits (293), Expect = 1e-24
Identities = 58/82 (70%), Positives = 68/82 (82%)
Frame = +2
Query: 8 GRQIHSLLVKSPYEFHMYVGSSLLDMYSKAGQFHEAQCVFESLPERDVVSCTAIISGYAQ 187
GRQIHSL++K Y+ H++VGSSLLDMY+KAG+ EA+ VFESLPERDVVSCTAIISGYAQ
Sbjct: 595 GRQIHSLIIKCNYDSHIFVGSSLLDMYAKAGRILEARMVFESLPERDVVSCTAIISGYAQ 654
Query: 188 QGFGREALEVFRLLLREGMGVN 253
G EALE+FR L REG+ N
Sbjct: 655 LGLDEEALELFRRLEREGLSSN 676
Score = 74.3 bits (181), Expect = 1e-11
Identities = 31/77 (40%), Positives = 55/77 (71%)
Frame = +2
Query: 8 GRQIHSLLVKSPYEFHMYVGSSLLDMYSKAGQFHEAQCVFESLPERDVVSCTAIISGYAQ 187
G+Q+HS +++ F++ + +S++DMYSK G + A+ +F+S+PER V+S A++ GY +
Sbjct: 696 GKQVHSHVLRRELPFYVVLQNSMIDMYSKCGSLNYARRIFDSMPERTVISWNAMLVGYGK 755
Query: 188 QGFGREALEVFRLLLRE 238
G GRE +E+F+L+ E
Sbjct: 756 HGMGREVVELFKLMRTE 772
Score = 61.2 bits (147), Expect = 8e-08
Identities = 30/82 (36%), Positives = 54/82 (65%)
Frame = +2
Query: 8 GRQIHSLLVKSPYEFHMYVGSSLLDMYSKAGQFHEAQCVFESLPERDVVSCTAIISGYAQ 187
G+++H+ ++K+ Y +Y+ + L+ Y+K +A+ VF+ + ER+VVS TA+ISGY++
Sbjct: 494 GQRVHAHIIKTYYLPSVYLRTRLIVFYTKCDLLMDARHVFDEMSERNVVSWTAMISGYSR 553
Query: 188 QGFGREALEVFRLLLREGMGVN 253
+GF E L +F +LR + N
Sbjct: 554 RGFAFETLHLFVRMLRSDIEPN 575
>ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479421|gb|AES60624.1| Pentatricopeptide repeat
protein [Medicago truncatula]
Length = 840
Score = 115 bits (289), Expect = 3e-24
Identities = 58/82 (70%), Positives = 66/82 (80%)
Frame = +2
Query: 8 GRQIHSLLVKSPYEFHMYVGSSLLDMYSKAGQFHEAQCVFESLPERDVVSCTAIISGYAQ 187
GRQIHSL++K YE H++VGSSLLDMY+K G+ HEA+ VFE LPERDVVSCTAIISGYAQ
Sbjct: 384 GRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQ 443
Query: 188 QGFGREALEVFRLLLREGMGVN 253
G EALE+FR L EGM N
Sbjct: 444 LGLDEEALELFRRLQGEGMKSN 465
Score = 62.4 bits (150), Expect = 4e-08
Identities = 28/77 (36%), Positives = 52/77 (67%)
Frame = +2
Query: 8 GRQIHSLLVKSPYEFHMYVGSSLLDMYSKAGQFHEAQCVFESLPERDVVSCTAIISGYAQ 187
G+Q+H+ +++S + + +SL+DMYSK G ++ +F+++ ER V+S A++ GY++
Sbjct: 485 GKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSK 544
Query: 188 QGFGREALEVFRLLLRE 238
G GRE L++F L+ E
Sbjct: 545 HGEGREVLKLFTLMREE 561
Score = 60.5 bits (145), Expect = 1e-07
Identities = 26/71 (36%), Positives = 50/71 (70%)
Frame = +2
Query: 8 GRQIHSLLVKSPYEFHMYVGSSLLDMYSKAGQFHEAQCVFESLPERDVVSCTAIISGYAQ 187
G+++H+ ++K+ Y +++ + L+ +Y+K +A VF+ +PER+VVS TA+IS Y+Q
Sbjct: 262 GQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPERNVVSWTAMISAYSQ 321
Query: 188 QGFGREALEVF 220
+G+ +AL +F
Sbjct: 322 RGYASQALNLF 332
>ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Glycine max]
Length = 634
Score = 115 bits (288), Expect = 4e-24
Identities = 57/82 (69%), Positives = 66/82 (80%)
Frame = +2
Query: 8 GRQIHSLLVKSPYEFHMYVGSSLLDMYSKAGQFHEAQCVFESLPERDVVSCTAIISGYAQ 187
GRQIHS ++K YE H+YVGSSLLDMY+K G+ HEA+ +F+ LPERDVVSCTAIISGYAQ
Sbjct: 178 GRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQ 237
Query: 188 QGFGREALEVFRLLLREGMGVN 253
G EALE+FR L REGM N
Sbjct: 238 LGLDEEALELFRRLQREGMQSN 259
Score = 69.7 bits (169), Expect = 2e-10
Identities = 32/77 (41%), Positives = 54/77 (70%)
Frame = +2
Query: 8 GRQIHSLLVKSPYEFHMYVGSSLLDMYSKAGQFHEAQCVFESLPERDVVSCTAIISGYAQ 187
