BLASTX nr result

ID: Lithospermum22_contig00040329 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00040329
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18552.3| unnamed protein product [Vitis vinifera]               70   2e-10
ref|XP_002266510.1| PREDICTED: SKP1-interacting partner 15 [Viti...    70   2e-10
emb|CAN69669.1| hypothetical protein VITISV_019154 [Vitis vinifera]    70   2e-10
ref|XP_002300927.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002307489.1| f-box family protein [Populus trichocarpa] g...    65   4e-09

>emb|CBI18552.3| unnamed protein product [Vitis vinifera]
          Length = 294

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 34/55 (61%), Positives = 43/55 (78%)
 Frame = -2

Query: 222 MESSPLNLLPQDTLHLIFSNLPLRQIIISKSVCKFLHTTLSSASFQRLFAATQPP 58
           M++SP+  LPQDTLH IFS LPLRQIII +SVCKF + TL++ +F  L  +TQPP
Sbjct: 36  MDASPIYRLPQDTLHYIFSTLPLRQIIICRSVCKFFYQTLTAPAFMELI-STQPP 89


>ref|XP_002266510.1| PREDICTED: SKP1-interacting partner 15 [Vitis vinifera]
          Length = 374

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 34/55 (61%), Positives = 43/55 (78%)
 Frame = -2

Query: 222 MESSPLNLLPQDTLHLIFSNLPLRQIIISKSVCKFLHTTLSSASFQRLFAATQPP 58
           M++SP+  LPQDTLH IFS LPLRQIII +SVCKF + TL++ +F  L  +TQPP
Sbjct: 1   MDASPIYRLPQDTLHYIFSTLPLRQIIICRSVCKFFYQTLTAPAFMELI-STQPP 54


>emb|CAN69669.1| hypothetical protein VITISV_019154 [Vitis vinifera]
          Length = 876

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 34/55 (61%), Positives = 43/55 (78%)
 Frame = -2

Query: 222 MESSPLNLLPQDTLHLIFSNLPLRQIIISKSVCKFLHTTLSSASFQRLFAATQPP 58
           M++SP+  LPQDTLH IFS LPLRQIII +SVCKF + TL++ +F  L  +TQPP
Sbjct: 1   MDASPIYRLPQDTLHYIFSTLPLRQIIICRSVCKFFYQTLTAPAFMELI-STQPP 54


>ref|XP_002300927.1| predicted protein [Populus trichocarpa] gi|222842653|gb|EEE80200.1|
           predicted protein [Populus trichocarpa]
          Length = 376

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 35/55 (63%), Positives = 43/55 (78%)
 Frame = -2

Query: 222 MESSPLNLLPQDTLHLIFSNLPLRQIIISKSVCKFLHTTLSSASFQRLFAATQPP 58
           M+ SP+N LPQDTLH IFS+LPLRQI+I +SVCKF +  L+S SF  L  +TQPP
Sbjct: 1   MDDSPINRLPQDTLHQIFSSLPLRQIMICRSVCKFFNQMLTSPSFVDLI-STQPP 54


>ref|XP_002307489.1| f-box family protein [Populus trichocarpa]
           gi|222856938|gb|EEE94485.1| f-box family protein
           [Populus trichocarpa]
          Length = 374

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 31/54 (57%), Positives = 41/54 (75%)
 Frame = -2

Query: 222 MESSPLNLLPQDTLHLIFSNLPLRQIIISKSVCKFLHTTLSSASFQRLFAATQP 61
           M++SP+N LPQDTL+ IFS+LPLRQI+I +SVCKF +  L+S SF  L +   P
Sbjct: 1   MDASPINRLPQDTLNQIFSSLPLRQIMICRSVCKFFNQMLTSPSFMDLISTQTP 54


Top