G+Q+H+ L++S ++ + +SL+DMYSK G A+ +F++L ER V+S A++ GY++
Sbjct: 279 GKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSK 338
Query: 188 QGFGREALEVFRLLLRE 238
G GRE LE+F L++ E
Sbjct: 339 HGEGREVLELFNLMIDE 355
Score = 64.7 bits (156), Expect = 8e-09
Identities = 31/82 (37%), Positives = 54/82 (65%)
Frame = +2
Query: 8 GRQIHSLLVKSPYEFHMYVGSSLLDMYSKAGQFHEAQCVFESLPERDVVSCTAIISGYAQ 187
G+++H+ ++K+ Y +Y+ + L+ Y K +A+ VF+ +PER+VVS TA+IS Y+Q
Sbjct: 77 GQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMPERNVVSWTAMISAYSQ 136
Query: 188 QGFGREALEVFRLLLREGMGVN 253
+G+ +AL +F +LR G N
Sbjct: 137 RGYASQALSLFVQMLRSGTEPN 158
>ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 114 bits (284), Expect = 1e-23
Identities = 56/82 (68%), Positives = 68/82 (82%)
Frame = +2
Query: 8 GRQIHSLLVKSPYEFHMYVGSSLLDMYSKAGQFHEAQCVFESLPERDVVSCTAIISGYAQ 187
GRQIHSL++K+ +E H++VGSSLLDMY+KAG+ EA+ VF+ LPERDVVSCTAIISGYAQ
Sbjct: 597 GRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQ 656
Query: 188 QGFGREALEVFRLLLREGMGVN 253
G EAL++FR L REGM N
Sbjct: 657 LGLDEEALDLFRRLQREGMRSN 678
Score = 77.0 bits (188), Expect = 1e-12
Identities = 33/77 (42%), Positives = 57/77 (74%)
Frame = +2
Query: 8 GRQIHSLLVKSPYEFHMYVGSSLLDMYSKAGQFHEAQCVFESLPERDVVSCTAIISGYAQ 187
GRQ+HS ++++ F++ + +SL+DMYSK G ++ +F+S+PER V+S A++ GY++
Sbjct: 698 GRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSK 757
Query: 188 QGFGREALEVFRLLLRE 238
G GREA+E+F+L+ E
Sbjct: 758 HGLGREAVELFKLMKEE 774
Score = 67.4 bits (163), Expect = 1e-09
Identities = 32/82 (39%), Positives = 56/82 (68%)
Frame = +2
Query: 8 GRQIHSLLVKSPYEFHMYVGSSLLDMYSKAGQFHEAQCVFESLPERDVVSCTAIISGYAQ 187
G+++H+ ++K+ YE +Y+ + L+ +Y+K +A+ V + +PER+VVS TA+ISGY+Q
Sbjct: 496 GQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQ 555
Query: 188 QGFGREALEVFRLLLREGMGVN 253
+G+ EAL +F +L G N
Sbjct: 556 RGYASEALHLFVEMLMSGTAPN 577
>emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 114 bits (284), Expect = 1e-23
Identities = 56/82 (68%), Positives = 68/82 (82%)
Frame = +2
Query: 8 GRQIHSLLVKSPYEFHMYVGSSLLDMYSKAGQFHEAQCVFESLPERDVVSCTAIISGYAQ 187
GRQIHSL++K+ +E H++VGSSLLDMY+KAG+ EA+ VF+ LPERDVVSCTAIISGYAQ
Sbjct: 130 GRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQ 189
Query: 188 QGFGREALEVFRLLLREGMGVN 253
G EAL++FR L REGM N
Sbjct: 190 LGLDEEALDLFRRLQREGMRSN 211
Score = 77.0 bits (188), Expect = 1e-12
Identities = 33/77 (42%), Positives = 57/77 (74%)
Frame = +2
Query: 8 GRQIHSLLVKSPYEFHMYVGSSLLDMYSKAGQFHEAQCVFESLPERDVVSCTAIISGYAQ 187
GRQ+HS ++++ F++ + +SL+DMYSK G ++ +F+S+PER V+S A++ GY++
Sbjct: 231 GRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSK 290
Query: 188 QGFGREALEVFRLLLRE 238
G GREA+E+F+L+ E
Sbjct: 291 HGLGREAVELFKLMKEE 307
Score = 67.4 bits (163), Expect = 1e-09
Identities = 32/82 (39%), Positives = 56/82 (68%)
Frame = +2
Query: 8 GRQIHSLLVKSPYEFHMYVGSSLLDMYSKAGQFHEAQCVFESLPERDVVSCTAIISGYAQ 187
G+++H+ ++K+ YE +Y+ + L+ +Y+K +A+ V + +PER+VVS TA+ISGY+Q
Sbjct: 29 GQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQ 88
Query: 188 QGFGREALEVFRLLLREGMGVN 253
+G+ EAL +F +L G N
Sbjct: 89 RGYASEALHLFVEMLMSGTAPN 110